RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 PPP4R4Q6NUP7 873 aa14.65□□□□□ -0.06
NIPAL3-204ENST00000374399 TBPL2Q6SJ96 375 aa14.65□□□□□ -0.06
NIPAL3-204ENST00000374399 PIWIL3Q7Z3Z3 882 aaKnown RBP14.65□□□□□ -0.06
NIPAL3-204ENST00000374399 TMEM179BQ7Z7N9 219 aa14.65□□□□□ -0.06
NIPAL3-204ENST00000374399 COMTD1Q86VU5 262 aa14.65□□□□□ -0.06
NIPAL3-204ENST00000374399 ZDHHC21Q8IVQ6 265 aa14.65□□□□□ -0.06
NIPAL3-204ENST00000374399 METTL25Q8N6Q8 603 aa14.65□□□□□ -0.06
NIPAL3-204ENST00000374399 SMYD1Q8NB12 490 aa14.65□□□□□ -0.06
NIPAL3-204ENST00000374399 PRSS33Q8NF86 280 aa14.65□□□□□ -0.06
NIPAL3-204ENST00000374399 GPR32P1Q8NGA4 272 aa14.65□□□□□ -0.06
NIPAL3-204ENST00000374399 ZNF570Q96NI8 536 aa14.65□□□□□ -0.06
NIPAL3-204ENST00000374399 ADPRHL2Q9NX46 363 aa14.65□□□□□ -0.06
NIPAL3-204ENST00000374399 DNAJB9Q9UBS3 223 aa14.65□□□□□ -0.06
NIPAL3-204ENST00000374399 FTSJ1Q9UET6 329 aa14.65□□□□□ -0.06
NIPAL3-204ENST00000374399 GPC6Q9Y625 555 aaPredicted RBP14.65□□□□□ -0.06
NIPAL3-204ENST00000374399 hCG_2039718K7EN88 272 aa14.64□□□□□ -0.07
NIPAL3-204ENST00000374399 DLGAP1O14490 977 aa14.64□□□□□ -0.07
NIPAL3-204ENST00000374399 DEAF1O75398 565 aaPredicted RBP14.64□□□□□ -0.07
NIPAL3-204ENST00000374399 CST1P01037 141 aa14.64□□□□□ -0.07
NIPAL3-204ENST00000374399 CLPSP04118 112 aa14.64□□□□□ -0.07
NIPAL3-204ENST00000374399 FBLP22087 321 aaKnown RBP14.64□□□□□ -0.07
NIPAL3-204ENST00000374399 TXNL4AP83876 142 aaKnown RBP14.64□□□□□ -0.07
NIPAL3-204ENST00000374399 SPEM2Q0P670 501 aa14.64□□□□□ -0.07
NIPAL3-204ENST00000374399 STX4Q12846 297 aa14.64□□□□□ -0.07
NIPAL3-204ENST00000374399 PUM1Q14671 1186 aaKnown RBP eCLIP14.64□□□□□ -0.07
NIPAL3-204ENST00000374399 VWA5B2Q8N398 1253 aa14.64□□□□□ -0.07
NIPAL3-204ENST00000374399 GALNT4Q8N4A0 578 aa14.64□□□□□ -0.07
NIPAL3-204ENST00000374399 CATSPER1Q8NEC5 780 aa14.64□□□□□ -0.07
NIPAL3-204ENST00000374399 TSLPQ969D9 159 aa14.64□□□□□ -0.07
NIPAL3-204ENST00000374399 TMBIM1Q969X1 311 aa14.64□□□□□ -0.07
NIPAL3-204ENST00000374399 SLC38A1Q9H2H9 487 aa14.64□□□□□ -0.07
NIPAL3-204ENST00000374399 VCX3BQ9H321 246 aa14.64□□□□□ -0.07
NIPAL3-204ENST00000374399 ADAP2Q9NPF8 381 aa14.64□□□□□ -0.07
NIPAL3-204ENST00000374399 GIN1Q9NXP7 522 aa14.64□□□□□ -0.07
NIPAL3-204ENST00000374399 RARRES3Q9UL19 164 aa14.64□□□□□ -0.07
NIPAL3-204ENST00000374399 SRPK3Q9UPE1 567 aa14.64□□□□□ -0.07
NIPAL3-204ENST00000374399 ZNF451Q9Y4E5 1061 aa14.64□□□□□ -0.07
NIPAL3-204ENST00000374399 MMACHCQ9Y4U1 282 aa14.64□□□□□ -0.07
NIPAL3-204ENST00000374399 MAGED1Q9Y5V3 778 aaPredicted RBP14.64□□□□□ -0.07
NIPAL3-204ENST00000374399 DSPPQ9NZW4 1301 aa14.64□□□□□ -0.07
NIPAL3-204ENST00000374399 C5orf58C9J3I9 102 aa14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 OR10H2O60403 315 aa14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 DIRAS1O95057 198 aa14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 EPPINO95925 133 aa14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 NR2F1P10589 423 aa14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 HOXB6P17509 224 aaKnown RBP14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 RORAP35398 523 aa14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 FOXL2P58012 376 aa14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 TRA2AQ13595 282 aaKnown RBP eCLIP14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 TAF11Q15544 211 aa14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 NRF1Q16656 503 aa14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 CMPK2Q5EBM0 449 aa14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 FKBP9P1Q75LS8 142 aa14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 LAPTM4BQ86VI4 370 aa14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 NAXDQ8IW45 347 aa14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 GALNT12Q8IXK2 581 aa14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 CBR4Q8N4T8 237 aa14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 OR52R1Q8NGF1 315 aa14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 CDS1Q92903 461 aa14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 RIT1Q92963 219 aa14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 ZG16BQ96DA0 208 aa14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 WFDC6Q9BQY6 131 aa14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 EDEM2Q9BV94 578 aa14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 YY1AP1Q9H869 796 aa14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 PARD6AQ9NPB6 346 aa14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 CTSFQ9UBX1 484 aa14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 PADI2Q9Y2J8 665 aa14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 IGLV3-12A0A075B6K2 115 aa14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 EFCAB7A8K855 629 aa14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 SCRG1O75711 98 aa14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 H6PDO95479 791 aa14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 ONECUT2O95948 504 aa14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 FABP3P05413 133 aa14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 FGF5P12034 268 aa14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 ACADSP16219 412 aa14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 ATP6V1C1P21283 382 aa14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 TGM1P22735 817 aa14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 SSTR4P31391 388 aa14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 OR1E2P47887 323 aa14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 EMDP50402 254 aa14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 ANXA11P50995 505 aaKnown RBP14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 FUT7Q11130 342 aa14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 PPP1R8Q12972 351 aaKnown RBP14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 ARHGAP40Q5TG30 622 aa14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 QSOX2Q6ZRP7 698 aa14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 ZBTB49Q6ZSB9 765 aa14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 HMGN2P46Q86SG4 172 aa14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 ADAMTS15Q8TE58 950 aa14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 PTPMT1Q8WUK0 201 aaPredicted RBP14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 RBM18Q96H35 190 aaKnown RBP14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 VPS50Q96JG6 964 aa14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 ZNF597Q96LX8 424 aa14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 PTCHD1Q96NR3 888 aa14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 TRNT1Q96Q11 434 aaKnown RBP14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 BDH2Q9BUT1 245 aa14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 YIPF2Q9BWQ6 316 aa14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 COL25A1Q9BXS0 654 aaPredicted RBP14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 SEMA4GQ9NTN9 838 aa14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 NDUFAF4Q9P032 175 aa14.63□□□□□ -0.07
NIPAL3-204ENST00000374399 DTX4Q9Y2E6 619 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms