RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 GIN1Q9NXP7 522 aa16.23■□□□□ 0.19
THUMPD2-201ENST00000378727 CLDN16Q9Y5I7 305 aa16.23■□□□□ 0.19
THUMPD2-201ENST00000378727 A0A0G2JPF8 293 aa16.23■□□□□ 0.19
THUMPD2-201ENST00000378727 HNRNPCL2B2RXH8 293 aa16.23■□□□□ 0.19
THUMPD2-201ENST00000378727 HNRNPCL3B7ZW38 293 aa16.23■□□□□ 0.19
THUMPD2-201ENST00000378727 SEMA7AO75326 666 aa16.23■□□□□ 0.19
THUMPD2-201ENST00000378727 CDC123O75794 336 aaPredicted RBP16.23■□□□□ 0.19
THUMPD2-201ENST00000378727 ZIC2O95409 532 aaPredicted RBP16.23■□□□□ 0.19
THUMPD2-201ENST00000378727 IFNW1P05000 195 aa16.23■□□□□ 0.19
THUMPD2-201ENST00000378727 SLC35E2P0CK97 266 aa16.23■□□□□ 0.19
THUMPD2-201ENST00000378727 HNRNPCL4P0DMR1 293 aa16.23■□□□□ 0.19
THUMPD2-201ENST00000378727 ACP2P11117 423 aa16.23■□□□□ 0.19
THUMPD2-201ENST00000378727 FOLR1P15328 257 aa16.23■□□□□ 0.19
THUMPD2-201ENST00000378727 KCNAB2Q13303 367 aa16.23■□□□□ 0.19
THUMPD2-201ENST00000378727 GNA13Q14344 377 aa16.23■□□□□ 0.19
THUMPD2-201ENST00000378727 NR0B2Q15466 257 aa16.23■□□□□ 0.19
THUMPD2-201ENST00000378727 FAM214AQ32MH5 1076 aa16.23■□□□□ 0.19
THUMPD2-201ENST00000378727 EXOSC6Q5RKV6 272 aaKnown RBP16.23■□□□□ 0.19
THUMPD2-201ENST00000378727 PERM1Q5SV97 790 aa16.23■□□□□ 0.19
THUMPD2-201ENST00000378727 PRAMEF8Q5VWM4 474 aa16.23■□□□□ 0.19
THUMPD2-201ENST00000378727 PRAMEF7Q5VXH5 474 aa16.23■□□□□ 0.19
THUMPD2-201ENST00000378727 KRT73Q86Y46 540 aa16.23■□□□□ 0.19
THUMPD2-201ENST00000378727 OR1L3Q8NH93 324 aa16.23■□□□□ 0.19
THUMPD2-201ENST00000378727 PROX1Q92786 737 aa16.23■□□□□ 0.19
THUMPD2-201ENST00000378727 CDS1Q92903 461 aa16.23■□□□□ 0.19
THUMPD2-201ENST00000378727 ZNF354BQ96LW1 612 aa16.23■□□□□ 0.19
THUMPD2-201ENST00000378727 PIP5K1AQ99755 562 aa16.23■□□□□ 0.19
THUMPD2-201ENST00000378727 BTBD2Q9BX70 525 aa16.23■□□□□ 0.19
THUMPD2-201ENST00000378727 QRSL1Q9H0R6 528 aaKnown RBP16.23■□□□□ 0.19
THUMPD2-201ENST00000378727 LIPT1Q9Y234 373 aa16.23■□□□□ 0.19
THUMPD2-201ENST00000378727 DSPPQ9NZW4 1301 aa16.22■□□□□ 0.19
THUMPD2-201ENST00000378727 SPEGQ15772 3267 aa16.22■□□□□ 0.19
THUMPD2-201ENST00000378727 CPED1A4D0V7 1026 aa16.22■□□□□ 0.19
THUMPD2-201ENST00000378727 OR2W5A6NFC9 320 aa16.22■□□□□ 0.19
THUMPD2-201ENST00000378727 TNFRSF11BO00300 401 aa16.22■□□□□ 0.19
THUMPD2-201ENST00000378727 FFAR1O14842 300 aa16.22■□□□□ 0.19
THUMPD2-201ENST00000378727 SLITRK5O94991 958 aa16.22■□□□□ 0.19
THUMPD2-201ENST00000378727 EPPINO95925 133 aa16.22■□□□□ 0.19
THUMPD2-201ENST00000378727 PNLIPP16233 465 aa16.22■□□□□ 0.19
THUMPD2-201ENST00000378727 IGFBP5P24593 272 aa16.22■□□□□ 0.19
THUMPD2-201ENST00000378727 AVPR1BP47901 424 aa16.22■□□□□ 0.19
THUMPD2-201ENST00000378727 ARL4DP49703 201 aa16.22■□□□□ 0.19
THUMPD2-201ENST00000378727 CDH12P55289 794 aa16.22■□□□□ 0.19
THUMPD2-201ENST00000378727 BTG2P78543 158 aa16.22■□□□□ 0.19
THUMPD2-201ENST00000378727 SPIBQ01892 262 aa16.22■□□□□ 0.19
THUMPD2-201ENST00000378727 CHRNEQ04844 493 aa16.22■□□□□ 0.19
THUMPD2-201ENST00000378727 SLC13A2Q13183 592 aa16.22■□□□□ 0.19
THUMPD2-201ENST00000378727 EXOSC7Q15024 291 aaKnown RBP16.22■□□□□ 0.19
THUMPD2-201ENST00000378727 DUSP5Q16690 384 aa16.22■□□□□ 0.19
THUMPD2-201ENST00000378727 FAHD1Q6P587 224 aa16.22■□□□□ 0.19
THUMPD2-201ENST00000378727 RASSF5Q8WWW0 418 aa16.22■□□□□ 0.19
THUMPD2-201ENST00000378727 SLC9A6Q92581 669 aa16.22■□□□□ 0.19
THUMPD2-201ENST00000378727 MUS81Q96NY9 551 aa16.22■□□□□ 0.19
THUMPD2-201ENST00000378727 TRNT1Q96Q11 434 aaKnown RBP16.22■□□□□ 0.19
THUMPD2-201ENST00000378727 ADAP2Q9NPF8 381 aa16.22■□□□□ 0.19
THUMPD2-201ENST00000378727 CUTCQ9NTM9 273 aa16.22■□□□□ 0.19
THUMPD2-201ENST00000378727 ACER3Q9NUN7 267 aa16.22■□□□□ 0.19
THUMPD2-201ENST00000378727 PDP2Q9P2J9 529 aa16.22■□□□□ 0.19
THUMPD2-201ENST00000378727 C3orf18Q9UK00 162 aa16.22■□□□□ 0.19
THUMPD2-201ENST00000378727 DUXAA6NLW8 204 aa16.22■□□□□ 0.19
THUMPD2-201ENST00000378727 H0YIG0 161 aa16.22■□□□□ 0.19
THUMPD2-201ENST00000378727 CTNSO60931 367 aa16.22■□□□□ 0.19
THUMPD2-201ENST00000378727 IFI6P09912 130 aa16.22■□□□□ 0.19
THUMPD2-201ENST00000378727 RHCEP18577 417 aa16.22■□□□□ 0.19
THUMPD2-201ENST00000378727 POLR2IP36954 125 aaKnown RBP16.22■□□□□ 0.19
THUMPD2-201ENST00000378727 GCGRP47871 477 aa16.22■□□□□ 0.19
THUMPD2-201ENST00000378727 PDX1P52945 283 aa16.22■□□□□ 0.19
THUMPD2-201ENST00000378727 IGLV3-21P80748 117 aaPredicted RBP16.22■□□□□ 0.19
THUMPD2-201ENST00000378727 EPS8Q12929 822 aa16.22■□□□□ 0.19
THUMPD2-201ENST00000378727 PRAMEF17Q5VTA0 474 aa16.22■□□□□ 0.19
THUMPD2-201ENST00000378727 ZNF574Q6ZN55 896 aaPredicted RBP16.22■□□□□ 0.19
THUMPD2-201ENST00000378727 C16orf62Q7Z3J2 963 aa16.22■□□□□ 0.19
THUMPD2-201ENST00000378727 GALNT5Q7Z7M9 940 aa16.22■□□□□ 0.19
THUMPD2-201ENST00000378727 RBM45Q8IUH3 476 aaKnown RBP16.22■□□□□ 0.19
THUMPD2-201ENST00000378727 LACC1Q8IV20 430 aa16.22■□□□□ 0.19
THUMPD2-201ENST00000378727 ZNF595Q8IYB9 648 aa16.22■□□□□ 0.19
THUMPD2-201ENST00000378727 ST13P4Q8IZP2 240 aaPredicted RBP16.22■□□□□ 0.19
THUMPD2-201ENST00000378727 OR51Q1Q8NH59 317 aa16.22■□□□□ 0.19
THUMPD2-201ENST00000378727 OR52J3Q8NH60 311 aa16.22■□□□□ 0.19
THUMPD2-201ENST00000378727 ZG16BQ96DA0 208 aa16.22■□□□□ 0.19
THUMPD2-201ENST00000378727 CLK4Q9HAZ1 481 aaKnown RBP16.22■□□□□ 0.19
THUMPD2-201ENST00000378727 ATXN7L1Q9ULK2 861 aaPredicted RBP16.22■□□□□ 0.19
THUMPD2-201ENST00000378727 MAU2Q9Y6X3 613 aa16.22■□□□□ 0.19
THUMPD2-201ENST00000378727 EME2A4GXA9 379 aaPredicted RBP16.21■□□□□ 0.19
THUMPD2-201ENST00000378727 A8MVJ9 347 aa16.21■□□□□ 0.19
THUMPD2-201ENST00000378727 H3BNH8 94 aa16.21■□□□□ 0.19
THUMPD2-201ENST00000378727 HYAL3O43820 417 aaPredicted RBP16.21■□□□□ 0.19
THUMPD2-201ENST00000378727 FCMRO60667 390 aa16.21■□□□□ 0.19
THUMPD2-201ENST00000378727 LIMS1P48059 325 aa16.21■□□□□ 0.19
THUMPD2-201ENST00000378727 GANABQ14697 944 aaKnown RBP16.21■□□□□ 0.19
THUMPD2-201ENST00000378727 RFX4Q33E94 735 aa16.21■□□□□ 0.19
THUMPD2-201ENST00000378727 ATAD3BQ5T9A4 648 aa16.21■□□□□ 0.19
THUMPD2-201ENST00000378727 FAM181AQ8N9Y4 354 aa16.21■□□□□ 0.19
THUMPD2-201ENST00000378727 ADAMTS18Q8TE60 1221 aa16.21■□□□□ 0.19
THUMPD2-201ENST00000378727 ZNF768Q9H5H4 540 aaKnown RBP16.21■□□□□ 0.19
THUMPD2-201ENST00000378727 PRTFDC1Q9NRG1 225 aa16.21■□□□□ 0.19
THUMPD2-201ENST00000378727 KCND3Q9UK17 655 aa16.21■□□□□ 0.19
THUMPD2-201ENST00000378727 MRPS33Q9Y291 106 aaKnown RBP16.21■□□□□ 0.19
THUMPD2-201ENST00000378727 FAM32AQ9Y421 112 aaKnown RBP16.21■□□□□ 0.19
THUMPD2-201ENST00000378727 BLACEA4D250 179 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms