RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 TRPV4Q9HBA0 871 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 SLC22A14Q9Y267 594 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 CFAP65Q6ZU64 1925 aaKnown RBP4.69□□□□□ -1.66
PCDH9-201ENST00000377861 GP1BAP07359 652 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 SPOCK1Q08629 439 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 TMEM65Q6PI78 240 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 CXCL14O95715 111 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 ZNF252P-AS1Q0IIN9 211 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 DUSP8Q13202 625 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 TMEM246Q9BRR3 403 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 C12orf4Q9NQ89 552 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 UMAD1C9J7I0 102 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 SOAT1P35610 550 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 ATCAYQ86WG3 371 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 ANKRD53Q8N9V6 530 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 PCDHGA1Q9Y5H4 931 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 TBC1D3IA0A087WXS9 549 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 LRRC14BA6NHZ5 514 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 MID1O15344 667 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 MITFO75030 526 aaPredicted RBP4.69□□□□□ -1.66
PCDH9-201ENST00000377861 DYNC2LI1Q8TCX1 351 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 IL36AQ9UHA7 158 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 TMEM218A2RU14 115 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 CERS4Q9HA82 394 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 RP2O75695 350 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 AKT2P31751 481 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 ENTPD1P49961 510 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 METRNLQ641Q3 311 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 TXNRD3NBQ6F5E7 133 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 NANOGP1Q8N7R0 232 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 MYOCQ99972 504 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 WDR26Q9H7D7 661 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 FAM212BQ9NTI7 297 aaPredicted RBP4.69□□□□□ -1.66
PCDH9-201ENST00000377861 PGCP20142 388 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 LBX1P52954 281 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 RPP30P78346 268 aaKnown RBP4.69□□□□□ -1.66
PCDH9-201ENST00000377861 PUM1Q14671 1186 aaKnown RBP eCLIP4.69□□□□□ -1.66
PCDH9-201ENST00000377861 FAM162BQ5T6X4 162 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 UBQLN4Q9NRR5 601 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 COPS7AQ9UBW8 275 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 CEP68Q76N32 757 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 SEC61A2Q9H9S3 476 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 CTPS2Q9NRF8 586 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 DLGAP4Q9Y2H0 992 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 SNAPINO95295 136 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 PIGAP37287 484 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 RAB4BP61018 213 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 SLC3A1Q07837 685 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 GNMTQ14749 295 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 TBC1D25Q3MII6 688 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 DCXRQ7Z4W1 244 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 ZNF595Q8IYB9 648 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 SLC37A3Q8NCC5 494 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 AHCYL2Q96HN2 611 aaKnown RBP4.69□□□□□ -1.66
PCDH9-201ENST00000377861 LRR1Q96L50 414 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 PHB2Q99623 299 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 ABCG4Q9H172 646 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 ZFP14Q9HCL3 533 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 MT-CYBP00156 380 aaPredicted RBP4.69□□□□□ -1.66
PCDH9-201ENST00000377861 ALPPL2P10696 532 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 RBMS2Q15434 407 aaKnown RBP4.69□□□□□ -1.66
PCDH9-201ENST00000377861 TAF13Q15543 124 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 RNF212Q495C1 297 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 C1orf53Q5VUE5 145 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 CNKSR3Q6P9H4 555 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 JAZF1Q86VZ6 243 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 COPS5Q92905 334 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 FOXJ1Q92949 421 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 SAT2Q96F10 170 aaPredicted RBP4.69□□□□□ -1.66
PCDH9-201ENST00000377861 GFM1Q96RP9 751 aaKnown RBP4.69□□□□□ -1.66
PCDH9-201ENST00000377861 P2RY12Q9H244 342 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 GTF2F2P13984 249 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 C1QTNF8P60827 252 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 SSX9Q7RTT3 188 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 TMEM151AQ8N4L1 468 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 FAM216AQ8WUB2 273 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 SACM1LQ9NTJ5 587 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 PARPBPQ9NWS1 579 aa4.69□□□□□ -1.66
PCDH9-201ENST00000377861 OR4F21O95013 312 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 CD68P34810 354 aaPredicted RBP4.68□□□□□ -1.66
PCDH9-201ENST00000377861 MRPL49Q13405 166 aaKnown RBP4.68□□□□□ -1.66
PCDH9-201ENST00000377861 KIAA0513O60268 411 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 FZD6O60353 706 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 DCTDP32321 178 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 DUSP19Q8WTR2 217 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 NDUFAF4Q9P032 175 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 DNAJB11Q9UBS4 358 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 WDR45Q9Y484 360 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 MYOM1P52179 1685 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 C2orf92A0A1B0GVN3 265 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 ARPC3O15145 178 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 SYN1P17600 705 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 USB1Q9BQ65 265 aaKnown RBP4.68□□□□□ -1.66
PCDH9-201ENST00000377861 SLC22A5O76082 557 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 H2AFB2P0C5Z0 115 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 NPR2P20594 1047 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 PCBD1P61457 104 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 GINS1Q14691 196 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 PLA1AQ53H76 456 aa4.68□□□□□ -1.66
PCDH9-201ENST00000377861 TPGS1Q6ZTW0 290 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms