RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 SIMC1Q8NDZ2 872 aa10.21□□□□□ -0.77
NEDD9-201ENST00000379433 Q8NFD4 153 aa10.21□□□□□ -0.77
NEDD9-201ENST00000379433 OR2L3Q8NG85 312 aa10.21□□□□□ -0.77
NEDD9-201ENST00000379433 C11orf24Q96F05 449 aaPredicted RBP10.21□□□□□ -0.77
NEDD9-201ENST00000379433 ADAD1Q96M93 576 aaKnown RBP10.21□□□□□ -0.77
NEDD9-201ENST00000379433 CCDC115Q96NT0 180 aa10.21□□□□□ -0.77
NEDD9-201ENST00000379433 TEX12Q9BXU0 123 aa10.21□□□□□ -0.77
NEDD9-201ENST00000379433 KRT84Q9NSB2 600 aa10.21□□□□□ -0.77
NEDD9-201ENST00000379433 RPS6KA6Q9UK32 745 aa10.21□□□□□ -0.77
NEDD9-201ENST00000379433 CACNA1EQ15878 2313 aa10.21□□□□□ -0.77
NEDD9-201ENST00000379433 GPR179Q6PRD1 2367 aa10.21□□□□□ -0.78
NEDD9-201ENST00000379433 LOC100130705A0A1B0GUX0 176 aa10.21□□□□□ -0.78
NEDD9-201ENST00000379433 GPR37L1O60883 481 aa10.21□□□□□ -0.78
NEDD9-201ENST00000379433 CNOT3O75175 753 aaKnown RBP10.21□□□□□ -0.78
NEDD9-201ENST00000379433 CLUP10909 449 aa10.21□□□□□ -0.78
NEDD9-201ENST00000379433 HSD3B1P14060 373 aa10.21□□□□□ -0.78
NEDD9-201ENST00000379433 TNFRSF4P43489 277 aa10.21□□□□□ -0.78
NEDD9-201ENST00000379433 MRPL19P49406 292 aaKnown RBP10.21□□□□□ -0.78
NEDD9-201ENST00000379433 CRYBA2P53672 197 aa10.21□□□□□ -0.78
NEDD9-201ENST00000379433 HOXC5Q00444 222 aa10.21□□□□□ -0.78
NEDD9-201ENST00000379433 RPA4Q13156 261 aa10.21□□□□□ -0.78
NEDD9-201ENST00000379433 PMS2P3Q13401 168 aa10.21□□□□□ -0.78
NEDD9-201ENST00000379433 DCTN2Q13561 401 aaKnown RBP10.21□□□□□ -0.78
NEDD9-201ENST00000379433 LTB4RQ15722 352 aa10.21□□□□□ -0.78
NEDD9-201ENST00000379433 SYPL1Q16563 259 aa10.21□□□□□ -0.78
NEDD9-201ENST00000379433 TMEM236Q5W0B7 351 aa10.21□□□□□ -0.78
NEDD9-201ENST00000379433 CPZQ66K79 652 aa10.21□□□□□ -0.78
NEDD9-201ENST00000379433 WDR73Q6P4I2 378 aa10.21□□□□□ -0.78
NEDD9-201ENST00000379433 TRIM40Q6P9F5 258 aa10.21□□□□□ -0.78
NEDD9-201ENST00000379433 PAGE2Q7Z2X7 111 aa10.21□□□□□ -0.78
NEDD9-201ENST00000379433 GPR141Q7Z602 305 aa10.21□□□□□ -0.78
NEDD9-201ENST00000379433 SERPINA11Q86U17 422 aa10.21□□□□□ -0.78
NEDD9-201ENST00000379433 NKAIN4Q8IVV8 208 aa10.21□□□□□ -0.78
NEDD9-201ENST00000379433 ZNF248Q8NDW4 579 aa10.21□□□□□ -0.78
NEDD9-201ENST00000379433 SETD7Q8WTS6 366 aaKnown RBP10.21□□□□□ -0.78
NEDD9-201ENST00000379433 MAGEB10Q96LZ2 347 aaPredicted RBP10.21□□□□□ -0.78
NEDD9-201ENST00000379433 COL21A1Q96P44 957 aa10.21□□□□□ -0.78
NEDD9-201ENST00000379433 FOXQ1Q9C009 403 aa10.21□□□□□ -0.78
NEDD9-201ENST00000379433 ROGDIQ9GZN7 287 aa10.21□□□□□ -0.78
NEDD9-201ENST00000379433 CNOT11Q9UKZ1 510 aaKnown RBP10.21□□□□□ -0.78
NEDD9-201ENST00000379433 PCDHGA1Q9Y5H4 931 aa10.21□□□□□ -0.78
NEDD9-201ENST00000379433 A6NL46 340 aa10.2□□□□□ -0.78
NEDD9-201ENST00000379433 FOXE1O00358 373 aaPredicted RBP10.2□□□□□ -0.78
NEDD9-201ENST00000379433 BCKDKO14874 412 aa10.2□□□□□ -0.78
NEDD9-201ENST00000379433 VILLO15195 856 aa10.2□□□□□ -0.78
NEDD9-201ENST00000379433 SOX14O95416 240 aa10.2□□□□□ -0.78
NEDD9-201ENST00000379433 NR2F1P10589 423 aa10.2□□□□□ -0.78
NEDD9-201ENST00000379433 BSGP35613 385 aa10.2□□□□□ -0.78
NEDD9-201ENST00000379433 CCT3P49368 545 aaKnown RBP10.2□□□□□ -0.78
NEDD9-201ENST00000379433 DAPP51397 102 aa10.2□□□□□ -0.78
NEDD9-201ENST00000379433 GPR18Q14330 331 aa10.2□□□□□ -0.78
NEDD9-201ENST00000379433 OR4C11Q6IEV9 310 aa10.2□□□□□ -0.78
NEDD9-201ENST00000379433 PRR23BQ6ZRT6 265 aa10.2□□□□□ -0.78
NEDD9-201ENST00000379433 C6orf120Q7Z4R8 191 aa10.2□□□□□ -0.78
NEDD9-201ENST00000379433 RASGRP3Q8IV61 690 aa10.2□□□□□ -0.78
NEDD9-201ENST00000379433 SLC22A18Q96BI1 424 aa10.2□□□□□ -0.78
NEDD9-201ENST00000379433 TAMM41Q96BW9 452 aa10.2□□□□□ -0.78
NEDD9-201ENST00000379433 C16orf58Q96GQ5 468 aa10.2□□□□□ -0.78
NEDD9-201ENST00000379433 WDR92Q96MX6 357 aa10.2□□□□□ -0.78
NEDD9-201ENST00000379433 RBM4BQ9BQ04 359 aaKnown RBP10.2□□□□□ -0.78
NEDD9-201ENST00000379433 RBM4Q9BWF3 364 aaKnown RBP10.2□□□□□ -0.78
NEDD9-201ENST00000379433 IL1RAPQ9NPH3 570 aa10.2□□□□□ -0.78
NEDD9-201ENST00000379433 MTCH2Q9Y6C9 303 aa10.2□□□□□ -0.78
NEDD9-201ENST00000379433 FREM2Q5SZK8 3169 aa10.2□□□□□ -0.78
NEDD9-201ENST00000379433 C1orf226A1L170 272 aa10.2□□□□□ -0.78
NEDD9-201ENST00000379433 LRIT2A6NDA9 550 aa10.2□□□□□ -0.78
NEDD9-201ENST00000379433 TNFRSF11BO00300 401 aa10.2□□□□□ -0.78
NEDD9-201ENST00000379433 ANXA8P13928 327 aa10.2□□□□□ -0.78
NEDD9-201ENST00000379433 PRPH2P23942 346 aa10.2□□□□□ -0.78
NEDD9-201ENST00000379433 PEBP1P30086 187 aaKnown RBP10.2□□□□□ -0.78
NEDD9-201ENST00000379433 SRP54P61011 504 aaKnown RBP10.2□□□□□ -0.78
NEDD9-201ENST00000379433 CD47Q08722 323 aa10.2□□□□□ -0.78
NEDD9-201ENST00000379433 ILF3Q12906 894 aaKnown RBP eCLIP10.2□□□□□ -0.783e-10■■■□□ 16.4
NEDD9-201ENST00000379433 SLC9A5Q14940 896 aa10.2□□□□□ -0.78
NEDD9-201ENST00000379433 KIAA1161Q6NSJ0 714 aa10.2□□□□□ -0.78
NEDD9-201ENST00000379433 PRSS41Q7RTY9 318 aa10.2□□□□□ -0.78
NEDD9-201ENST00000379433 DCP2Q8IU60 420 aaKnown RBP10.2□□□□□ -0.78
NEDD9-201ENST00000379433 ACOT4Q8N9L9 421 aa10.2□□□□□ -0.78
NEDD9-201ENST00000379433 OR56B2PQ8NGI1 322 aa10.2□□□□□ -0.78
NEDD9-201ENST00000379433 OR6S1Q8NH40 331 aa10.2□□□□□ -0.78
NEDD9-201ENST00000379433 MOSPD2Q8NHP6 518 aa10.2□□□□□ -0.78
NEDD9-201ENST00000379433 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.2□□□□□ -0.78
NEDD9-201ENST00000379433 ADAM19Q9H013 955 aa10.2□□□□□ -0.78
NEDD9-201ENST00000379433 ZNF696Q9H7X3 374 aa10.2□□□□□ -0.78
NEDD9-201ENST00000379433 IL21RQ9HBE5 538 aa10.2□□□□□ -0.78
NEDD9-201ENST00000379433 LHX9Q9NQ69 397 aa10.2□□□□□ -0.78
NEDD9-201ENST00000379433 C3orf18Q9UK00 162 aa10.2□□□□□ -0.78
NEDD9-201ENST00000379433 GMPPBQ9Y5P6 360 aa10.2□□□□□ -0.78
NEDD9-201ENST00000379433 RNASET2O00584 256 aaKnown RBP10.2□□□□□ -0.78
NEDD9-201ENST00000379433 AP1G1O43747 822 aa10.2□□□□□ -0.78
NEDD9-201ENST00000379433 HNRNPA2B1P22626 353 aaKnown RBP10.2□□□□□ -0.78
NEDD9-201ENST00000379433 MYF6P23409 242 aa10.2□□□□□ -0.78
NEDD9-201ENST00000379433 BUD31P41223 144 aaPredicted RBP10.2□□□□□ -0.78
NEDD9-201ENST00000379433 PIK3CBP42338 1070 aa10.2□□□□□ -0.78
NEDD9-201ENST00000379433 SLC26A5P58743 744 aa10.2□□□□□ -0.78
NEDD9-201ENST00000379433 DBPQ10586 325 aaPredicted RBP10.2□□□□□ -0.78
NEDD9-201ENST00000379433 CTU2Q2VPK5 515 aaKnown RBP10.2□□□□□ -0.78
NEDD9-201ENST00000379433 LEXMQ3ZCV2 418 aa10.2□□□□□ -0.78
NEDD9-201ENST00000379433 GPAT3Q53EU6 434 aa10.2□□□□□ -0.78
NEDD9-201ENST00000379433 Q7L0L9 218 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms