RNA–Protein interactions for RNA: ENST00000367178.7

SCAF8-201, Transcript of SR-related CTD associated factor 8, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCAF8, Length 5,057 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-201ENST00000367178 TRAPPC13A5PLN9 417 aa15.68■□□□□ 0.1
SCAF8-201ENST00000367178 STSP08842 583 aa15.68■□□□□ 0.1
SCAF8-201ENST00000367178 MC3RP41968 323 aa15.68■□□□□ 0.1
SCAF8-201ENST00000367178 ZNF84P51523 738 aa15.68■□□□□ 0.1
SCAF8-201ENST00000367178 MAD2L1BPQ15013 274 aaPredicted RBP15.68■□□□□ 0.1
SCAF8-201ENST00000367178 LPAL2Q16609 132 aa15.68■□□□□ 0.1
SCAF8-201ENST00000367178 KCTD11Q693B1 232 aa15.68■□□□□ 0.1
SCAF8-201ENST00000367178 PGBD5Q8N414 524 aa15.68■□□□□ 0.1
SCAF8-201ENST00000367178 SLC5A8Q8N695 610 aa15.68■□□□□ 0.1
SCAF8-201ENST00000367178 OR6C4Q8NGE1 309 aa15.68■□□□□ 0.1
SCAF8-201ENST00000367178 PDLIM5Q96HC4 596 aaKnown RBP15.68■□□□□ 0.1
SCAF8-201ENST00000367178 TIMM29Q9BSF4 260 aa15.68■□□□□ 0.1
SCAF8-201ENST00000367178 DPAGT1Q9H3H5 408 aa15.68■□□□□ 0.1
SCAF8-201ENST00000367178 RNASET2O00584 256 aaKnown RBP15.68■□□□□ 0.1
SCAF8-201ENST00000367178 DNAJB5O75953 348 aa15.68■□□□□ 0.1
SCAF8-201ENST00000367178 GCAP28676 217 aa15.68■□□□□ 0.1
SCAF8-201ENST00000367178 MFSD6LQ8IWD5 586 aa15.68■□□□□ 0.1
SCAF8-201ENST00000367178 ISOC1Q96CN7 298 aa15.68■□□□□ 0.1
SCAF8-201ENST00000367178 RTP3Q9BQQ7 232 aa15.68■□□□□ 0.1
SCAF8-201ENST00000367178 HOXD1Q9GZZ0 328 aa15.68■□□□□ 0.1
SCAF8-201ENST00000367178 PRSS38A1L453 326 aa15.67■□□□□ 0.1
SCAF8-201ENST00000367178 C1orf105O95561 183 aa15.67■□□□□ 0.1
SCAF8-201ENST00000367178 HLCSP50747 726 aa15.67■□□□□ 0.1
SCAF8-201ENST00000367178 SPHARQ15513 63 aa15.67■□□□□ 0.1
SCAF8-201ENST00000367178 TANGO2Q6ICL3 276 aa15.67■□□□□ 0.1
SCAF8-201ENST00000367178 DDX60Q8IY21 1712 aaKnown RBP15.67■□□□□ 0.1
SCAF8-201ENST00000367178 ACBD7Q8N6N7 88 aa15.67■□□□□ 0.1
SCAF8-201ENST00000367178 WACQ9BTA9 647 aa15.67■□□□□ 0.1
SCAF8-201ENST00000367178 SORBS1Q9BX66 1292 aaKnown RBP15.67■□□□□ 0.1
SCAF8-201ENST00000367178 TAS2R10Q9NYW0 307 aa15.67■□□□□ 0.1
SCAF8-201ENST00000367178 CMAHPQ9Y471 501 aa15.67■□□□□ 0.1
SCAF8-201ENST00000367178 OR14I1A6ND48 311 aa15.67■□□□□ 0.1
SCAF8-201ENST00000367178 RDH16O75452 317 aa15.67■□□□□ 0.1
SCAF8-201ENST00000367178 BMP2P12643 396 aa15.67■□□□□ 0.1
SCAF8-201ENST00000367178 TMBIM6P55061 237 aa15.67■□□□□ 0.1
SCAF8-201ENST00000367178 RTN4RL1Q86UN2 441 aaPredicted RBP15.67■□□□□ 0.1
SCAF8-201ENST00000367178 OR9A2Q8NGT5 310 aa15.67■□□□□ 0.1
SCAF8-201ENST00000367178 METTL2AQ96IZ6 378 aaKnown RBP15.67■□□□□ 0.1
SCAF8-201ENST00000367178 SCGB3A2Q96PL1 93 aa15.67■□□□□ 0.1
SCAF8-201ENST00000367178 CITED4Q96RK1 184 aa15.67■□□□□ 0.1
SCAF8-201ENST00000367178 ARHGAP9Q9BRR9 750 aa15.67■□□□□ 0.1
SCAF8-201ENST00000367178 FUZQ9BT04 418 aa15.67■□□□□ 0.1
SCAF8-201ENST00000367178 TIGARQ9NQ88 270 aa15.67■□□□□ 0.1
SCAF8-201ENST00000367178 CCDC59Q9P031 241 aaKnown RBP15.67■□□□□ 0.1
SCAF8-201ENST00000367178 A0A0A6YYC8 382 aaPredicted RBP15.67■□□□□ 0.1
SCAF8-201ENST00000367178 MROH6A6NGR9 719 aa15.67■□□□□ 0.1
SCAF8-201ENST00000367178 I3L1I5 382 aaPredicted RBP15.67■□□□□ 0.1
SCAF8-201ENST00000367178 MTRF1O75570 445 aaKnown RBP15.67■□□□□ 0.1
SCAF8-201ENST00000367178 SEMA3DO95025 777 aa15.67■□□□□ 0.1
SCAF8-201ENST00000367178 MRPS21P82921 87 aaKnown RBP15.67■□□□□ 0.1
SCAF8-201ENST00000367178 NRMQ8IXM6 262 aa15.67■□□□□ 0.1
SCAF8-201ENST00000367178 PITHD1Q9GZP4 211 aaPredicted RBP15.67■□□□□ 0.1
SCAF8-201ENST00000367178 ANKRD12Q6UB98 2062 aa15.67■□□□□ 0.1
SCAF8-201ENST00000367178 GRXCR2A6NFK2 248 aa15.67■□□□□ 0.1
SCAF8-201ENST00000367178 VEZF1Q14119 521 aa15.67■□□□□ 0.1
SCAF8-201ENST00000367178 RPS26P11Q5JNZ5 115 aaPredicted RBP15.67■□□□□ 0.1
SCAF8-201ENST00000367178 GLT8D1Q68CQ7 371 aa15.67■□□□□ 0.1
SCAF8-201ENST00000367178 NXPE2Q96DL1 559 aa15.67■□□□□ 0.1
SCAF8-201ENST00000367178 MACROD1Q9BQ69 325 aa15.67■□□□□ 0.1
SCAF8-201ENST00000367178 ENAMQ9NRM1 1142 aa15.67■□□□□ 0.1
SCAF8-201ENST00000367178 THOC7Q6I9Y2 204 aaKnown RBP15.66■□□□□ 0.1
SCAF8-201ENST00000367178 UBQLNLQ8IYU4 475 aa15.66■□□□□ 0.1
SCAF8-201ENST00000367178 C3orf30Q96M34 536 aa15.66■□□□□ 0.1
SCAF8-201ENST00000367178 TUBA1CQ9BQE3 449 aa15.66■□□□□ 0.1
SCAF8-201ENST00000367178 MMP27Q9H306 513 aa15.66■□□□□ 0.1
SCAF8-201ENST00000367178 PLEKHA6Q9Y2H5 1048 aa15.66■□□□□ 0.1
SCAF8-201ENST00000367178 HSPE1-MOB4S4R3N1 261 aa15.66■□□□□ 0.1
SCAF8-201ENST00000367178 OTX2P32243 289 aa15.66■□□□□ 0.1
SCAF8-201ENST00000367178 HSD17B12Q53GQ0 312 aa15.66■□□□□ 0.1
SCAF8-201ENST00000367178 SPPL3Q8TCT6 385 aa15.66■□□□□ 0.1
SCAF8-201ENST00000367178 FAM46AQ96IP4 442 aaKnown RBP15.66■□□□□ 0.1
SCAF8-201ENST00000367178 BMFQ96LC9 184 aa15.66■□□□□ 0.1
SCAF8-201ENST00000367178 PCDHB16Q9NRJ7 776 aa15.66■□□□□ 0.1
SCAF8-201ENST00000367178 EIF3KQ9UBQ5 218 aaKnown RBP15.66■□□□□ 0.1
SCAF8-201ENST00000367178 CNOT11Q9UKZ1 510 aaKnown RBP15.66■□□□□ 0.1
SCAF8-201ENST00000367178 PCDHGA10Q9Y5H3 936 aa15.66■□□□□ 0.1
SCAF8-201ENST00000367178 SH3PXD2BA1X283 911 aa15.66■□□□□ 0.1
SCAF8-201ENST00000367178 DLGAP1O14490 977 aa15.66■□□□□ 0.1
SCAF8-201ENST00000367178 ABLIM3O94929 683 aa15.66■□□□□ 0.1
SCAF8-201ENST00000367178 FCER2P06734 321 aa15.66■□□□□ 0.1
SCAF8-201ENST00000367178 CDKL1Q00532 357 aa15.66■□□□□ 0.1
SCAF8-201ENST00000367178 KHSRPQ92945 711 aaKnown RBP eCLIP15.66■□□□□ 0.12e-8■■■□□ 16.6
SCAF8-201ENST00000367178 GPR45Q9Y5Y3 372 aa15.66■□□□□ 0.1
SCAF8-201ENST00000367178 TEX46H3BTG2 121 aa15.66■□□□□ 0.1
SCAF8-201ENST00000367178 PLOD2O00469 737 aa15.66■□□□□ 0.1
SCAF8-201ENST00000367178 T-ENOLP0DO92 83 aa15.66■□□□□ 0.1
SCAF8-201ENST00000367178 VAMP1P23763 118 aa15.66■□□□□ 0.1
SCAF8-201ENST00000367178 SGSHP51688 502 aa15.66■□□□□ 0.1
SCAF8-201ENST00000367178 SELENOWP63302 87 aa15.66■□□□□ 0.1
SCAF8-201ENST00000367178 ZNF829Q3KNS6 432 aaPredicted RBP15.66■□□□□ 0.1
SCAF8-201ENST00000367178 CARD17Q5XLA6 110 aa15.66■□□□□ 0.1
SCAF8-201ENST00000367178 TSPYL5Q86VY4 417 aaPredicted RBP15.66■□□□□ 0.1
SCAF8-201ENST00000367178 VWA5B2Q8N398 1253 aa15.66■□□□□ 0.1
SCAF8-201ENST00000367178 OR2L8Q8NGY9 312 aa15.66■□□□□ 0.1
SCAF8-201ENST00000367178 SLC41A3Q96GZ6 507 aa15.66■□□□□ 0.1
SCAF8-201ENST00000367178 TRPV4Q9HBA0 871 aa15.66■□□□□ 0.1
SCAF8-201ENST00000367178 MYNNQ9NPC7 610 aa15.66■□□□□ 0.1
SCAF8-201ENST00000367178 MYH14Q7Z406 1995 aaKnown RBP15.66■□□□□ 0.1
SCAF8-201ENST00000367178 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.65■□□□□ 0.1
SCAF8-201ENST00000367178 M0R3H8 397 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms