RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 KRTCAP2Q8N6L1 136 aa11.92□□□□□ -0.5
VPS13A-204ENST00000376634 GATSQ8NAP1 163 aa11.92□□□□□ -0.5
VPS13A-204ENST00000376634 MSLNLQ96KJ4 702 aa11.92□□□□□ -0.5
VPS13A-204ENST00000376634 DOCK2Q92608 1830 aa11.92□□□□□ -0.5
VPS13A-204ENST00000376634 ZNF860A6NHJ4 632 aa11.92□□□□□ -0.5
VPS13A-204ENST00000376634 GDF5P43026 501 aa11.92□□□□□ -0.5
VPS13A-204ENST00000376634 PRKCZQ05513 592 aa11.92□□□□□ -0.5
VPS13A-204ENST00000376634 GK2Q14410 553 aaPredicted RBP11.92□□□□□ -0.5
VPS13A-204ENST00000376634 LAPTM4AQ15012 233 aa11.92□□□□□ -0.5
VPS13A-204ENST00000376634 MAGED1Q9Y5V3 778 aaPredicted RBP11.92□□□□□ -0.5
VPS13A-204ENST00000376634 C17orf113A0A1B0GUU1 675 aa11.92□□□□□ -0.5
VPS13A-204ENST00000376634 RTCAO00442 366 aaKnown RBP11.92□□□□□ -0.5
VPS13A-204ENST00000376634 KDELR3O43731 214 aa11.92□□□□□ -0.5
VPS13A-204ENST00000376634 OR2B3O76000 313 aa11.92□□□□□ -0.5
VPS13A-204ENST00000376634 GCGRP47871 477 aa11.92□□□□□ -0.5
VPS13A-204ENST00000376634 TGFBIQ15582 683 aa11.92□□□□□ -0.5
VPS13A-204ENST00000376634 NAT8LQ8N9F0 302 aa11.92□□□□□ -0.5
VPS13A-204ENST00000376634 CYP8B1Q9UNU6 501 aa11.92□□□□□ -0.5
VPS13A-204ENST00000376634 MAOAP21397 527 aa11.92□□□□□ -0.5
VPS13A-204ENST00000376634 CYCSP99999 105 aaKnown RBP11.92□□□□□ -0.5
VPS13A-204ENST00000376634 CLDN19Q8N6F1 224 aa11.92□□□□□ -0.5
VPS13A-204ENST00000376634 OR8U9P0C7N5 309 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 ACVR1BP36896 505 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 PTCHD3Q3KNS1 767 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 CSNK1A1LQ8N752 337 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 OR9I1Q8NGQ6 314 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 OARD1Q9Y530 152 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 NME7Q9Y5B8 376 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 SLC22A31A6NKX4 558 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 CLN5O75503 358 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 EEDO75530 441 aaKnown RBP11.91□□□□□ -0.5
VPS13A-204ENST00000376634 PTPN6P29350 595 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 OR4D2P58180 307 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 PXYLP1Q8TE99 480 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 HS6ST2Q96MM7 605 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 HIPK2Q9H2X6 1198 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 EFCAB7A8K855 629 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 PCDH17O14917 1159 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 UCHL1P09936 223 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 ZNF136P52737 540 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 KDELC1Q6UW63 502 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 TRIB2Q92519 343 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 LRCH3Q96II8 777 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 FOLH1BQ9HBA9 442 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 C14orf119Q9NWQ9 140 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 F8W036 122 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 INPPL1O15357 1258 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 CRTAPO75718 401 aaPredicted RBP11.91□□□□□ -0.5
VPS13A-204ENST00000376634 HLA-EP13747 358 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 ZNF182P17025 639 aaPredicted RBP11.91□□□□□ -0.5
VPS13A-204ENST00000376634 ACRV1P26436 265 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 BLOC1S1P78537 153 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 EIF2B1Q14232 305 aaKnown RBP11.91□□□□□ -0.5
VPS13A-204ENST00000376634 GRM2Q14416 872 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 HORMAD2Q8N7B1 307 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 OR4K1Q8NGD4 311 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 OR9K2Q8NGE7 335 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.91□□□□□ -0.52e-6■■□□□ 14.1
VPS13A-204ENST00000376634 TCEAL7Q9BRU2 100 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 SAMD10Q9BYL1 202 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 SPATA6Q9NWH7 488 aaPredicted RBP11.91□□□□□ -0.5
VPS13A-204ENST00000376634 MED12Q93074 2177 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 ZNF705FA8MVS1 300 aaPredicted RBP11.91□□□□□ -0.5
VPS13A-204ENST00000376634 ZNF705DP0CH99 300 aaPredicted RBP11.91□□□□□ -0.5
VPS13A-204ENST00000376634 ZNF705BP0CI00 300 aaPredicted RBP11.91□□□□□ -0.5
VPS13A-204ENST00000376634 NDUFV2P19404 249 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 BDKRB2P30411 391 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 MAP2K4P45985 399 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 MAP2K3P46734 347 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 SERINC3Q13530 473 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 SYPL2Q5VXT5 272 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 DNAJA3Q96EY1 480 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 FAM46AQ96IP4 442 aaKnown RBP11.91□□□□□ -0.5
VPS13A-204ENST00000376634 CCDC106Q9BWC9 280 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 PPA2Q9H2U2 334 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 GCM1Q9NP62 436 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 NLE1Q9NVX2 485 aaPredicted RBP11.91□□□□□ -0.5
VPS13A-204ENST00000376634 HIF1ANQ9NWT6 349 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 ACSL6Q9UKU0 697 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 CHATP28329 748 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 NSDHLQ15738 373 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 MS4A13Q5J8X5 152 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 SCRN2Q96FV2 425 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 SMG9Q9H0W8 520 aaKnown RBP11.91□□□□□ -0.5
VPS13A-204ENST00000376634 DZANK1Q9NVP4 752 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 TMEM248Q9NWD8 314 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 FTSJ1Q9UET6 329 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 BOLA2-SMG1P6H3BVE0 249 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 PRKYO43930 277 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 PPP1R8Q12972 351 aaKnown RBP11.91□□□□□ -0.5
VPS13A-204ENST00000376634 GRASPQ7Z6J2 395 aaPredicted RBP11.91□□□□□ -0.5
VPS13A-204ENST00000376634 CMTM8Q8IZV2 173 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 SRA1Q9HD15 236 aaKnown RBP11.91□□□□□ -0.5
VPS13A-204ENST00000376634 ACVRL1P37023 503 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 CCDC116Q8IYX3 515 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 SGCZQ96LD1 299 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 KDM3BQ7LBC6 1761 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 MRC1P22897 1456 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 LRRTM2O43300 516 aa11.91□□□□□ -0.5
VPS13A-204ENST00000376634 EXOC3L2Q2M3D2 409 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms