RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 CIDEAO60543 219 aa3.59□□□□□ -1.84
SYNE1-207ENST00000367255 VIPP01282 170 aa3.59□□□□□ -1.84
SYNE1-207ENST00000367255 CLEC3BP05452 202 aa3.59□□□□□ -1.84
SYNE1-207ENST00000367255 PPP1R8Q12972 351 aaKnown RBP3.59□□□□□ -1.84
SYNE1-207ENST00000367255 ZNF571Q7Z3V5 609 aaPredicted RBP3.59□□□□□ -1.84
SYNE1-207ENST00000367255 CISD2Q8N5K1 135 aaKnown RBP3.59□□□□□ -1.84
SYNE1-207ENST00000367255 CCDC71LQ8N9Z2 235 aa3.59□□□□□ -1.84
SYNE1-207ENST00000367255 OR5T3Q8NGG3 340 aa3.59□□□□□ -1.84
SYNE1-207ENST00000367255 LCN9Q8WX39 176 aa3.59□□□□□ -1.84
SYNE1-207ENST00000367255 COQ10AQ96MF6 247 aa3.59□□□□□ -1.84
SYNE1-207ENST00000367255 SLC46A1Q96NT5 459 aa3.59□□□□□ -1.84
SYNE1-207ENST00000367255 TAPBPLQ9BX59 468 aa3.59□□□□□ -1.84
SYNE1-207ENST00000367255 POU2F3Q9UKI9 436 aa3.59□□□□□ -1.84
SYNE1-207ENST00000367255 OR2B3O76000 313 aa3.59□□□□□ -1.84
SYNE1-207ENST00000367255 TPOP07202 933 aa3.59□□□□□ -1.84
SYNE1-207ENST00000367255 PSEN2P49810 448 aa3.59□□□□□ -1.84
SYNE1-207ENST00000367255 TPPP2P59282 170 aa3.59□□□□□ -1.84
SYNE1-207ENST00000367255 AMHR2Q16671 573 aa3.59□□□□□ -1.84
SYNE1-207ENST00000367255 RPTNQ6XPR3 784 aa3.59□□□□□ -1.84
SYNE1-207ENST00000367255 SOCS4Q8WXH5 440 aa3.59□□□□□ -1.84
SYNE1-207ENST00000367255 AP5M1Q9H0R1 490 aa3.59□□□□□ -1.84
SYNE1-207ENST00000367255 TDRD3Q9H7E2 651 aaKnown RBP3.59□□□□□ -1.84
SYNE1-207ENST00000367255 QRICH2Q9H0J4 1663 aa3.59□□□□□ -1.84
SYNE1-207ENST00000367255 PMCHP20382 165 aa3.59□□□□□ -1.84
SYNE1-207ENST00000367255 MDH2P40926 338 aaKnown RBP3.59□□□□□ -1.84
SYNE1-207ENST00000367255 HTR2BP41595 481 aa3.59□□□□□ -1.84
SYNE1-207ENST00000367255 INHBEP58166 350 aa3.59□□□□□ -1.84
SYNE1-207ENST00000367255 CLINT1Q14677 625 aa3.59□□□□□ -1.84
SYNE1-207ENST00000367255 TARBP2Q15633 366 aaKnown RBP3.59□□□□□ -1.84
SYNE1-207ENST00000367255 SMTNL2Q2TAL5 461 aa3.59□□□□□ -1.84
SYNE1-207ENST00000367255 WASH2PQ6VEQ5 465 aa3.59□□□□□ -1.84
SYNE1-207ENST00000367255 ZSCAN1Q8NBB4 408 aa3.59□□□□□ -1.84
SYNE1-207ENST00000367255 OR51A2Q8NGJ7 313 aa3.59□□□□□ -1.84
SYNE1-207ENST00000367255 PSMG2Q969U7 264 aa3.59□□□□□ -1.84
SYNE1-207ENST00000367255 LIMD1Q9UGP4 676 aa3.59□□□□□ -1.84
SYNE1-207ENST00000367255 MAGEB17A8MXT2 336 aa3.59□□□□□ -1.84
SYNE1-207ENST00000367255 HEXBP07686 556 aa3.59□□□□□ -1.84
SYNE1-207ENST00000367255 MIIPQ5JXC2 388 aa3.59□□□□□ -1.84
SYNE1-207ENST00000367255 MCATQ8IVS2 390 aaKnown RBP3.59□□□□□ -1.84
SYNE1-207ENST00000367255 SPPL2AQ8TCT8 520 aa3.59□□□□□ -1.84
SYNE1-207ENST00000367255 ST8SIA4Q92187 359 aa3.59□□□□□ -1.84
SYNE1-207ENST00000367255 HAS2Q92819 552 aa3.59□□□□□ -1.84
SYNE1-207ENST00000367255 LGALS12Q96DT0 336 aa3.59□□□□□ -1.84
SYNE1-207ENST00000367255 TRBV23OR9-2A0A075B6M9 112 aa3.59□□□□□ -1.84
SYNE1-207ENST00000367255 LCKP06239 509 aa3.59□□□□□ -1.84
SYNE1-207ENST00000367255 DCNP07585 359 aaKnown RBP3.59□□□□□ -1.84
SYNE1-207ENST00000367255 OXTRP30559 389 aa3.59□□□□□ -1.84
SYNE1-207ENST00000367255 SOAT1P35610 550 aa3.59□□□□□ -1.84
SYNE1-207ENST00000367255 SEMG2Q02383 582 aa3.59□□□□□ -1.84
SYNE1-207ENST00000367255 MICAQ29983 383 aa3.59□□□□□ -1.84
SYNE1-207ENST00000367255 MBOAT1Q6ZNC8 495 aa3.59□□□□□ -1.84
SYNE1-207ENST00000367255 HPDLQ96IR7 371 aa3.59□□□□□ -1.84
SYNE1-207ENST00000367255 ACTR3CQ9C0K3 210 aaPredicted RBP3.59□□□□□ -1.84
SYNE1-207ENST00000367255 ACSM4P0C7M7 580 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 GRB10Q13322 594 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 SF1Q15637 639 aaKnown RBP3.58□□□□□ -1.84
SYNE1-207ENST00000367255 MSANTD2Q6P1R3 559 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 TMEM205Q6UW68 189 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 ZNF280BQ86YH2 543 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 SLC15A4Q8N697 577 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 APH1BQ8WW43 257 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 TMEM47Q9BQJ4 181 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 EQTNQ9NQ60 294 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 P2RX2Q9UBL9 471 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 MMP24Q9Y5R2 645 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 SERTM1A2A2V5 107 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 LILRB5O75023 590 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 IGHEP01854 428 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 MTNR1AP48039 350 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 RBBP7Q16576 425 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 SLC27A1Q6PCB7 646 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 LRRC58Q96CX6 371 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 IPPKQ9H8X2 491 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 TMED3Q9Y3Q3 217 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 A0A0A6YYJ9 748 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 A0A1B0GW15 77 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 A0A1W2PPL8 197 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 OR1I1O60431 355 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 LCATP04180 440 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 CHRNB1P11230 501 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 GZMKP49863 264 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 MLLT1Q03111 559 aaPredicted RBP3.58□□□□□ -1.84
SYNE1-207ENST00000367255 MPEG1Q2M385 716 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 SSX6Q7RTT6 188 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 TUBA4BQ9H853 241 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 ADAM11O75078 769 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 HIST1H2ABP04908 130 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 ZNF234Q14588 700 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 HIST3H2AQ7L7L0 130 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 HIST1H2ACQ93077 130 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 SCLYQ96I15 445 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 TMEM39BQ9GZU3 492 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.58□□□□□ -1.84
SYNE1-207ENST00000367255 CAPN3P20807 821 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 PRKACGP22612 351 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 TUBG1P23258 451 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 CD1CP29017 333 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 SLC5A2P31639 672 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 MED22Q15528 200 aa3.58□□□□□ -1.84
SYNE1-207ENST00000367255 LRFN4Q6PJG9 635 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms