RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 GPX3P22352 226 aa12.74□□□□□ -0.37
SSR4-202ENST00000370085 PTGER1P34995 402 aa12.74□□□□□ -0.37
SSR4-202ENST00000370085 CD96P40200 585 aa12.74□□□□□ -0.37
SSR4-202ENST00000370085 PPICP45877 212 aa12.74□□□□□ -0.37
SSR4-202ENST00000370085 NR0B1P51843 470 aaKnown RBP12.74□□□□□ -0.37
SSR4-202ENST00000370085 NME5P56597 212 aa12.74□□□□□ -0.37
SSR4-202ENST00000370085 UFM1P61960 85 aa12.74□□□□□ -0.37
SSR4-202ENST00000370085 ZNF155Q12901 538 aaPredicted RBP12.74□□□□□ -0.37
SSR4-202ENST00000370085 INAQ16352 499 aa12.74□□□□□ -0.37
SSR4-202ENST00000370085 FAM174BQ3ZCQ3 159 aa12.74□□□□□ -0.37
SSR4-202ENST00000370085 NADK2Q4G0N4 442 aa12.74□□□□□ -0.37
SSR4-202ENST00000370085 ZNF766Q5HY98 468 aa12.74□□□□□ -0.37
SSR4-202ENST00000370085 METTL21CQ5VZV1 264 aa12.74□□□□□ -0.37
SSR4-202ENST00000370085 TRIML2Q8N7C3 387 aa12.74□□□□□ -0.37
SSR4-202ENST00000370085 OR7G2Q8NG99 324 aa12.74□□□□□ -0.37
SSR4-202ENST00000370085 OR56A1Q8NGH5 318 aa12.74□□□□□ -0.37
SSR4-202ENST00000370085 EBF4Q9BQW3 602 aa12.74□□□□□ -0.37
SSR4-202ENST00000370085 RMND5AQ9H871 391 aa12.74□□□□□ -0.37
SSR4-202ENST00000370085 TRIM45Q9H8W5 580 aaPredicted RBP12.74□□□□□ -0.37
SSR4-202ENST00000370085 LIN28AQ9H9Z2 209 aaKnown RBP12.74□□□□□ -0.37
SSR4-202ENST00000370085 SDR39U1Q9NRG7 319 aaPredicted RBP12.74□□□□□ -0.37
SSR4-202ENST00000370085 TMEM45AQ9NWC5 275 aa12.74□□□□□ -0.37
SSR4-202ENST00000370085 ANKRD10Q9NXR5 420 aa12.74□□□□□ -0.37
SSR4-202ENST00000370085 MRTO4Q9UKD2 239 aaKnown RBP12.74□□□□□ -0.37
SSR4-202ENST00000370085 FRG2CA6NGY1 282 aa12.73□□□□□ -0.37
SSR4-202ENST00000370085 TMEM200CA6NKL6 621 aa12.73□□□□□ -0.37
SSR4-202ENST00000370085 TTLL8A6PVC2 850 aa12.73□□□□□ -0.37
SSR4-202ENST00000370085 UPK1AO00322 258 aa12.73□□□□□ -0.37
SSR4-202ENST00000370085 ANKRD28O15084 1053 aa12.73□□□□□ -0.37
SSR4-202ENST00000370085 ERN1O75460 977 aaKnown RBP12.73□□□□□ -0.37
SSR4-202ENST00000370085 CLPSP04118 112 aa12.73□□□□□ -0.37
SSR4-202ENST00000370085 PGRP06401 933 aa12.73□□□□□ -0.37
SSR4-202ENST00000370085 DRD5P21918 477 aa12.73□□□□□ -0.37
SSR4-202ENST00000370085 SOX3P41225 446 aa12.73□□□□□ -0.37
SSR4-202ENST00000370085 PRIM2P49643 509 aa12.73□□□□□ -0.37
SSR4-202ENST00000370085 EMDP50402 254 aa12.73□□□□□ -0.37
SSR4-202ENST00000370085 ATP4BP51164 291 aa12.73□□□□□ -0.37
SSR4-202ENST00000370085 ARFIP2P53365 341 aa12.73□□□□□ -0.37
SSR4-202ENST00000370085 PRKAG1P54619 331 aa12.73□□□□□ -0.37
SSR4-202ENST00000370085 MRPS22P82650 360 aaKnown RBP12.73□□□□□ -0.37
SSR4-202ENST00000370085 SQLEQ14534 574 aa12.73□□□□□ -0.37
SSR4-202ENST00000370085 MAPKAPK3Q16644 382 aa12.73□□□□□ -0.37
SSR4-202ENST00000370085 PRSS53Q2L4Q9 553 aa12.73□□□□□ -0.37
SSR4-202ENST00000370085 TMEM198Q66K66 360 aa12.73□□□□□ -0.37
SSR4-202ENST00000370085 OR4F3Q6IEY1 312 aa12.73□□□□□ -0.37
SSR4-202ENST00000370085 ZCCHC12Q6PEW1 402 aa12.73□□□□□ -0.37
SSR4-202ENST00000370085 IL20RBQ6UXL0 311 aa12.73□□□□□ -0.37
SSR4-202ENST00000370085 TMEM64Q6YI46 380 aa12.73□□□□□ -0.37
SSR4-202ENST00000370085 RTL4Q6ZR62 310 aa12.73□□□□□ -0.37
SSR4-202ENST00000370085 AMER2Q8N7J2 671 aa12.73□□□□□ -0.37
SSR4-202ENST00000370085 GOLM1Q8NBJ4 401 aa12.73□□□□□ -0.37
SSR4-202ENST00000370085 NUP43Q8NFH3 380 aa12.73□□□□□ -0.37
SSR4-202ENST00000370085 SFXN5Q8TD22 340 aa12.73□□□□□ -0.37
SSR4-202ENST00000370085 ADIPOR1Q96A54 375 aa12.73□□□□□ -0.37
SSR4-202ENST00000370085 SPACA9Q96E40 222 aaPredicted RBP12.73□□□□□ -0.37
SSR4-202ENST00000370085 THOC1Q96FV9 657 aaKnown RBP12.73□□□□□ -0.37
SSR4-202ENST00000370085 CHMP6Q96FZ7 201 aa12.73□□□□□ -0.37
SSR4-202ENST00000370085 MARK4Q96L34 752 aa12.73□□□□□ -0.37
SSR4-202ENST00000370085 MS4A4EQ96PG1 132 aa12.73□□□□□ -0.37
SSR4-202ENST00000370085 OR52E6Q96RD3 313 aa12.73□□□□□ -0.37
SSR4-202ENST00000370085 ITPAQ9BY32 194 aa12.73□□□□□ -0.37
SSR4-202ENST00000370085 FOLH1BQ9HBA9 442 aa12.73□□□□□ -0.37
SSR4-202ENST00000370085 Q9N2J8 555 aa12.73□□□□□ -0.37
SSR4-202ENST00000370085 ZCCHC3Q9NUD5 404 aaKnown RBP12.73□□□□□ -0.37
SSR4-202ENST00000370085 KLF13Q9Y2Y9 288 aaPredicted RBP12.73□□□□□ -0.37
SSR4-202ENST00000370085 OR10H1Q9Y4A9 318 aa12.73□□□□□ -0.37
SSR4-202ENST00000370085 FAM234BA2RU67 622 aa12.72□□□□□ -0.37
SSR4-202ENST00000370085 KLRC4-KLRK1H3BQV0 150 aa12.72□□□□□ -0.37
SSR4-202ENST00000370085 MAN1A2O60476 641 aa12.72□□□□□ -0.37
SSR4-202ENST00000370085 ABCB7O75027 752 aa12.72□□□□□ -0.37
SSR4-202ENST00000370085 C6orf47O95873 294 aa12.72□□□□□ -0.37
SSR4-202ENST00000370085 P04436 131 aa12.72□□□□□ -0.37
SSR4-202ENST00000370085 SP1P08047 785 aa12.72□□□□□ -0.37
SSR4-202ENST00000370085 ABCB1P08183 1280 aaPredicted RBP12.72□□□□□ -0.37
SSR4-202ENST00000370085 NAGAP17050 411 aa12.72□□□□□ -0.37
SSR4-202ENST00000370085 EFNA1P20827 205 aaPredicted RBP12.72□□□□□ -0.37
SSR4-202ENST00000370085 SOAT1P35610 550 aa12.72□□□□□ -0.37
SSR4-202ENST00000370085 CD97P48960 835 aa12.72□□□□□ -0.37
SSR4-202ENST00000370085 CCT3P49368 545 aaKnown RBP12.72□□□□□ -0.37
SSR4-202ENST00000370085 MRPL19P49406 292 aaKnown RBP12.72□□□□□ -0.37
SSR4-202ENST00000370085 CDK9P50750 372 aaKnown RBP12.72□□□□□ -0.37
SSR4-202ENST00000370085 POLR2JP52435 117 aaKnown RBP12.72□□□□□ -0.37
SSR4-202ENST00000370085 PSMD4P55036 377 aaKnown RBP12.72□□□□□ -0.37
SSR4-202ENST00000370085 KCNK10P57789 538 aa12.72□□□□□ -0.37
SSR4-202ENST00000370085 PLCXD2Q0VAA5 305 aa12.72□□□□□ -0.37
SSR4-202ENST00000370085 TP53BP2Q13625 1128 aa12.72□□□□□ -0.37
SSR4-202ENST00000370085 PLEKHN1Q494U1 663 aaPredicted RBP12.72□□□□□ -0.37
SSR4-202ENST00000370085 SPANXN4Q5MJ08 99 aa12.72□□□□□ -0.37
SSR4-202ENST00000370085 FHL5Q5TD97 284 aa12.72□□□□□ -0.37
SSR4-202ENST00000370085 SPINK14Q6IE38 97 aa12.72□□□□□ -0.37
SSR4-202ENST00000370085 SLC25A25Q6KCM7 469 aa12.72□□□□□ -0.37
SSR4-202ENST00000370085 RPUSD3Q6P087 351 aaKnown RBP12.72□□□□□ -0.37
SSR4-202ENST00000370085 MSANTD1Q6ZTZ1 278 aa12.72□□□□□ -0.37
SSR4-202ENST00000370085 PRICKLE2Q7Z3G6 844 aa12.72□□□□□ -0.37
SSR4-202ENST00000370085 ZNF843Q8N446 348 aa12.72□□□□□ -0.37
SSR4-202ENST00000370085 ZNF441Q8N8Z8 693 aa12.72□□□□□ -0.37
SSR4-202ENST00000370085 CDRT4Q8N9R6 151 aa12.72□□□□□ -0.37
SSR4-202ENST00000370085 MDS2Q8NDY4 140 aa12.72□□□□□ -0.37
SSR4-202ENST00000370085 CATSPER1Q8NEC5 780 aa12.72□□□□□ -0.37
SSR4-202ENST00000370085 OR4A15Q8NGL6 344 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms