RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 ZXDCQ2QGD7 858 aaPredicted RBP16.71■□□□□ 0.27
TRAF3IP1-201ENST00000373327 SYNPOQ8N3V7 929 aa16.71■□□□□ 0.27
TRAF3IP1-201ENST00000373327 TTLQ8NG68 377 aa16.71■□□□□ 0.27
TRAF3IP1-201ENST00000373327 SNX33Q8WV41 574 aa16.71■□□□□ 0.27
TRAF3IP1-201ENST00000373327 NTNG1Q9Y2I2 539 aa16.71■□□□□ 0.27
TRAF3IP1-201ENST00000373327 LINC01553A4QN01 128 aa16.71■□□□□ 0.27
TRAF3IP1-201ENST00000373327 RIIAD1A6NNX1 92 aa16.71■□□□□ 0.27
TRAF3IP1-201ENST00000373327 ZNF888P0CJ79 500 aaPredicted RBP16.71■□□□□ 0.27
TRAF3IP1-201ENST00000373327 MYL9P24844 172 aa16.71■□□□□ 0.27
TRAF3IP1-201ENST00000373327 SHC2P98077 582 aa16.71■□□□□ 0.27
TRAF3IP1-201ENST00000373327 CITED4Q96RK1 184 aa16.71■□□□□ 0.27
TRAF3IP1-201ENST00000373327 ATG4BQ9Y4P1 393 aa16.71■□□□□ 0.27
TRAF3IP1-201ENST00000373327 A0A1B0GVT2 93 aa16.71■□□□□ 0.27
TRAF3IP1-201ENST00000373327 GYPBP06028 91 aa16.71■□□□□ 0.27
TRAF3IP1-201ENST00000373327 PCSK2P16519 638 aa16.71■□□□□ 0.27
TRAF3IP1-201ENST00000373327 ACADLP28330 430 aa16.71■□□□□ 0.27
TRAF3IP1-201ENST00000373327 DESI1Q6ICB0 168 aa16.71■□□□□ 0.27
TRAF3IP1-201ENST00000373327 UNC5DQ6UXZ4 953 aa16.71■□□□□ 0.27
TRAF3IP1-201ENST00000373327 AMER3Q8N944 861 aa16.71■□□□□ 0.27
TRAF3IP1-201ENST00000373327 OR4K14Q8NGD5 310 aa16.71■□□□□ 0.27
TRAF3IP1-201ENST00000373327 OR6Q1Q8NGQ2 317 aa16.71■□□□□ 0.27
TRAF3IP1-201ENST00000373327 AP3S1Q92572 193 aa16.71■□□□□ 0.27
TRAF3IP1-201ENST00000373327 SUZ12Q15022 739 aaKnown RBP16.7■□□□□ 0.26
TRAF3IP1-201ENST00000373327 PRPF38BQ5VTL8 546 aaKnown RBP16.7■□□□□ 0.26
TRAF3IP1-201ENST00000373327 FAAH2Q6GMR7 532 aa16.7■□□□□ 0.26
TRAF3IP1-201ENST00000373327 DENND6BQ8NEG7 585 aa16.7■□□□□ 0.26
TRAF3IP1-201ENST00000373327 ZNF563Q8TA94 476 aa16.7■□□□□ 0.26
TRAF3IP1-201ENST00000373327 RFKQ969G6 155 aa16.7■□□□□ 0.26
TRAF3IP1-201ENST00000373327 TM4SF18Q96CE8 201 aa16.7■□□□□ 0.26
TRAF3IP1-201ENST00000373327 HRASLS5Q96KN8 279 aa16.7■□□□□ 0.26
TRAF3IP1-201ENST00000373327 TMEM184CQ9NVA4 438 aa16.7■□□□□ 0.26
TRAF3IP1-201ENST00000373327 USP36Q9P275 1121 aaKnown RBP16.7■□□□□ 0.26
TRAF3IP1-201ENST00000373327 CASP8AP2Q9UKL3 1982 aa16.7■□□□□ 0.26
TRAF3IP1-201ENST00000373327 NAA10P41227 235 aaPredicted RBP16.7■□□□□ 0.26
TRAF3IP1-201ENST00000373327 TRAM2Q15035 370 aa16.7■□□□□ 0.26
TRAF3IP1-201ENST00000373327 PLAG1Q6DJT9 500 aa16.7■□□□□ 0.26
TRAF3IP1-201ENST00000373327 PLBD1Q6P4A8 553 aa16.7■□□□□ 0.26
TRAF3IP1-201ENST00000373327 USP51Q70EK9 711 aa16.7■□□□□ 0.26
TRAF3IP1-201ENST00000373327 OR6T1Q8NGN1 323 aa16.7■□□□□ 0.26
TRAF3IP1-201ENST00000373327 BBS10Q8TAM1 723 aa16.7■□□□□ 0.26
TRAF3IP1-201ENST00000373327 SMURF1Q9HCE7 757 aa16.7■□□□□ 0.26
TRAF3IP1-201ENST00000373327 ANKMY1Q9P2S6 941 aa16.7■□□□□ 0.26
TRAF3IP1-201ENST00000373327 BRCA2P51587 3418 aa16.7■□□□□ 0.26
TRAF3IP1-201ENST00000373327 FAM214AQ32MH5 1076 aa16.7■□□□□ 0.26
TRAF3IP1-201ENST00000373327 TECPR1Q7Z6L1 1165 aa16.7■□□□□ 0.26
TRAF3IP1-201ENST00000373327 OR4F15Q8NGB8 312 aa16.7■□□□□ 0.26
TRAF3IP1-201ENST00000373327 OR56A1Q8NGH5 318 aa16.7■□□□□ 0.26
TRAF3IP1-201ENST00000373327 DPH1Q9BZG8 443 aa16.7■□□□□ 0.26
TRAF3IP1-201ENST00000373327 ZFR2Q9UPR6 939 aaKnown RBP16.7■□□□□ 0.26
TRAF3IP1-201ENST00000373327 HSPE1-MOB4S4R3N1 261 aa16.7■□□□□ 0.26
TRAF3IP1-201ENST00000373327 PSMD9O00233 223 aa16.7■□□□□ 0.26
TRAF3IP1-201ENST00000373327 PLD2O14939 933 aa16.7■□□□□ 0.26
TRAF3IP1-201ENST00000373327 FAM71E1Q6IPT2 247 aa16.7■□□□□ 0.26
TRAF3IP1-201ENST00000373327 MZT2BQ6NZ67 158 aa16.7■□□□□ 0.26
TRAF3IP1-201ENST00000373327 MZT2AQ6P582 158 aa16.7■□□□□ 0.26
TRAF3IP1-201ENST00000373327 Q8N9G6 341 aaPredicted RBP16.7■□□□□ 0.26
TRAF3IP1-201ENST00000373327 SAMD8Q96LT4 415 aa16.7■□□□□ 0.26
TRAF3IP1-201ENST00000373327 BTBD1Q9H0C5 482 aa16.7■□□□□ 0.26
TRAF3IP1-201ENST00000373327 GLIPR2Q9H4G4 154 aa16.7■□□□□ 0.26
TRAF3IP1-201ENST00000373327 RWDD3Q9Y3V2 267 aa16.7■□□□□ 0.26
TRAF3IP1-201ENST00000373327 ARHGAP33O14559 1287 aa16.69■□□□□ 0.26
TRAF3IP1-201ENST00000373327 SLC2A2P11168 524 aaPredicted RBP16.69■□□□□ 0.26
TRAF3IP1-201ENST00000373327 HOXB3P14651 431 aaPredicted RBP16.69■□□□□ 0.26
TRAF3IP1-201ENST00000373327 ZNF91Q05481 1191 aa16.69■□□□□ 0.26
TRAF3IP1-201ENST00000373327 ZNF267Q14586 743 aaPredicted RBP16.69■□□□□ 0.26
TRAF3IP1-201ENST00000373327 EXOSC7Q15024 291 aaKnown RBP16.69■□□□□ 0.26
TRAF3IP1-201ENST00000373327 LCTLQ6UWM7 567 aa16.69■□□□□ 0.26
TRAF3IP1-201ENST00000373327 OR52E4Q8NGH9 312 aa16.69■□□□□ 0.26
TRAF3IP1-201ENST00000373327 MMP28Q9H239 520 aa16.69■□□□□ 0.26
TRAF3IP1-201ENST00000373327 HCN3Q9P1Z3 774 aa16.69■□□□□ 0.26
TRAF3IP1-201ENST00000373327 PSORS1C1Q9UIG5 152 aa16.69■□□□□ 0.26
TRAF3IP1-201ENST00000373327 STOML2Q9UJZ1 356 aa16.69■□□□□ 0.26
TRAF3IP1-201ENST00000373327 WDR37Q9Y2I8 494 aa16.69■□□□□ 0.26
TRAF3IP1-201ENST00000373327 CLDN24A6NM45 220 aa16.69■□□□□ 0.26
TRAF3IP1-201ENST00000373327 ADAP00813 363 aa16.69■□□□□ 0.26
TRAF3IP1-201ENST00000373327 SDC2P34741 201 aa16.69■□□□□ 0.26
TRAF3IP1-201ENST00000373327 ZNF517Q6ZMY9 492 aaPredicted RBP16.69■□□□□ 0.26
TRAF3IP1-201ENST00000373327 ASPGQ86U10 573 aa16.69■□□□□ 0.26
TRAF3IP1-201ENST00000373327 SPHK1Q9NYA1 384 aa16.69■□□□□ 0.26
TRAF3IP1-201ENST00000373327 CALML5Q9NZT1 146 aa16.69■□□□□ 0.26
TRAF3IP1-201ENST00000373327 PCDHGB6Q9Y5F9 930 aa16.69■□□□□ 0.26
TRAF3IP1-201ENST00000373327 FAM171A2A8MVW0 826 aa16.69■□□□□ 0.26
TRAF3IP1-201ENST00000373327 CHURC1-FNTBB4DL54 471 aa16.69■□□□□ 0.26
TRAF3IP1-201ENST00000373327 KHNYNO15037 678 aaKnown RBP16.69■□□□□ 0.26
TRAF3IP1-201ENST00000373327 HYAL3O43820 417 aaPredicted RBP16.69■□□□□ 0.26
TRAF3IP1-201ENST00000373327 CPNE6O95741 557 aa16.69■□□□□ 0.26
TRAF3IP1-201ENST00000373327 RAB36O95755 333 aa16.69■□□□□ 0.26
TRAF3IP1-201ENST00000373327 RAE1P78406 368 aaKnown RBP16.69■□□□□ 0.26
TRAF3IP1-201ENST00000373327 PRDX1Q06830 199 aaKnown RBP16.69■□□□□ 0.26
TRAF3IP1-201ENST00000373327 RTL4Q6ZR62 310 aa16.69■□□□□ 0.26
TRAF3IP1-201ENST00000373327 ZNF367Q7RTV3 350 aa16.69■□□□□ 0.26
TRAF3IP1-201ENST00000373327 SLC7A13Q8TCU3 470 aa16.69■□□□□ 0.26
TRAF3IP1-201ENST00000373327 ADAMTS16Q8TE57 1224 aa16.69■□□□□ 0.26
TRAF3IP1-201ENST00000373327 RLN3Q8WXF3 142 aa16.69■□□□□ 0.26
TRAF3IP1-201ENST00000373327 CDS1Q92903 461 aa16.69■□□□□ 0.26
TRAF3IP1-201ENST00000373327 NELL2Q99435 816 aa16.69■□□□□ 0.26
TRAF3IP1-201ENST00000373327 MED20Q9H944 212 aa16.69■□□□□ 0.26
TRAF3IP1-201ENST00000373327 SLC6A14Q9UN76 642 aa16.69■□□□□ 0.26
TRAF3IP1-201ENST00000373327 DUXAA6NLW8 204 aa16.68■□□□□ 0.26
TRAF3IP1-201ENST00000373327 OLFM2O95897 454 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms