RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 LCE1FQ5T754 118 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 N4BP2L1Q5TBK1 243 aaPredicted RBP4.17□□□□□ -1.74
PMS1-202ENST00000374826 LRRC8EQ6NSJ5 796 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 TMEM220Q6QAJ8 160 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 TUBA1AQ71U36 451 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 ZNF771Q7L3S4 317 aaPredicted RBP4.17□□□□□ -1.74
PMS1-202ENST00000374826 EFL1Q7Z2Z2 1120 aaKnown RBP4.17□□□□□ -1.74
PMS1-202ENST00000374826 GPAT4Q86UL3 456 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 HOOK3Q86VS8 718 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 SERPINA9Q86WD7 417 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 MARCH9Q86YJ5 346 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 ZNF547Q8IVP9 402 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 CLDN19Q8N6F1 224 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 ARL10Q8N8L6 244 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 NOA1Q8NC60 698 aaKnown RBP4.17□□□□□ -1.74
PMS1-202ENST00000374826 SLC37A2Q8TED4 501 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.17□□□□□ -1.74
PMS1-202ENST00000374826 ULK4Q96C45 1275 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 SGF29Q96ES7 293 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 STAMBPL1Q96FJ0 436 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 CFAP36Q96G28 342 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 DCUN1D1Q96GG9 259 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 C3orf30Q96M34 536 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 TTC25Q96NG3 672 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 COPS8Q99627 209 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 TUBA1CQ9BQE3 449 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 LRRC1Q9BTT6 524 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 KIFC1Q9BW19 673 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 CARD6Q9BX69 1037 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 EVA1AQ9H8M9 152 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 UBTD1Q9HAC8 227 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 MRM3Q9HC36 420 aaKnown RBP4.17□□□□□ -1.74
PMS1-202ENST00000374826 TREX1Q9NSU2 369 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 ZNF224Q9NZL3 707 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 KIAA1456Q9P272 454 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 SLC23A2Q9UGH3 650 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 ANAPC5Q9UJX4 755 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 PSMD13Q9UNM6 376 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 PRSS21Q9Y6M0 314 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 CSNK1G3Q9Y6M4 447 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 RPS6KL1Q9Y6S9 549 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 USP24Q9UPU5 2620 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 CACNA1GO43497 2377 aa4.17□□□□□ -1.74
PMS1-202ENST00000374826 IGLV3-16A0A075B6K0 115 aa4.16□□□□□ -1.74
PMS1-202ENST00000374826 IGHV4OR15-8A0A075B7B6 117 aa4.16□□□□□ -1.74
PMS1-202ENST00000374826 FAM237BA0A1B0GVD1 139 aa4.16□□□□□ -1.74
PMS1-202ENST00000374826 CTAGE15A4D2H0 777 aa4.16□□□□□ -1.74
PMS1-202ENST00000374826 FAM149AA5PLN7 773 aa4.16□□□□□ -1.74
PMS1-202ENST00000374826 A6NCN8 305 aa4.16□□□□□ -1.74
PMS1-202ENST00000374826 SDR42E2A6NKP2 422 aa4.16□□□□□ -1.74
PMS1-202ENST00000374826 OR52A4PA6NMU1 304 aa4.16□□□□□ -1.74
PMS1-202ENST00000374826 GPR89AB7ZAQ6 455 aa4.16□□□□□ -1.74
PMS1-202ENST00000374826 AP3B1O00203 1094 aa4.16□□□□□ -1.74
PMS1-202ENST00000374826 KMOO15229 486 aa4.16□□□□□ -1.74
PMS1-202ENST00000374826 PIP5K1CO60331 668 aa4.16□□□□□ -1.74
PMS1-202ENST00000374826 NDUFS7O75251 213 aa4.16□□□□□ -1.74
PMS1-202ENST00000374826 POP7O75817 140 aaKnown RBP4.16□□□□□ -1.74
PMS1-202ENST00000374826 SP1P08047 785 aa4.16□□□□□ -1.74
PMS1-202ENST00000374826 GPR89BP0CG08 455 aa4.16□□□□□ -1.74
PMS1-202ENST00000374826 CTAGE8P0CG41 777 aa4.16□□□□□ -1.74
PMS1-202ENST00000374826 RALBP11234 206 aa4.16□□□□□ -1.74
PMS1-202ENST00000374826 MLNP12872 115 aa4.16□□□□□ -1.74
PMS1-202ENST00000374826 F3P13726 295 aa4.16□□□□□ -1.74
PMS1-202ENST00000374826 ATP1B2P14415 290 aaPredicted RBP4.16□□□□□ -1.74
PMS1-202ENST00000374826 ZNF7P17097 686 aaPredicted RBP4.16□□□□□ -1.74
PMS1-202ENST00000374826 PGAM1P18669 254 aa4.16□□□□□ -1.74
PMS1-202ENST00000374826 ACP1P24666 158 aa4.16□□□□□ -1.74
PMS1-202ENST00000374826 PSMA3P25788 255 aa4.16□□□□□ -1.74
PMS1-202ENST00000374826 POU1F1P28069 291 aa4.16□□□□□ -1.74
PMS1-202ENST00000374826 HNRNPH1P31943 449 aaKnown RBP4.16□□□□□ -1.74
PMS1-202ENST00000374826 STX2P32856 288 aa4.16□□□□□ -1.74
PMS1-202ENST00000374826 DEKP35659 375 aaKnown RBP4.16□□□□□ -1.74
PMS1-202ENST00000374826 ELK3P41970 407 aa4.16□□□□□ -1.74
PMS1-202ENST00000374826 SLC1A2P43004 574 aa4.16□□□□□ -1.74
PMS1-202ENST00000374826 MAPK9P45984 424 aa4.16□□□□□ -1.74
PMS1-202ENST00000374826 PPM1FP49593 454 aaPredicted RBP4.16□□□□□ -1.74
PMS1-202ENST00000374826 PRLHRP49683 370 aa4.16□□□□□ -1.74
PMS1-202ENST00000374826 CSE1LP55060 971 aaKnown RBP4.16□□□□□ -1.74
PMS1-202ENST00000374826 EIF3BP55884 814 aaKnown RBP4.16□□□□□ -1.74
PMS1-202ENST00000374826 EFNB1P98172 346 aa4.16□□□□□ -1.74
PMS1-202ENST00000374826 MPP1Q00013 466 aa4.16□□□□□ -1.74
PMS1-202ENST00000374826 ACVR1Q04771 509 aa4.16□□□□□ -1.74
PMS1-202ENST00000374826 ZNF155Q12901 538 aaPredicted RBP4.16□□□□□ -1.74
PMS1-202ENST00000374826 PDIA2Q13087 525 aaKnown RBP4.16□□□□□ -1.74
PMS1-202ENST00000374826 CALCOCO2Q13137 446 aa4.16□□□□□ -1.74
PMS1-202ENST00000374826 ITIH4Q14624 930 aa4.16□□□□□ -1.74
PMS1-202ENST00000374826 CRYMQ14894 314 aa4.16□□□□□ -1.74
PMS1-202ENST00000374826 EFNB3Q15768 340 aa4.16□□□□□ -1.74
PMS1-202ENST00000374826 GPR33Q49SQ1 333 aa4.16□□□□□ -1.74
PMS1-202ENST00000374826 ANKRD20A4Q4UJ75 823 aa4.16□□□□□ -1.74
PMS1-202ENST00000374826 BCL7AQ4VC05 210 aa4.16□□□□□ -1.74
PMS1-202ENST00000374826 FASTKD1Q53R41 847 aaKnown RBP4.16□□□□□ -1.74
PMS1-202ENST00000374826 DNAJC21Q5F1R6 531 aaKnown RBP4.16□□□□□ -1.74
PMS1-202ENST00000374826 HES3Q5TGS1 186 aa4.16□□□□□ -1.74
PMS1-202ENST00000374826 DUPD1Q68J44 220 aa4.16□□□□□ -1.74
PMS1-202ENST00000374826 HIST2H2BCQ6DN03 193 aa4.16□□□□□ -1.74
PMS1-202ENST00000374826 ZNF470Q6ECI4 717 aa4.16□□□□□ -1.74
PMS1-202ENST00000374826 KIAA0930Q6ICG6 404 aaPredicted RBP4.16□□□□□ -1.74
PMS1-202ENST00000374826 DUS1LQ6P1R4 473 aaKnown RBP4.16□□□□□ -1.74
PMS1-202ENST00000374826 C9orf139Q6ZV77 190 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms