RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 C10orf82Q8WW14 230 aa11.42□□□□□ -0.58
MRPL55-209ENST00000366735 TANKQ92844 425 aa11.42□□□□□ -0.58
MRPL55-209ENST00000366735 EXT2Q93063 718 aa11.42□□□□□ -0.58
MRPL55-209ENST00000366735 FBXL20Q96IG2 436 aa11.42□□□□□ -0.58
MRPL55-209ENST00000366735 GAL3ST4Q96RP7 486 aa11.42□□□□□ -0.58
MRPL55-209ENST00000366735 C1QTNF3Q9BXJ4 246 aa11.42□□□□□ -0.58
MRPL55-209ENST00000366735 CXXC4Q9H2H0 198 aa11.42□□□□□ -0.58
MRPL55-209ENST00000366735 RPF2Q9H7B2 306 aaKnown RBP11.42□□□□□ -0.58
MRPL55-209ENST00000366735 ZNF395Q9H8N7 513 aaPredicted RBP11.42□□□□□ -0.58
MRPL55-209ENST00000366735 WDR41Q9HAD4 459 aa11.42□□□□□ -0.58
MRPL55-209ENST00000366735 NUDT4Q9NZJ9 180 aa11.42□□□□□ -0.58
MRPL55-209ENST00000366735 ST6GALNAC2Q9UJ37 374 aa11.42□□□□□ -0.58
MRPL55-209ENST00000366735 ZNF490Q9ULM2 529 aaPredicted RBP11.42□□□□□ -0.58
MRPL55-209ENST00000366735 RAP2CQ9Y3L5 183 aa11.42□□□□□ -0.58
MRPL55-209ENST00000366735 USH1CQ9Y6N9 552 aa11.42□□□□□ -0.58
MRPL55-209ENST00000366735 SPG11Q96JI7 2443 aa11.42□□□□□ -0.58
MRPL55-209ENST00000366735 MYOCOSA0A1B0GUC4 107 aa11.41□□□□□ -0.58
MRPL55-209ENST00000366735 OR6C76A6NM76 312 aa11.41□□□□□ -0.58
MRPL55-209ENST00000366735 STX16-NPEPL1H3BU86 382 aa11.41□□□□□ -0.58
MRPL55-209ENST00000366735 STX16O14662 325 aa11.41□□□□□ -0.58
MRPL55-209ENST00000366735 TP53I11O14683 189 aa11.41□□□□□ -0.58
MRPL55-209ENST00000366735 TAPBPO15533 448 aa11.41□□□□□ -0.58
MRPL55-209ENST00000366735 OR10H2O60403 315 aa11.41□□□□□ -0.58
MRPL55-209ENST00000366735 DIAPH2O60879 1101 aa11.41□□□□□ -0.58
MRPL55-209ENST00000366735 LYPLA1O75608 230 aaPredicted RBP11.41□□□□□ -0.58
MRPL55-209ENST00000366735 CTAG2O75638 210 aa11.41□□□□□ -0.58
MRPL55-209ENST00000366735 ETHE1O95571 254 aa11.41□□□□□ -0.58
MRPL55-209ENST00000366735 HSPA4LO95757 839 aa11.41□□□□□ -0.58
MRPL55-209ENST00000366735 TBX6O95947 436 aaPredicted RBP11.41□□□□□ -0.58
MRPL55-209ENST00000366735 ALOX15P16050 662 aaPredicted RBP11.41□□□□□ -0.58
MRPL55-209ENST00000366735 GDF1P27539 372 aa11.41□□□□□ -0.58
MRPL55-209ENST00000366735 UQCRC1P31930 480 aa11.41□□□□□ -0.58
MRPL55-209ENST00000366735 PIGAP37287 484 aa11.41□□□□□ -0.58
MRPL55-209ENST00000366735 CASP2P42575 452 aa11.41□□□□□ -0.58
MRPL55-209ENST00000366735 ARFIP1P53367 373 aa11.41□□□□□ -0.58
MRPL55-209ENST00000366735 HERVK_113P63132 956 aa11.41□□□□□ -0.58
MRPL55-209ENST00000366735 RPP38P78345 283 aaKnown RBP11.41□□□□□ -0.58
MRPL55-209ENST00000366735 IGLV3-21P80748 117 aaPredicted RBP11.41□□□□□ -0.58
MRPL55-209ENST00000366735 ID2Q02363 134 aa11.41□□□□□ -0.58
MRPL55-209ENST00000366735 ZNF791Q3KP31 576 aaPredicted RBP11.41□□□□□ -0.58
MRPL55-209ENST00000366735 FLYWCH1Q4VC44 716 aa11.41□□□□□ -0.58
MRPL55-209ENST00000366735 COX20Q5RI15 118 aa11.41□□□□□ -0.58
MRPL55-209ENST00000366735 C6orf163Q5TEZ5 329 aa11.41□□□□□ -0.58
MRPL55-209ENST00000366735 KHDRBS2Q5VWX1 349 aaKnown RBP11.41□□□□□ -0.58
MRPL55-209ENST00000366735 RTL6Q6ICC9 239 aa11.41□□□□□ -0.58
MRPL55-209ENST00000366735 ADNP2Q6IQ32 1131 aa11.41□□□□□ -0.58
MRPL55-209ENST00000366735 ZNF793Q6ZN11 406 aa11.41□□□□□ -0.58
MRPL55-209ENST00000366735 CAMKMTQ7Z624 323 aa11.41□□□□□ -0.58
MRPL55-209ENST00000366735 TGIF2LYQ8IUE0 185 aa11.41□□□□□ -0.58
MRPL55-209ENST00000366735 C9orf40Q8IXQ3 194 aa11.41□□□□□ -0.58
MRPL55-209ENST00000366735 LAS2Q8IYD9 372 aa11.41□□□□□ -0.58
MRPL55-209ENST00000366735 ST13P4Q8IZP2 240 aaPredicted RBP11.41□□□□□ -0.58
MRPL55-209ENST00000366735 KIRREL3Q8IZU9 778 aa11.41□□□□□ -0.58
MRPL55-209ENST00000366735 ZNF321PQ8N8H1 164 aa11.41□□□□□ -0.58
MRPL55-209ENST00000366735 NEIL3Q8TAT5 605 aa11.41□□□□□ -0.58
MRPL55-209ENST00000366735 STON2Q8WXE9 905 aa11.41□□□□□ -0.58
MRPL55-209ENST00000366735 RGMAQ96B86 450 aa11.41□□□□□ -0.58
MRPL55-209ENST00000366735 REPS1Q96D71 796 aa11.41□□□□□ -0.58
MRPL55-209ENST00000366735 HSPBAP1Q96EW2 488 aa11.41□□□□□ -0.58
MRPL55-209ENST00000366735 SENP5Q96HI0 755 aaPredicted RBP11.41□□□□□ -0.58
MRPL55-209ENST00000366735 JSRP1Q96MG2 331 aaPredicted RBP11.41□□□□□ -0.58
MRPL55-209ENST00000366735 DOHHQ9BU89 302 aa11.41□□□□□ -0.58
MRPL55-209ENST00000366735 CNPPD1Q9BV87 410 aa11.41□□□□□ -0.58
MRPL55-209ENST00000366735 ERVK-6Q9BXR3 956 aa11.41□□□□□ -0.58
MRPL55-209ENST00000366735 CD244Q9BZW8 370 aa11.41□□□□□ -0.58
MRPL55-209ENST00000366735 NPHS2Q9NP85 383 aa11.41□□□□□ -0.58
MRPL55-209ENST00000366735 ACKR4Q9NPB9 350 aa11.41□□□□□ -0.58
MRPL55-209ENST00000366735 CCM2LQ9NUG4 571 aaPredicted RBP11.41□□□□□ -0.58
MRPL55-209ENST00000366735 OPTCQ9UBM4 332 aa11.41□□□□□ -0.58
MRPL55-209ENST00000366735 PTBP2Q9UKA9 531 aaKnown RBP11.41□□□□□ -0.58
MRPL55-209ENST00000366735 TMA7Q9Y2S6 64 aaKnown RBP11.41□□□□□ -0.58
MRPL55-209ENST00000366735 ANKHD1Q8IWZ3 2542 aaKnown RBP11.41□□□□□ -0.58
MRPL55-209ENST00000366735 SETD2Q9BYW2 2564 aaPredicted RBP11.4□□□□□ -0.58
MRPL55-209ENST00000366735 C15orf38-AP3S2A0A0A6YYH1 394 aa11.4□□□□□ -0.58
MRPL55-209ENST00000366735 SUPT3HB4E1H0 165 aa11.4□□□□□ -0.58
MRPL55-209ENST00000366735 UBXN8O00124 270 aa11.4□□□□□ -0.58
MRPL55-209ENST00000366735 RTCAO00442 366 aaKnown RBP11.4□□□□□ -0.58
MRPL55-209ENST00000366735 FGF17O60258 216 aa11.4□□□□□ -0.58
MRPL55-209ENST00000366735 SUPT3HO75486 399 aa11.4□□□□□ -0.58
MRPL55-209ENST00000366735 GOSR1O95249 250 aa11.4□□□□□ -0.58
MRPL55-209ENST00000366735 TGFB1P01137 390 aa11.4□□□□□ -0.58
MRPL55-209ENST00000366735 IL2RAP01589 272 aa11.4□□□□□ -0.58
MRPL55-209ENST00000366735 IGKV3-11P04433 115 aa11.4□□□□□ -0.58
MRPL55-209ENST00000366735 CELA3AP09093 270 aa11.4□□□□□ -0.58
MRPL55-209ENST00000366735 CD22P20273 847 aa11.4□□□□□ -0.58
MRPL55-209ENST00000366735 ADH7P40394 386 aa11.4□□□□□ -0.58
MRPL55-209ENST00000366735 NR0B1P51843 470 aaKnown RBP11.4□□□□□ -0.58
MRPL55-209ENST00000366735 DGKQP52824 942 aa11.4□□□□□ -0.58
MRPL55-209ENST00000366735 ALDH18A1P54886 795 aaKnown RBP11.4□□□□□ -0.58
MRPL55-209ENST00000366735 SLAMF1Q13291 335 aa11.4□□□□□ -0.58
MRPL55-209ENST00000366735 DDX39BQ13838 428 aaKnown RBP11.4□□□□□ -0.58
MRPL55-209ENST00000366735 E2F2Q14209 437 aa11.4□□□□□ -0.58
MRPL55-209ENST00000366735 CEBPEQ15744 281 aa11.4□□□□□ -0.58
MRPL55-209ENST00000366735 SPRED3Q2MJR0 410 aa11.4□□□□□ -0.58
MRPL55-209ENST00000366735 FBXO48Q5FWF7 155 aa11.4□□□□□ -0.58
MRPL55-209ENST00000366735 ARL13AQ5H913 290 aaPredicted RBP11.4□□□□□ -0.58
MRPL55-209ENST00000366735 CFAP157Q5JU67 520 aa11.4□□□□□ -0.58
MRPL55-209ENST00000366735 ZNF678Q5SXM1 525 aa11.4□□□□□ -0.58
MRPL55-209ENST00000366735 PRAMEF20Q5VT98 475 aa11.4□□□□□ -0.58
MRPL55-209ENST00000366735 TMEM198Q66K66 360 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms