RNA–Protein interactions for RNA: ENST00000376646.3

VPS13A-206, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5 BASIC

Gene VPS13A, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-206ENST00000376646 KCNK16Q96T55 309 aa1.66□□□□□ -2.14
VPS13A-206ENST00000376646 SLITRK2Q9H156 845 aa1.66□□□□□ -2.14
VPS13A-206ENST00000376646 RWDD1Q9H446 243 aaPredicted RBP1.66□□□□□ -2.14
VPS13A-206ENST00000376646 MOB1AQ9H8S9 216 aa1.66□□□□□ -2.14
VPS13A-206ENST00000376646 TAS2R16Q9NYV7 291 aa1.66□□□□□ -2.14
VPS13A-206ENST00000376646 THYN1Q9P016 225 aa1.66□□□□□ -2.14
VPS13A-206ENST00000376646 PRO0461Q9UI25 63 aa1.66□□□□□ -2.14
VPS13A-206ENST00000376646 VSIG4Q9Y279 399 aa1.66□□□□□ -2.14
VPS13A-206ENST00000376646 MTF2Q9Y483 593 aaPredicted RBP1.66□□□□□ -2.14
VPS13A-206ENST00000376646 AUP1Q9Y679 476 aa1.66□□□□□ -2.14
VPS13A-206ENST00000376646 AHNAK2Q8IVF2 5795 aa1.66□□□□□ -2.14
VPS13A-206ENST00000376646 ATP8B3O60423 1300 aa1.66□□□□□ -2.14
VPS13A-206ENST00000376646 AFF2P51816 1311 aa1.66□□□□□ -2.14
VPS13A-206ENST00000376646 FAM205AQ6ZU69 1335 aa1.66□□□□□ -2.14
VPS13A-206ENST00000376646 ARPC1BO15143 372 aaKnown RBP1.66□□□□□ -2.14
VPS13A-206ENST00000376646 RTL8CO15255 209 aa1.66□□□□□ -2.14
VPS13A-206ENST00000376646 AKR7A3O95154 331 aa1.66□□□□□ -2.14
VPS13A-206ENST00000376646 OAS1P00973 400 aaKnown RBP1.66□□□□□ -2.14
VPS13A-206ENST00000376646 DNAJB1P25685 340 aa1.66□□□□□ -2.14
VPS13A-206ENST00000376646 MAT2AP31153 395 aaKnown RBP1.66□□□□□ -2.14
VPS13A-206ENST00000376646 ASMTP46597 345 aa1.66□□□□□ -2.14
VPS13A-206ENST00000376646 SLC6A8P48029 635 aa1.66□□□□□ -2.14
VPS13A-206ENST00000376646 HTD2P86397 168 aa1.66□□□□□ -2.14
VPS13A-206ENST00000376646 FUT7Q11130 342 aa1.66□□□□□ -2.14
VPS13A-206ENST00000376646 SNX1Q13596 522 aa1.66□□□□□ -2.14
VPS13A-206ENST00000376646 PDIA5Q14554 519 aa1.66□□□□□ -2.14
VPS13A-206ENST00000376646 RFTN1Q14699 578 aaPredicted RBP1.66□□□□□ -2.14
VPS13A-206ENST00000376646 SIX1Q15475 284 aaPredicted RBP1.66□□□□□ -2.14
VPS13A-206ENST00000376646 INAQ16352 499 aa1.66□□□□□ -2.14
VPS13A-206ENST00000376646 DNAJC21Q5F1R6 531 aaKnown RBP1.66□□□□□ -2.14
VPS13A-206ENST00000376646 WDR25Q64LD2 544 aaPredicted RBP1.66□□□□□ -2.14
VPS13A-206ENST00000376646 CATSPER4Q7RTX7 472 aa1.66□□□□□ -2.14
VPS13A-206ENST00000376646 NUFIP2Q7Z417 695 aaKnown RBP1.66□□□□□ -2.14
VPS13A-206ENST00000376646 GPR142Q7Z601 462 aa1.66□□□□□ -2.14
VPS13A-206ENST00000376646 PYROXD2Q8N2H3 581 aa1.66□□□□□ -2.14
VPS13A-206ENST00000376646 MLKLQ8NB16 471 aa1.66□□□□□ -2.14
VPS13A-206ENST00000376646 COLGALT1Q8NBJ5 622 aa1.66□□□□□ -2.14
VPS13A-206ENST00000376646 MINDY2Q8NBR6 621 aa1.66□□□□□ -2.14
VPS13A-206ENST00000376646 OR56B1Q8NGI3 324 aa1.66□□□□□ -2.14
VPS13A-206ENST00000376646 DQX1Q8TE96 717 aaKnown RBP1.66□□□□□ -2.14
VPS13A-206ENST00000376646 TAF4BQ92750 862 aa1.66□□□□□ -2.14
VPS13A-206ENST00000376646 RAB3CQ96E17 227 aa1.66□□□□□ -2.14
VPS13A-206ENST00000376646 FAM124BQ9H5Z6 455 aaPredicted RBP1.66□□□□□ -2.14
VPS13A-206ENST00000376646 JPT2Q9H910 190 aa1.66□□□□□ -2.14
VPS13A-206ENST00000376646 ROPN1Q9HAT0 212 aaPredicted RBP1.66□□□□□ -2.14
VPS13A-206ENST00000376646 IL1RL2Q9HB29 575 aa1.66□□□□□ -2.14
VPS13A-206ENST00000376646 NRN1Q9NPD7 142 aa1.66□□□□□ -2.14
VPS13A-206ENST00000376646 YAE1D1Q9NRH1 226 aa1.66□□□□□ -2.14
VPS13A-206ENST00000376646 HPF1Q9NWY4 346 aa1.66□□□□□ -2.14
VPS13A-206ENST00000376646 TUBGCP4Q9UGJ1 667 aa1.66□□□□□ -2.14
VPS13A-206ENST00000376646 ABCC4O15439 1325 aa1.66□□□□□ -2.14
VPS13A-206ENST00000376646 TEX48A0A1B0GUV7 120 aa1.65□□□□□ -2.14
VPS13A-206ENST00000376646 RPL37AP8A6NKH3 93 aa1.65□□□□□ -2.14
VPS13A-206ENST00000376646 CFLARO15519 480 aa1.65□□□□□ -2.14
VPS13A-206ENST00000376646 TRIM16O95361 564 aa1.65□□□□□ -2.14
VPS13A-206ENST00000376646 CCDC159P0C7I6 412 aa1.65□□□□□ -2.14
VPS13A-206ENST00000376646 RALAP11233 206 aa1.65□□□□□ -2.14
VPS13A-206ENST00000376646 MATKP42679 507 aa1.65□□□□□ -2.14
VPS13A-206ENST00000376646 NUMBP49757 651 aa1.65□□□□□ -2.14
VPS13A-206ENST00000376646 GPC3P51654 580 aa1.65□□□□□ -2.14
VPS13A-206ENST00000376646 RIDAP52758 137 aaKnown RBP1.65□□□□□ -2.14
VPS13A-206ENST00000376646 MTTPP55157 894 aa1.65□□□□□ -2.14
VPS13A-206ENST00000376646 ZNF699Q32M78 642 aa1.65□□□□□ -2.14
VPS13A-206ENST00000376646 C12orf60Q5U649 245 aa1.65□□□□□ -2.14
VPS13A-206ENST00000376646 RHBDD2Q6NTF9 364 aa1.65□□□□□ -2.14
VPS13A-206ENST00000376646 CWC27Q6UX04 472 aaKnown RBP1.65□□□□□ -2.14
VPS13A-206ENST00000376646 OLFM4Q6UX06 510 aa1.65□□□□□ -2.14
VPS13A-206ENST00000376646 UNC5DQ6UXZ4 953 aa1.65□□□□□ -2.14
VPS13A-206ENST00000376646 DPY19L2P2Q6ZN68 376 aa1.65□□□□□ -2.14
VPS13A-206ENST00000376646 SYVN1Q86TM6 617 aa1.65□□□□□ -2.14
VPS13A-206ENST00000376646 ADCK1Q86TW2 530 aa1.65□□□□□ -2.14
VPS13A-206ENST00000376646 LUZP1Q86V48 1076 aa1.65□□□□□ -2.14
VPS13A-206ENST00000376646 CATSPER3Q86XQ3 398 aa1.65□□□□□ -2.14
VPS13A-206ENST00000376646 RNF130Q86XS8 419 aa1.65□□□□□ -2.14
VPS13A-206ENST00000376646 GPD1LQ8N335 351 aa1.65□□□□□ -2.14
VPS13A-206ENST00000376646 Q8N7P7 452 aa1.65□□□□□ -2.14
VPS13A-206ENST00000376646 SAMD12Q8N8I0 201 aa1.65□□□□□ -2.14
VPS13A-206ENST00000376646 FAM71CQ8NEG0 241 aa1.65□□□□□ -2.14
VPS13A-206ENST00000376646 ZNF397Q8NF99 534 aaPredicted RBP1.65□□□□□ -2.14
VPS13A-206ENST00000376646 U2AF1L4Q8WU68 220 aaKnown RBP1.65□□□□□ -2.14
VPS13A-206ENST00000376646 RSPH1Q8WYR4 309 aa1.65□□□□□ -2.14
VPS13A-206ENST00000376646 CCDC51Q96ER9 411 aa1.65□□□□□ -2.14
VPS13A-206ENST00000376646 C14orf79Q96F83 325 aa1.65□□□□□ -2.14
VPS13A-206ENST00000376646 HSD17B14Q9BPX1 270 aa1.65□□□□□ -2.14
VPS13A-206ENST00000376646 NDUFAF3Q9BU61 184 aa1.65□□□□□ -2.14
VPS13A-206ENST00000376646 NMNAT2Q9BZQ4 307 aa1.65□□□□□ -2.14
VPS13A-206ENST00000376646 LRRCC1Q9C099 1032 aa1.65□□□□□ -2.14
VPS13A-206ENST00000376646 SP140LQ9H930 580 aa1.65□□□□□ -2.14
VPS13A-206ENST00000376646 ACTR8Q9H981 624 aa1.65□□□□□ -2.14
VPS13A-206ENST00000376646 LIN28AQ9H9Z2 209 aaKnown RBP1.65□□□□□ -2.14
VPS13A-206ENST00000376646 Q9HAA7 133 aa1.65□□□□□ -2.14
VPS13A-206ENST00000376646 ADGRL4Q9HBW9 690 aa1.65□□□□□ -2.14
VPS13A-206ENST00000376646 TAS2R3Q9NYW6 316 aa1.65□□□□□ -2.14
VPS13A-206ENST00000376646 BCAP29Q9UHQ4 241 aa1.65□□□□□ -2.14
VPS13A-206ENST00000376646 MGAT4AQ9UM21 535 aa1.65□□□□□ -2.14
VPS13A-206ENST00000376646 A0A0A6YYD4 124 aa1.65□□□□□ -2.15
VPS13A-206ENST00000376646 A0A1W2PQ72 361 aa1.65□□□□□ -2.15
VPS13A-206ENST00000376646 H3BMH7 237 aa1.65□□□□□ -2.15
VPS13A-206ENST00000376646 LGALS8O00214 317 aa1.65□□□□□ -2.15
VPS13A-206ENST00000376646 RANBP6O60518 1105 aaKnown RBP1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms