RNA–Protein interactions for RNA: ENST00000372407.4

PTPRF-203, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,600 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-203ENST00000372407 VAPAQ9P0L0 249 aa10.88□□□□□ -0.67
PTPRF-203ENST00000372407 M0QZQ0 153 aa10.88□□□□□ -0.67
PTPRF-203ENST00000372407 CREBL2O60519 120 aaPredicted RBP10.88□□□□□ -0.67
PTPRF-203ENST00000372407 GPR37L1O60883 481 aa10.88□□□□□ -0.67
PTPRF-203ENST00000372407 LCKP06239 509 aa10.88□□□□□ -0.67
PTPRF-203ENST00000372407 H2BFMP0C1H6 154 aa10.88□□□□□ -0.67
PTPRF-203ENST00000372407 PET100P0DJ07 73 aa10.88□□□□□ -0.67
PTPRF-203ENST00000372407 C6P13671 934 aa10.88□□□□□ -0.67
PTPRF-203ENST00000372407 GPX3P22352 226 aa10.88□□□□□ -0.67
PTPRF-203ENST00000372407 DPP6P42658 865 aa10.88□□□□□ -0.67
PTPRF-203ENST00000372407 AFF1P51825 1210 aaKnown RBP10.88□□□□□ -0.67
PTPRF-203ENST00000372407 RPS15AP62244 130 aaKnown RBP10.88□□□□□ -0.67
PTPRF-203ENST00000372407 AAK1Q2M2I8 961 aa10.88□□□□□ -0.67
PTPRF-203ENST00000372407 GRHL2Q6ISB3 625 aa10.88□□□□□ -0.67
PTPRF-203ENST00000372407 SCD5Q86SK9 330 aa10.88□□□□□ -0.67
PTPRF-203ENST00000372407 GDPD1Q8N9F7 314 aa10.88□□□□□ -0.67
PTPRF-203ENST00000372407 ZNF597Q96LX8 424 aa10.88□□□□□ -0.67
PTPRF-203ENST00000372407 URM1Q9BTM9 101 aaKnown RBP10.88□□□□□ -0.67
PTPRF-203ENST00000372407 ZNF350Q9GZX5 532 aa10.88□□□□□ -0.67
PTPRF-203ENST00000372407 KATNBL1Q9H079 304 aa10.88□□□□□ -0.67
PTPRF-203ENST00000372407 COPZ2Q9P299 210 aa10.88□□□□□ -0.67
PTPRF-203ENST00000372407 NLKQ9UBE8 527 aa10.88□□□□□ -0.67
PTPRF-203ENST00000372407 UBQLN2Q9UHD9 624 aa10.88□□□□□ -0.67
PTPRF-203ENST00000372407 DDX60Q8IY21 1712 aaKnown RBP10.88□□□□□ -0.67
PTPRF-203ENST00000372407 MYH7BA7E2Y1 1941 aa10.88□□□□□ -0.67
PTPRF-203ENST00000372407 PEX12O00623 359 aa10.88□□□□□ -0.67
PTPRF-203ENST00000372407 UGDHO60701 494 aa10.88□□□□□ -0.67
PTPRF-203ENST00000372407 FARS2O95363 451 aaKnown RBP10.88□□□□□ -0.67
PTPRF-203ENST00000372407 PRKCAP17252 672 aa10.88□□□□□ -0.67
PTPRF-203ENST00000372407 RGNQ15493 299 aa10.88□□□□□ -0.67
PTPRF-203ENST00000372407 C18orf21Q32NC0 220 aaPredicted RBP10.88□□□□□ -0.67
PTPRF-203ENST00000372407 LRRC37A5PQ49AS3 106 aa10.88□□□□□ -0.67
PTPRF-203ENST00000372407 LRFN4Q6PJG9 635 aa10.88□□□□□ -0.67
PTPRF-203ENST00000372407 LARP4Q71RC2 724 aaKnown RBP eCLIP10.88□□□□□ -0.679e-10■□□□□ 10.6
PTPRF-203ENST00000372407 DCP2Q8IU60 420 aaKnown RBP10.88□□□□□ -0.67
PTPRF-203ENST00000372407 NAGSQ8N159 534 aa10.88□□□□□ -0.67
PTPRF-203ENST00000372407 SORCS1Q8WY21 1168 aa10.88□□□□□ -0.67
PTPRF-203ENST00000372407 TFAP2CQ92754 450 aa10.88□□□□□ -0.67
PTPRF-203ENST00000372407 DAZLQ92904 295 aaKnown RBP10.88□□□□□ -0.67
PTPRF-203ENST00000372407 ARL6Q9H0F7 186 aa10.88□□□□□ -0.67
PTPRF-203ENST00000372407 SYT4Q9H2B2 425 aa10.88□□□□□ -0.67
PTPRF-203ENST00000372407 TAS2R3Q9NYW6 316 aa10.88□□□□□ -0.67
PTPRF-203ENST00000372407 TTC34A8MYJ7 566 aa10.88□□□□□ -0.67
PTPRF-203ENST00000372407 ARNTLO00327 626 aa10.88□□□□□ -0.67
PTPRF-203ENST00000372407 NARSO43776 548 aaKnown RBP10.88□□□□□ -0.67
PTPRF-203ENST00000372407 CDC40O60508 579 aaKnown RBP eCLIP10.88□□□□□ -0.67
PTPRF-203ENST00000372407 CDC123O75794 336 aaPredicted RBP10.88□□□□□ -0.67
PTPRF-203ENST00000372407 GPR4P46093 362 aa10.88□□□□□ -0.67
PTPRF-203ENST00000372407 SELENOWP63302 87 aa10.88□□□□□ -0.67
PTPRF-203ENST00000372407 NNATQ16517 81 aa10.88□□□□□ -0.67
PTPRF-203ENST00000372407 LRIT3Q3SXY7 679 aa10.88□□□□□ -0.67
PTPRF-203ENST00000372407 OR4C11Q6IEV9 310 aa10.88□□□□□ -0.67
PTPRF-203ENST00000372407 CGB2Q6NT52 195 aa10.88□□□□□ -0.67
PTPRF-203ENST00000372407 TMPRSS9Q7Z410 1059 aa10.88□□□□□ -0.67
PTPRF-203ENST00000372407 KLHDC8AQ8IYD2 350 aa10.88□□□□□ -0.67
PTPRF-203ENST00000372407 OR5T2Q8NGG2 359 aa10.88□□□□□ -0.67
PTPRF-203ENST00000372407 UTP4Q969X6 686 aaKnown RBP10.88□□□□□ -0.67
PTPRF-203ENST00000372407 CHFRQ96EP1 664 aa10.88□□□□□ -0.67
PTPRF-203ENST00000372407 RAD9AQ99638 391 aa10.88□□□□□ -0.67
PTPRF-203ENST00000372407 SLC30A3Q99726 388 aa10.88□□□□□ -0.67
PTPRF-203ENST00000372407 ATG5Q9H1Y0 275 aa10.88□□□□□ -0.67
PTPRF-203ENST00000372407 ARNT2Q9HBZ2 717 aa10.88□□□□□ -0.67
PTPRF-203ENST00000372407 VNN3Q9NY84 501 aa10.88□□□□□ -0.67
PTPRF-203ENST00000372407 MYH15Q9Y2K3 1946 aa10.87□□□□□ -0.67
PTPRF-203ENST00000372407 OR7A10O76100 309 aa10.87□□□□□ -0.67
PTPRF-203ENST00000372407 SORBS2O94875 1100 aaKnown RBP10.87□□□□□ -0.67
PTPRF-203ENST00000372407 UCHL1P09936 223 aa10.87□□□□□ -0.67
PTPRF-203ENST00000372407 IQCF3P0C7M6 154 aa10.87□□□□□ -0.67
PTPRF-203ENST00000372407 CFL1P23528 166 aaKnown RBP10.87□□□□□ -0.67
PTPRF-203ENST00000372407 PNCKQ6P2M8 343 aa10.87□□□□□ -0.67
PTPRF-203ENST00000372407 GPAT4Q86UL3 456 aa10.87□□□□□ -0.67
PTPRF-203ENST00000372407 PIANPQ8IYJ0 282 aa10.87□□□□□ -0.67
PTPRF-203ENST00000372407 SYNPOQ8N3V7 929 aa10.87□□□□□ -0.67
PTPRF-203ENST00000372407 MTG2Q9H4K7 406 aa10.87□□□□□ -0.67
PTPRF-203ENST00000372407 MTHFD2LQ9H903 347 aaPredicted RBP10.87□□□□□ -0.67
PTPRF-203ENST00000372407 MGAT4CQ9UBM8 478 aa10.87□□□□□ -0.67
PTPRF-203ENST00000372407 DHDHQ9UQ10 334 aa10.87□□□□□ -0.67
PTPRF-203ENST00000372407 ARID1BQ8NFD5 2236 aaPredicted RBP10.87□□□□□ -0.67
PTPRF-203ENST00000372407 OR6C74A6NCV1 312 aa10.87□□□□□ -0.67
PTPRF-203ENST00000372407 IGLON5A6NGN9 336 aa10.87□□□□□ -0.67
PTPRF-203ENST00000372407 FMO6PO60774 539 aa10.87□□□□□ -0.67
PTPRF-203ENST00000372407 TRAPPC6AO75865 159 aa10.87□□□□□ -0.67
PTPRF-203ENST00000372407 CYP17A1P05093 508 aa10.87□□□□□ -0.67
PTPRF-203ENST00000372407 FOXA1P55317 472 aa10.87□□□□□ -0.67
PTPRF-203ENST00000372407 DHCR24Q15392 516 aa10.87□□□□□ -0.67
PTPRF-203ENST00000372407 LRIF1Q5T3J3 769 aa10.87□□□□□ -0.67
PTPRF-203ENST00000372407 IER5LQ5T953 404 aa10.87□□□□□ -0.67
PTPRF-203ENST00000372407 FIGNL1Q6PIW4 674 aa10.87□□□□□ -0.67
PTPRF-203ENST00000372407 ZNF440Q8IYI8 595 aa10.87□□□□□ -0.67
PTPRF-203ENST00000372407 METTL25Q8N6Q8 603 aa10.87□□□□□ -0.67
PTPRF-203ENST00000372407 CSNK1A1LQ8N752 337 aa10.87□□□□□ -0.67
PTPRF-203ENST00000372407 ZDHHC12Q96GR4 267 aa10.87□□□□□ -0.67
PTPRF-203ENST00000372407 SHDQ96IW2 340 aa10.87□□□□□ -0.67
PTPRF-203ENST00000372407 HYLS1Q96M11 299 aa10.87□□□□□ -0.67
PTPRF-203ENST00000372407 ZNF300Q96RE9 604 aaPredicted RBP10.87□□□□□ -0.67
PTPRF-203ENST00000372407 IL21RQ9HBE5 538 aa10.87□□□□□ -0.67
PTPRF-203ENST00000372407 DCAF13Q9NV06 445 aaKnown RBP10.87□□□□□ -0.67
PTPRF-203ENST00000372407 WBP1LQ9NX94 342 aa10.87□□□□□ -0.67
PTPRF-203ENST00000372407 BTNL2Q9UIR0 455 aa10.87□□□□□ -0.67
PTPRF-203ENST00000372407 H3BMQ9 156 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms