RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 CREB3L2Q70SY1 520 aa13.9□□□□□ -0.18
PRKN-204ENST00000366896 CFAP206Q8IYR0 622 aa13.9□□□□□ -0.18
PRKN-204ENST00000366896 CAMKK1Q8N5S9 505 aa13.9□□□□□ -0.18
PRKN-204ENST00000366896 CLDN22Q8N7P3 220 aa13.9□□□□□ -0.18
PRKN-204ENST00000366896 NLGN4YQ8NFZ3 816 aaPredicted RBP13.9□□□□□ -0.18
PRKN-204ENST00000366896 NEURL3Q96EH8 262 aa13.9□□□□□ -0.18
PRKN-204ENST00000366896 MAP6Q96JE9 813 aa13.9□□□□□ -0.18
PRKN-204ENST00000366896 RSPO3Q9BXY4 272 aaPredicted RBP13.9□□□□□ -0.18
PRKN-204ENST00000366896 PLEKHB1Q9UF11 243 aaPredicted RBP13.9□□□□□ -0.18
PRKN-204ENST00000366896 IL36AQ9UHA7 158 aa13.9□□□□□ -0.18
PRKN-204ENST00000366896 C17orf113A0A1B0GUU1 675 aa13.89□□□□□ -0.19
PRKN-204ENST00000366896 WWP2O00308 870 aa13.89□□□□□ -0.19
PRKN-204ENST00000366896 FFAR1O14842 300 aa13.89□□□□□ -0.19
PRKN-204ENST00000366896 SHOXO15266 292 aa13.89□□□□□ -0.19
PRKN-204ENST00000366896 PDE9AO76083 593 aa13.89□□□□□ -0.19
PRKN-204ENST00000366896 HBQ1P09105 142 aa13.89□□□□□ -0.19
PRKN-204ENST00000366896 NAT1P18440 290 aa13.89□□□□□ -0.19
PRKN-204ENST00000366896 NNMTP40261 264 aa13.89□□□□□ -0.19
PRKN-204ENST00000366896 SOX9P48436 509 aa13.89□□□□□ -0.19
PRKN-204ENST00000366896 LIM2P55344 173 aa13.89□□□□□ -0.19
PRKN-204ENST00000366896 MXD1Q05195 221 aa13.89□□□□□ -0.19
PRKN-204ENST00000366896 PUM1Q14671 1186 aaKnown RBP eCLIP13.89□□□□□ -0.19
PRKN-204ENST00000366896 SLC34A3Q8N130 599 aa13.89□□□□□ -0.19
PRKN-204ENST00000366896 KLHL6Q8WZ60 621 aa13.89□□□□□ -0.19
PRKN-204ENST00000366896 TMEM80Q96HE8 168 aa13.89□□□□□ -0.19
PRKN-204ENST00000366896 MND1Q9BWT6 205 aa13.89□□□□□ -0.19
PRKN-204ENST00000366896 C11orf16Q9NQ32 467 aa13.89□□□□□ -0.19
PRKN-204ENST00000366896 AHSPQ9NZD4 102 aa13.89□□□□□ -0.19
PRKN-204ENST00000366896 REV1Q9UBZ9 1251 aa13.89□□□□□ -0.19
PRKN-204ENST00000366896 KCNN3Q9UGI6 736 aa13.89□□□□□ -0.19
PRKN-204ENST00000366896 MYO10Q9HD67 2058 aa13.89□□□□□ -0.19
PRKN-204ENST00000366896 TRBV4-1A0A0J9YWV2 114 aa13.89□□□□□ -0.19
PRKN-204ENST00000366896 PRRT4C9JH25 899 aa13.89□□□□□ -0.19
PRKN-204ENST00000366896 K7ESM1 405 aa13.89□□□□□ -0.19
PRKN-204ENST00000366896 AKR7A2O43488 359 aa13.89□□□□□ -0.19
PRKN-204ENST00000366896 PI15O43692 258 aa13.89□□□□□ -0.19
PRKN-204ENST00000366896 IGFBP1P08833 259 aaPredicted RBP13.89□□□□□ -0.19
PRKN-204ENST00000366896 TSPAN19P0C672 248 aa13.89□□□□□ -0.19
PRKN-204ENST00000366896 FEN1P39748 380 aaKnown RBP13.89□□□□□ -0.19
PRKN-204ENST00000366896 BTBD16Q32M84 506 aa13.89□□□□□ -0.19
PRKN-204ENST00000366896 ESCO2Q56NI9 601 aa13.89□□□□□ -0.19
PRKN-204ENST00000366896 C12orf73Q69YU5 71 aa13.89□□□□□ -0.19
PRKN-204ENST00000366896 PLET1Q6UQ28 207 aa13.89□□□□□ -0.19
PRKN-204ENST00000366896 HSDL2Q6YN16 418 aa13.89□□□□□ -0.19
PRKN-204ENST00000366896 ZNF765Q7L2R6 523 aa13.89□□□□□ -0.19
PRKN-204ENST00000366896 WDR53Q7Z5U6 358 aaPredicted RBP13.89□□□□□ -0.19
PRKN-204ENST00000366896 TAGAPQ8N103 731 aa13.89□□□□□ -0.19
PRKN-204ENST00000366896 UBE2J2Q8N2K1 259 aa13.89□□□□□ -0.19
PRKN-204ENST00000366896 C2orf73Q8N5S3 287 aaPredicted RBP13.89□□□□□ -0.19
PRKN-204ENST00000366896 OR5P2Q8WZ92 322 aa13.89□□□□□ -0.19
PRKN-204ENST00000366896 ZC3HAV1LQ96H79 300 aaKnown RBP13.89□□□□□ -0.19
PRKN-204ENST00000366896 ZNF514Q96K75 400 aaPredicted RBP13.89□□□□□ -0.19
PRKN-204ENST00000366896 IL4I1Q96RQ9 567 aa13.89□□□□□ -0.19
PRKN-204ENST00000366896 GTPBP2Q9BX10 602 aaKnown RBP13.89□□□□□ -0.19
PRKN-204ENST00000366896 UCK2Q9BZX2 261 aa13.89□□□□□ -0.19
PRKN-204ENST00000366896 SLC6A16Q9GZN6 736 aa13.89□□□□□ -0.19
PRKN-204ENST00000366896 DPEP2Q9H4A9 486 aa13.89□□□□□ -0.19
PRKN-204ENST00000366896 CXorf36Q9H7Y0 433 aa13.89□□□□□ -0.19
PRKN-204ENST00000366896 TAAR2Q9P1P5 351 aa13.89□□□□□ -0.19
PRKN-204ENST00000366896 ALG5Q9Y673 324 aa13.89□□□□□ -0.19
PRKN-204ENST00000366896 B8ZZF3 427 aa13.88□□□□□ -0.19
PRKN-204ENST00000366896 TLR4O00206 839 aa13.88□□□□□ -0.19
PRKN-204ENST00000366896 FAAHO00519 579 aa13.88□□□□□ -0.19
PRKN-204ENST00000366896 NOS1APO75052 506 aaPredicted RBP13.88□□□□□ -0.19
PRKN-204ENST00000366896 OR2B3O76000 313 aa13.88□□□□□ -0.19
PRKN-204ENST00000366896 SOD1P00441 154 aa13.88□□□□□ -0.19
PRKN-204ENST00000366896 MSL3P1P0C860 447 aa13.88□□□□□ -0.19
PRKN-204ENST00000366896 AP2S1P53680 142 aaPredicted RBP13.88□□□□□ -0.19
PRKN-204ENST00000366896 MLLT11Q13015 90 aaPredicted RBP13.88□□□□□ -0.19
PRKN-204ENST00000366896 HNRNPA0Q13151 305 aaKnown RBP13.88□□□□□ -0.19
PRKN-204ENST00000366896 PYDC2Q56P42 97 aa13.88□□□□□ -0.19
PRKN-204ENST00000366896 LCN1P1Q5VSP4 162 aa13.88□□□□□ -0.19
PRKN-204ENST00000366896 LAMTOR1Q6IAA8 161 aa13.88□□□□□ -0.19
PRKN-204ENST00000366896 PHC2Q8IXK0 858 aa13.88□□□□□ -0.19
PRKN-204ENST00000366896 NANOGP1Q8N7R0 232 aa13.88□□□□□ -0.19
PRKN-204ENST00000366896 DTD2Q96FN9 168 aa13.88□□□□□ -0.19
PRKN-204ENST00000366896 COQ10AQ96MF6 247 aa13.88□□□□□ -0.19
PRKN-204ENST00000366896 IL17FQ96PD4 163 aa13.88□□□□□ -0.19
PRKN-204ENST00000366896 TEFMQ96QE5 360 aaKnown RBP13.88□□□□□ -0.19
PRKN-204ENST00000366896 NRTNQ99748 197 aa13.88□□□□□ -0.19
PRKN-204ENST00000366896 POLR2J2Q9GZM3 115 aaKnown RBP13.88□□□□□ -0.19
PRKN-204ENST00000366896 NEUROD4Q9HD90 331 aa13.88□□□□□ -0.19
PRKN-204ENST00000366896 TXNL4BQ9NX01 149 aaKnown RBP13.88□□□□□ -0.19
PRKN-204ENST00000366896 ACAD8Q9UKU7 415 aa13.88□□□□□ -0.19
PRKN-204ENST00000366896 TMCC3Q9ULS5 477 aa13.88□□□□□ -0.19
PRKN-204ENST00000366896 PLD2O14939 933 aa13.88□□□□□ -0.19
PRKN-204ENST00000366896 PROM1O43490 865 aa13.88□□□□□ -0.19
PRKN-204ENST00000366896 SEMA7AO75326 666 aa13.88□□□□□ -0.19
PRKN-204ENST00000366896 SOX14O95416 240 aa13.88□□□□□ -0.19
PRKN-204ENST00000366896 HLA-DQB1P01920 261 aa13.88□□□□□ -0.19
PRKN-204ENST00000366896 UBL4AP11441 157 aa13.88□□□□□ -0.19
PRKN-204ENST00000366896 GSTM5P46439 218 aa13.88□□□□□ -0.19
PRKN-204ENST00000366896 MAP2K3P46734 347 aa13.88□□□□□ -0.19
PRKN-204ENST00000366896 SMIM11AP58511 58 aa13.88□□□□□ -0.19
PRKN-204ENST00000366896 OCLNQ16625 522 aa13.88□□□□□ -0.19
PRKN-204ENST00000366896 SLC25A30Q5SVS4 291 aa13.88□□□□□ -0.19
PRKN-204ENST00000366896 DDI2Q5TDH0 399 aa13.88□□□□□ -0.19
PRKN-204ENST00000366896 LCTLQ6UWM7 567 aa13.88□□□□□ -0.19
PRKN-204ENST00000366896 IDO2Q6ZQW0 420 aa13.88□□□□□ -0.19
PRKN-204ENST00000366896 PARS2Q7L3T8 475 aaKnown RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms