RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 Q9UFV3 132 aa12.52□□□□□ -0.41
TNFRSF1A-202ENST00000366159 UTS2RQ9UKP6 389 aa12.52□□□□□ -0.41
TNFRSF1A-202ENST00000366159 ACAD8Q9UKU7 415 aa12.52□□□□□ -0.41
TNFRSF1A-202ENST00000366159 CFL2Q9Y281 166 aa12.52□□□□□ -0.41
TNFRSF1A-202ENST00000366159 DLGAP4Q9Y2H0 992 aa12.52□□□□□ -0.41
TNFRSF1A-202ENST00000366159 PLLPQ9Y342 182 aa12.52□□□□□ -0.41
TNFRSF1A-202ENST00000366159 TIMM22Q9Y584 194 aa12.52□□□□□ -0.41
TNFRSF1A-202ENST00000366159 ACOX3O15254 700 aa12.51□□□□□ -0.41
TNFRSF1A-202ENST00000366159 PCDH7O60245 1069 aa12.51□□□□□ -0.41
TNFRSF1A-202ENST00000366159 PPM1BO75688 479 aa12.51□□□□□ -0.41
TNFRSF1A-202ENST00000366159 IL3P08700 152 aa12.51□□□□□ -0.41
TNFRSF1A-202ENST00000366159 GABRA1P14867 456 aa12.51□□□□□ -0.41
TNFRSF1A-202ENST00000366159 HMOX2P30519 316 aa12.51□□□□□ -0.41
TNFRSF1A-202ENST00000366159 PPICP45877 212 aa12.51□□□□□ -0.41
TNFRSF1A-202ENST00000366159 CDK9P50750 372 aaKnown RBP12.51□□□□□ -0.41
TNFRSF1A-202ENST00000366159 DCAF7P61962 342 aa12.51□□□□□ -0.41
TNFRSF1A-202ENST00000366159 CRYZQ08257 329 aaKnown RBP12.51□□□□□ -0.41
TNFRSF1A-202ENST00000366159 SPIN4Q56A73 249 aa12.51□□□□□ -0.41
TNFRSF1A-202ENST00000366159 NHSL2Q5HYW2 709 aa12.51□□□□□ -0.41
TNFRSF1A-202ENST00000366159 C1orf185Q5T7R7 199 aa12.51□□□□□ -0.41
TNFRSF1A-202ENST00000366159 C6orf163Q5TEZ5 329 aa12.51□□□□□ -0.41
TNFRSF1A-202ENST00000366159 DESI1Q6ICB0 168 aa12.51□□□□□ -0.41
TNFRSF1A-202ENST00000366159 ZYG11AQ6WRX3 759 aa12.51□□□□□ -0.41
TNFRSF1A-202ENST00000366159 MEX3BQ6ZN04 569 aaKnown RBP12.51□□□□□ -0.41
TNFRSF1A-202ENST00000366159 NUP54Q7Z3B4 507 aa12.51□□□□□ -0.41
TNFRSF1A-202ENST00000366159 LIX1LQ8IVB5 337 aa12.51□□□□□ -0.41
TNFRSF1A-202ENST00000366159 DMRTC2Q8IXT2 367 aaPredicted RBP12.51□□□□□ -0.41
TNFRSF1A-202ENST00000366159 ULK2Q8IYT8 1036 aa12.51□□□□□ -0.41
TNFRSF1A-202ENST00000366159 OR52R1Q8NGF1 315 aa12.51□□□□□ -0.41
TNFRSF1A-202ENST00000366159 C16orf78Q8WTQ4 265 aa12.51□□□□□ -0.41
TNFRSF1A-202ENST00000366159 ERP27Q96DN0 273 aa12.51□□□□□ -0.41
TNFRSF1A-202ENST00000366159 CCDC126Q96EE4 140 aa12.51□□□□□ -0.41
TNFRSF1A-202ENST00000366159 LCORQ96JN0 433 aaPredicted RBP12.51□□□□□ -0.41
TNFRSF1A-202ENST00000366159 GNRHR2Q96P88 292 aa12.51□□□□□ -0.41
TNFRSF1A-202ENST00000366159 L2HGDHQ9H9P8 463 aa12.51□□□□□ -0.41
TNFRSF1A-202ENST00000366159 KCNJ16Q9NPI9 418 aa12.51□□□□□ -0.41
TNFRSF1A-202ENST00000366159 B4GALT7Q9UBV7 327 aa12.51□□□□□ -0.41
TNFRSF1A-202ENST00000366159 GPR55Q9Y2T6 319 aaPredicted RBP12.51□□□□□ -0.41
TNFRSF1A-202ENST00000366159 ZNF780BQ9Y6R6 833 aa12.51□□□□□ -0.41
TNFRSF1A-202ENST00000366159 FREM3P0C091 2139 aa12.51□□□□□ -0.41
TNFRSF1A-202ENST00000366159 PLIN3O60664 434 aa12.5□□□□□ -0.41
TNFRSF1A-202ENST00000366159 GLRA3O75311 464 aa12.5□□□□□ -0.41
TNFRSF1A-202ENST00000366159 PCSK2P16519 638 aa12.5□□□□□ -0.41
TNFRSF1A-202ENST00000366159 GDF1P27539 372 aa12.5□□□□□ -0.41
TNFRSF1A-202ENST00000366159 PTPN6P29350 595 aa12.5□□□□□ -0.41
TNFRSF1A-202ENST00000366159 TIA1P31483 386 aaKnown RBP eCLIP12.5□□□□□ -0.41
TNFRSF1A-202ENST00000366159 CRHR1P34998 444 aa12.5□□□□□ -0.41
TNFRSF1A-202ENST00000366159 GSTM5P46439 218 aa12.5□□□□□ -0.41
TNFRSF1A-202ENST00000366159 ZFP36L2P47974 494 aaKnown RBP12.5□□□□□ -0.41
TNFRSF1A-202ENST00000366159 ALDH9A1P49189 494 aa12.5□□□□□ -0.41
TNFRSF1A-202ENST00000366159 NAGLUP54802 743 aa12.5□□□□□ -0.41
TNFRSF1A-202ENST00000366159 DNAJB13P59910 316 aa12.5□□□□□ -0.41
TNFRSF1A-202ENST00000366159 MRPS35P82673 323 aaKnown RBP12.5□□□□□ -0.41
TNFRSF1A-202ENST00000366159 SNTA1Q13424 505 aa12.5□□□□□ -0.41
TNFRSF1A-202ENST00000366159 PRSS53Q2L4Q9 553 aa12.5□□□□□ -0.41
TNFRSF1A-202ENST00000366159 RIPPLY2Q5TAB7 128 aa12.5□□□□□ -0.41
TNFRSF1A-202ENST00000366159 TIGD3Q6B0B8 471 aa12.5□□□□□ -0.41
TNFRSF1A-202ENST00000366159 FRMD7Q6ZUT3 714 aa12.5□□□□□ -0.41
TNFRSF1A-202ENST00000366159 TRIM46Q7Z4K8 759 aa12.5□□□□□ -0.41
TNFRSF1A-202ENST00000366159 CCDC116Q8IYX3 515 aa12.5□□□□□ -0.41
TNFRSF1A-202ENST00000366159 RNF138Q8WVD3 245 aa12.5□□□□□ -0.41
TNFRSF1A-202ENST00000366159 JSRP1Q96MG2 331 aaPredicted RBP12.5□□□□□ -0.41
TNFRSF1A-202ENST00000366159 BTBD9Q96Q07 612 aa12.5□□□□□ -0.41
TNFRSF1A-202ENST00000366159 NODALQ96S42 347 aa12.5□□□□□ -0.41
TNFRSF1A-202ENST00000366159 TIMP4Q99727 224 aa12.5□□□□□ -0.41
TNFRSF1A-202ENST00000366159 PRDM14Q9GZV8 571 aa12.5□□□□□ -0.41
TNFRSF1A-202ENST00000366159 TNFRSF12AQ9NP84 129 aa12.5□□□□□ -0.41
TNFRSF1A-202ENST00000366159 MID1IP1Q9NPA3 183 aa12.5□□□□□ -0.41
TNFRSF1A-202ENST00000366159 EHD3Q9NZN3 535 aa12.5□□□□□ -0.41
TNFRSF1A-202ENST00000366159 PRODH2Q9UF12 536 aa12.5□□□□□ -0.41
TNFRSF1A-202ENST00000366159 BCAP29Q9UHQ4 241 aa12.5□□□□□ -0.41
TNFRSF1A-202ENST00000366159 C15orf41Q9Y2V0 281 aa12.5□□□□□ -0.41
TNFRSF1A-202ENST00000366159 CCL27Q9Y4X3 112 aa12.5□□□□□ -0.41
TNFRSF1A-202ENST00000366159 ARHGAP21Q5T5U3 1957 aa12.5□□□□□ -0.41
TNFRSF1A-202ENST00000366159 FRG2CA6NGY1 282 aa12.49□□□□□ -0.41
TNFRSF1A-202ENST00000366159 FAM90A27PA6NNH2 459 aa12.49□□□□□ -0.41
TNFRSF1A-202ENST00000366159 AHRRA9YTQ3 701 aa12.49□□□□□ -0.41
TNFRSF1A-202ENST00000366159 PLOD3O60568 738 aa12.49□□□□□ -0.41
TNFRSF1A-202ENST00000366159 ICOSLGO75144 302 aa12.49□□□□□ -0.41
TNFRSF1A-202ENST00000366159 CDH16O75309 829 aa12.49□□□□□ -0.41
TNFRSF1A-202ENST00000366159 UGT2B11O75310 529 aa12.49□□□□□ -0.41
TNFRSF1A-202ENST00000366159 BCAS2O75934 225 aaPredicted RBP12.49□□□□□ -0.41
TNFRSF1A-202ENST00000366159 CT45A8P0DMV1 189 aa12.49□□□□□ -0.41
TNFRSF1A-202ENST00000366159 CT45A9P0DMV2 189 aa12.49□□□□□ -0.41
TNFRSF1A-202ENST00000366159 MYL2P10916 166 aa12.49□□□□□ -0.41
TNFRSF1A-202ENST00000366159 ELAVL4P26378 380 aaKnown RBP12.49□□□□□ -0.41
TNFRSF1A-202ENST00000366159 TRPC1P48995 793 aa12.49□□□□□ -0.41
TNFRSF1A-202ENST00000366159 NAA20P61599 178 aa12.49□□□□□ -0.41
TNFRSF1A-202ENST00000366159 RPP38P78345 283 aaKnown RBP12.49□□□□□ -0.41
TNFRSF1A-202ENST00000366159 SLC18A2Q05940 514 aa12.49□□□□□ -0.41
TNFRSF1A-202ENST00000366159 ACSM2AQ08AH3 577 aa12.49□□□□□ -0.41
TNFRSF1A-202ENST00000366159 HEPACAMQ14CZ8 416 aa12.49□□□□□ -0.41
TNFRSF1A-202ENST00000366159 NNATQ16517 81 aa12.49□□□□□ -0.41
TNFRSF1A-202ENST00000366159 CCDC153Q494R4 210 aa12.49□□□□□ -0.41
TNFRSF1A-202ENST00000366159 CT45A2Q5DJT8 189 aa12.49□□□□□ -0.41
TNFRSF1A-202ENST00000366159 ACSM2BQ68CK6 577 aa12.49□□□□□ -0.41
TNFRSF1A-202ENST00000366159 VASNQ6EMK4 673 aa12.49□□□□□ -0.41
TNFRSF1A-202ENST00000366159 SLC30A6Q6NXT4 461 aa12.49□□□□□ -0.41
TNFRSF1A-202ENST00000366159 POMZP3Q6PJE2 187 aa12.49□□□□□ -0.41
TNFRSF1A-202ENST00000366159 SCIMPQ6UWF3 145 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms