RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 GXYLT1Q4G148 440 aa11.23□□□□□ -0.61
LSM2-208ENST00000375661 C6orf136Q5SQH8 315 aa11.23□□□□□ -0.61
LSM2-208ENST00000375661 FAM47EQ6ZV65 393 aa11.23□□□□□ -0.61
LSM2-208ENST00000375661 MDGA2Q7Z553 956 aa11.23□□□□□ -0.61
LSM2-208ENST00000375661 ZNF595Q8IYB9 648 aa11.23□□□□□ -0.61
LSM2-208ENST00000375661 MMP21Q8N119 569 aa11.23□□□□□ -0.61
LSM2-208ENST00000375661 PSD4Q8NDX1 1056 aa11.23□□□□□ -0.61
LSM2-208ENST00000375661 FAM76AQ8TAV0 307 aa11.23□□□□□ -0.61
LSM2-208ENST00000375661 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.23□□□□□ -0.61
LSM2-208ENST00000375661 C16orf78Q8WTQ4 265 aa11.23□□□□□ -0.61
LSM2-208ENST00000375661 VMP1Q96GC9 406 aa11.23□□□□□ -0.61
LSM2-208ENST00000375661 PPP3R2Q96LZ3 170 aa11.23□□□□□ -0.61
LSM2-208ENST00000375661 AKTIPQ9H8T0 292 aa11.23□□□□□ -0.61
LSM2-208ENST00000375661 ZDHHC11Q9H8X9 412 aa11.23□□□□□ -0.61
LSM2-208ENST00000375661 MEAF6Q9HAF1 191 aa11.23□□□□□ -0.61
LSM2-208ENST00000375661 PRTFDC1Q9NRG1 225 aa11.23□□□□□ -0.61
LSM2-208ENST00000375661 CCM2LQ9NUG4 571 aaPredicted RBP11.23□□□□□ -0.61
LSM2-208ENST00000375661 MS4A12Q9NXJ0 267 aa11.23□□□□□ -0.61
LSM2-208ENST00000375661 ST6GALNAC2Q9UJ37 374 aa11.23□□□□□ -0.61
LSM2-208ENST00000375661 DLGAP4Q9Y2H0 992 aa11.23□□□□□ -0.61
LSM2-208ENST00000375661 GNG14A0A1W2PPG7 69 aa11.22□□□□□ -0.61
LSM2-208ENST00000375661 SLCO1B7G3V0H7 640 aa11.22□□□□□ -0.61
LSM2-208ENST00000375661 SDHDO14521 159 aa11.22□□□□□ -0.61
LSM2-208ENST00000375661 PGRMC2O15173 223 aa11.22□□□□□ -0.61
LSM2-208ENST00000375661 EDF1O60869 148 aaKnown RBP11.22□□□□□ -0.61
LSM2-208ENST00000375661 PDE9AO76083 593 aa11.22□□□□□ -0.61
LSM2-208ENST00000375661 IGHG3P01860 377 aa11.22□□□□□ -0.61
LSM2-208ENST00000375661 IL3P08700 152 aa11.22□□□□□ -0.61
LSM2-208ENST00000375661 ANXA4P09525 319 aaPredicted RBP11.22□□□□□ -0.61
LSM2-208ENST00000375661 NR2F6P10588 404 aa11.22□□□□□ -0.61
LSM2-208ENST00000375661 MAOAP21397 527 aa11.22□□□□□ -0.61
LSM2-208ENST00000375661 MDH1P40925 334 aaKnown RBP11.22□□□□□ -0.61
LSM2-208ENST00000375661 BUD31P41223 144 aaPredicted RBP11.22□□□□□ -0.61
LSM2-208ENST00000375661 HSD17B7P56937 341 aa11.22□□□□□ -0.61
LSM2-208ENST00000375661 GPR85P60893 370 aa11.22□□□□□ -0.61
LSM2-208ENST00000375661 PPIAP62937 165 aaKnown RBP11.22□□□□□ -0.61
LSM2-208ENST00000375661 PLGLB1Q02325 96 aa11.22□□□□□ -0.61
LSM2-208ENST00000375661 NDUFAF5Q5TEU4 345 aa11.22□□□□□ -0.61
LSM2-208ENST00000375661 B3GNT6Q6ZMB0 384 aa11.22□□□□□ -0.61
LSM2-208ENST00000375661 CLNKQ7Z7G1 428 aa11.22□□□□□ -0.61
LSM2-208ENST00000375661 SLC22A16Q86VW1 577 aa11.22□□□□□ -0.61
LSM2-208ENST00000375661 OR4N5Q8IXE1 308 aa11.22□□□□□ -0.61
LSM2-208ENST00000375661 RPRMLQ8N4K4 120 aa11.22□□□□□ -0.61
LSM2-208ENST00000375661 NRGNQ92686 78 aa11.22□□□□□ -0.61
LSM2-208ENST00000375661 ANKRD9Q96BM1 317 aaPredicted RBP11.22□□□□□ -0.61
LSM2-208ENST00000375661 TUBGCP3Q96CW5 907 aa11.22□□□□□ -0.61
LSM2-208ENST00000375661 TTYH2Q9BSA4 534 aa11.22□□□□□ -0.61
LSM2-208ENST00000375661 POLDIP3Q9BY77 421 aaKnown RBP11.22□□□□□ -0.61
LSM2-208ENST00000375661 DEFB127Q9H1M4 99 aa11.22□□□□□ -0.61
LSM2-208ENST00000375661 CCDC134Q9H6E4 229 aa11.22□□□□□ -0.61
LSM2-208ENST00000375661 RPF2Q9H7B2 306 aaKnown RBP11.22□□□□□ -0.61
LSM2-208ENST00000375661 PFDN4Q9NQP4 134 aa11.22□□□□□ -0.61
LSM2-208ENST00000375661 PNPLA3Q9NST1 481 aa11.22□□□□□ -0.61
LSM2-208ENST00000375661 FAM53CQ9NYF3 392 aa11.22□□□□□ -0.61
LSM2-208ENST00000375661 HEY2Q9UBP5 337 aa11.22□□□□□ -0.61
LSM2-208ENST00000375661 VTI1BQ9UEU0 232 aa11.22□□□□□ -0.61
LSM2-208ENST00000375661 CES1P1Q9UKY3 287 aa11.22□□□□□ -0.61
LSM2-208ENST00000375661 ERVK-11Q9UQG0 969 aa11.22□□□□□ -0.61
LSM2-208ENST00000375661 MRPS33Q9Y291 106 aaKnown RBP11.22□□□□□ -0.61
LSM2-208ENST00000375661 TMED5Q9Y3A6 229 aa11.22□□□□□ -0.61
LSM2-208ENST00000375661 L3MBTL1Q9Y468 752 aa11.22□□□□□ -0.61
LSM2-208ENST00000375661 PCDHA9Q9Y5H5 950 aa11.22□□□□□ -0.61
LSM2-208ENST00000375661 SPACA6W5XKT8 324 aa11.22□□□□□ -0.61
LSM2-208ENST00000375661 MYOCOSA0A1B0GUC4 107 aa11.21□□□□□ -0.61
LSM2-208ENST00000375661 A0A1B0GVC2 190 aa11.21□□□□□ -0.61
LSM2-208ENST00000375661 GLOD5A6NK44 160 aa11.21□□□□□ -0.61
LSM2-208ENST00000375661 A8MUA0 341 aa11.21□□□□□ -0.61
LSM2-208ENST00000375661 A8MVJ9 347 aa11.21□□□□□ -0.61
LSM2-208ENST00000375661 FAM47E-STBD1D6RA91 191 aa11.21□□□□□ -0.61
LSM2-208ENST00000375661 NPIPA2E9PIF3 369 aa11.21□□□□□ -0.61
LSM2-208ENST00000375661 NPIPA3F8WFD2 350 aa11.21□□□□□ -0.61
LSM2-208ENST00000375661 CLDN4O14493 209 aa11.21□□□□□ -0.61
LSM2-208ENST00000375661 FGF17O60258 216 aa11.21□□□□□ -0.61
LSM2-208ENST00000375661 WDR1O75083 606 aa11.21□□□□□ -0.61
LSM2-208ENST00000375661 LDB3O75112 727 aa11.21□□□□□ -0.61
LSM2-208ENST00000375661 GUCY1B2O75343 617 aa11.21□□□□□ -0.61
LSM2-208ENST00000375661 ZFAND5O76080 213 aa11.21□□□□□ -0.61
LSM2-208ENST00000375661 MYO1DO94832 1006 aa11.21□□□□□ -0.61
LSM2-208ENST00000375661 DRD2P14416 443 aa11.21□□□□□ -0.61
LSM2-208ENST00000375661 SDC1P18827 310 aa11.21□□□□□ -0.61
LSM2-208ENST00000375661 DNASE1P24855 282 aa11.21□□□□□ -0.61
LSM2-208ENST00000375661 TLX1P31314 330 aaPredicted RBP11.21□□□□□ -0.61
LSM2-208ENST00000375661 GPR143P51810 404 aa11.21□□□□□ -0.61
LSM2-208ENST00000375661 IGLV3-21P80748 117 aaPredicted RBP11.21□□□□□ -0.61
LSM2-208ENST00000375661 ID2Q02363 134 aa11.21□□□□□ -0.61
LSM2-208ENST00000375661 EMX2Q04743 252 aa11.21□□□□□ -0.61
LSM2-208ENST00000375661 ZNF763Q0D2J5 394 aa11.21□□□□□ -0.61
LSM2-208ENST00000375661 SLC13A2Q13183 592 aa11.21□□□□□ -0.61
LSM2-208ENST00000375661 SLC9B1Q4ZJI4 515 aa11.21□□□□□ -0.61
LSM2-208ENST00000375661 ATP6AP1LQ52LC2 224 aa11.21□□□□□ -0.61
LSM2-208ENST00000375661 IL23RQ5VWK5 629 aa11.21□□□□□ -0.61
LSM2-208ENST00000375661 FAM71E1Q6IPT2 247 aa11.21□□□□□ -0.61
LSM2-208ENST00000375661 ARSKQ6UWY0 536 aa11.21□□□□□ -0.61
LSM2-208ENST00000375661 GK5Q6ZS86 529 aa11.21□□□□□ -0.61
LSM2-208ENST00000375661 LARP4Q71RC2 724 aaKnown RBP eCLIP11.21□□□□□ -0.612e-9■■■■■ 29.4
LSM2-208ENST00000375661 CAMKMTQ7Z624 323 aa11.21□□□□□ -0.61
LSM2-208ENST00000375661 OR2M7Q8NG81 312 aa11.21□□□□□ -0.61
LSM2-208ENST00000375661 OR10Q1Q8NGQ4 319 aa11.21□□□□□ -0.61
LSM2-208ENST00000375661 TANKQ92844 425 aa11.21□□□□□ -0.61
LSM2-208ENST00000375661 MAELQ96JY0 434 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms