RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 FGGYQ96C11 551 aa0.67□□□□□ -2.3
RNU6-238P-201ENST00000363313 PSMD1Q99460 953 aa0.67□□□□□ -2.3
RNU6-238P-201ENST00000363313 GPR174Q9BXC1 333 aa0.67□□□□□ -2.3
RNU6-238P-201ENST00000363313 ADGRL4Q9HBW9 690 aa0.67□□□□□ -2.3
RNU6-238P-201ENST00000363313 EXOSC3Q9NQT5 275 aaKnown RBP0.67□□□□□ -2.3
RNU6-238P-201ENST00000363313 GPR173Q9NS66 373 aa0.67□□□□□ -2.3
RNU6-238P-201ENST00000363313 CENPMQ9NSP4 180 aa0.67□□□□□ -2.3
RNU6-238P-201ENST00000363313 TBC1D29Q9UFV1 150 aa0.67□□□□□ -2.3
RNU6-238P-201ENST00000363313 TUBGCP4Q9UGJ1 667 aa0.67□□□□□ -2.3
RNU6-238P-201ENST00000363313 OPN4Q9UHM6 478 aa0.67□□□□□ -2.3
RNU6-238P-201ENST00000363313 TEX264Q9Y6I9 313 aa0.67□□□□□ -2.3
RNU6-238P-201ENST00000363313 CLCA3PQ9Y6N3 262 aa0.67□□□□□ -2.3
RNU6-238P-201ENST00000363313 ZNF233A6NK53 670 aa0.66□□□□□ -2.3
RNU6-238P-201ENST00000363313 PES1O00541 588 aaKnown RBP0.66□□□□□ -2.3
RNU6-238P-201ENST00000363313 PPIP5K2O43314 1243 aa0.66□□□□□ -2.3
RNU6-238P-201ENST00000363313 MRPL3P09001 348 aaKnown RBP0.66□□□□□ -2.3
RNU6-238P-201ENST00000363313 RCC1P18754 421 aaPredicted RBP0.66□□□□□ -2.3
RNU6-238P-201ENST00000363313 CAPN3P20807 821 aa0.66□□□□□ -2.3
RNU6-238P-201ENST00000363313 NNMTP40261 264 aa0.66□□□□□ -2.3
RNU6-238P-201ENST00000363313 SLC3A1Q07837 685 aa0.66□□□□□ -2.3
RNU6-238P-201ENST00000363313 HAGHQ16775 308 aa0.66□□□□□ -2.3
RNU6-238P-201ENST00000363313 SHROOM1Q2M3G4 852 aaPredicted RBP0.66□□□□□ -2.3
RNU6-238P-201ENST00000363313 SEL1L2Q5TEA6 688 aa0.66□□□□□ -2.3
RNU6-238P-201ENST00000363313 FAM180BQ6P0A1 224 aa0.66□□□□□ -2.3
RNU6-238P-201ENST00000363313 Q6ZRG5 221 aa0.66□□□□□ -2.3
RNU6-238P-201ENST00000363313 GPR142Q7Z601 462 aa0.66□□□□□ -2.3
RNU6-238P-201ENST00000363313 ZNF695Q8IW36 515 aa0.66□□□□□ -2.3
RNU6-238P-201ENST00000363313 ALLCQ8N6M5 410 aa0.66□□□□□ -2.3
RNU6-238P-201ENST00000363313 C20orf203Q8NBC4 194 aa0.66□□□□□ -2.3
RNU6-238P-201ENST00000363313 CCDC197Q8NCU1 140 aa0.66□□□□□ -2.3
RNU6-238P-201ENST00000363313 SECISBP2LQ93073 1101 aaKnown RBP0.66□□□□□ -2.3
RNU6-238P-201ENST00000363313 RMI2Q96E14 147 aa0.66□□□□□ -2.3
RNU6-238P-201ENST00000363313 SSX3Q99909 188 aa0.66□□□□□ -2.3
RNU6-238P-201ENST00000363313 SLC25A23Q9BV35 468 aa0.66□□□□□ -2.3
RNU6-238P-201ENST00000363313 KATNB1Q9BVA0 655 aa0.66□□□□□ -2.3
RNU6-238P-201ENST00000363313 TSSK1BQ9BXA7 367 aa0.66□□□□□ -2.3
RNU6-238P-201ENST00000363313 CARD9Q9H257 536 aa0.66□□□□□ -2.3
RNU6-238P-201ENST00000363313 ONECUT1Q9UBC0 465 aa0.66□□□□□ -2.3
RNU6-238P-201ENST00000363313 AFF2P51816 1311 aa0.65□□□□□ -2.3
RNU6-238P-201ENST00000363313 IQANK1A0A1B0GTG1 560 aa0.65□□□□□ -2.31
RNU6-238P-201ENST00000363313 K7ERI5 159 aa0.65□□□□□ -2.31
RNU6-238P-201ENST00000363313 SYT7O43581 403 aa0.65□□□□□ -2.31
RNU6-238P-201ENST00000363313 TRAF3IP2O43734 574 aaPredicted RBP0.65□□□□□ -2.31
RNU6-238P-201ENST00000363313 PSMD10O75832 226 aa0.65□□□□□ -2.31
RNU6-238P-201ENST00000363313 NOL4O94818 638 aa0.65□□□□□ -2.31
RNU6-238P-201ENST00000363313 CALCAP01258 141 aa0.65□□□□□ -2.31
RNU6-238P-201ENST00000363313 INSP01308 110 aa0.65□□□□□ -2.31
RNU6-238P-201ENST00000363313 CSF2P04141 144 aa0.65□□□□□ -2.31
RNU6-238P-201ENST00000363313 STSP08842 583 aa0.65□□□□□ -2.31
RNU6-238P-201ENST00000363313 WNT2P09544 360 aa0.65□□□□□ -2.31
RNU6-238P-201ENST00000363313 UGT1A5P35504 534 aa0.65□□□□□ -2.31
RNU6-238P-201ENST00000363313 CAPZA2P47755 286 aa0.65□□□□□ -2.31
RNU6-238P-201ENST00000363313 OR1C1Q15619 314 aa0.65□□□□□ -2.31
RNU6-238P-201ENST00000363313 SYPL1Q16563 259 aa0.65□□□□□ -2.31
RNU6-238P-201ENST00000363313 DCAF12Q5T6F0 453 aa0.65□□□□□ -2.31
RNU6-238P-201ENST00000363313 TXNRD3NBQ6F5E7 133 aa0.65□□□□□ -2.31
RNU6-238P-201ENST00000363313 ITIH5Q86UX2 942 aa0.65□□□□□ -2.31
RNU6-238P-201ENST00000363313 FAM219AQ8IW50 185 aa0.65□□□□□ -2.31
RNU6-238P-201ENST00000363313 ZBTB44Q8NCP5 570 aa0.65□□□□□ -2.31
RNU6-238P-201ENST00000363313 SAP25Q8TEE9 199 aa0.65□□□□□ -2.31
RNU6-238P-201ENST00000363313 DCUN1D4Q92564 292 aa0.65□□□□□ -2.31
RNU6-238P-201ENST00000363313 RAB3CQ96E17 227 aa0.65□□□□□ -2.31
RNU6-238P-201ENST00000363313 TNMDQ9H2S6 317 aa0.65□□□□□ -2.31
RNU6-238P-201ENST00000363313 PRPF19Q9UMS4 504 aaKnown RBP0.65□□□□□ -2.31
RNU6-238P-201ENST00000363313 PCDHGB4Q9UN71 923 aa0.65□□□□□ -2.31
RNU6-238P-201ENST00000363313 CARHSP1Q9Y2V2 147 aaKnown RBP0.65□□□□□ -2.31
RNU6-238P-201ENST00000363313 TMED7Q9Y3B3 224 aa0.65□□□□□ -2.31
RNU6-238P-201ENST00000363313 A0A087WV48 116 aa0.64□□□□□ -2.31
RNU6-238P-201ENST00000363313 YJEFN3A6XGL0 299 aa0.64□□□□□ -2.31
RNU6-238P-201ENST00000363313 N4BP1O75113 896 aaKnown RBP0.64□□□□□ -2.31
RNU6-238P-201ENST00000363313 LETM1O95202 739 aaPredicted RBP0.64□□□□□ -2.31
RNU6-238P-201ENST00000363313 ANKRD34CP0C6C1 535 aa0.64□□□□□ -2.31
RNU6-238P-201ENST00000363313 RNH1P13489 461 aaKnown RBP0.64□□□□□ -2.31
RNU6-238P-201ENST00000363313 PSMB4P28070 264 aa0.64□□□□□ -2.31
RNU6-238P-201ENST00000363313 VCPP55072 806 aaKnown RBP0.64□□□□□ -2.31
RNU6-238P-201ENST00000363313 FKBP1BP68106 108 aa0.64□□□□□ -2.31
RNU6-238P-201ENST00000363313 MZT1Q08AG7 82 aa0.64□□□□□ -2.31
RNU6-238P-201ENST00000363313 SPHARQ15513 63 aa0.64□□□□□ -2.31
RNU6-238P-201ENST00000363313 MEA1Q16626 185 aa0.64□□□□□ -2.31
RNU6-238P-201ENST00000363313 LBHQ53QV2 105 aaPredicted RBP0.64□□□□□ -2.31
RNU6-238P-201ENST00000363313 LGSNQ5TDP6 509 aa0.64□□□□□ -2.31
RNU6-238P-201ENST00000363313 OR5M10Q6IEU7 315 aa0.64□□□□□ -2.31
RNU6-238P-201ENST00000363313 MZT2BQ6NZ67 158 aa0.64□□□□□ -2.31
RNU6-238P-201ENST00000363313 OLFM4Q6UX06 510 aa0.64□□□□□ -2.31
RNU6-238P-201ENST00000363313 SLFN11Q7Z7L1 901 aa0.64□□□□□ -2.31
RNU6-238P-201ENST00000363313 CREBRFQ8IUR6 639 aa0.64□□□□□ -2.31
RNU6-238P-201ENST00000363313 C4orf19Q8IY42 314 aa0.64□□□□□ -2.31
RNU6-238P-201ENST00000363313 OR2AP1Q8NGE2 309 aa0.64□□□□□ -2.31
RNU6-238P-201ENST00000363313 RFESDQ8TAC1 157 aa0.64□□□□□ -2.31
RNU6-238P-201ENST00000363313 TRAF3IP1Q8TDR0 691 aaPredicted RBP0.64□□□□□ -2.31
RNU6-238P-201ENST00000363313 RDH5Q92781 318 aa0.64□□□□□ -2.31
RNU6-238P-201ENST00000363313 VPS39Q96JC1 886 aa0.64□□□□□ -2.31
RNU6-238P-201ENST00000363313 S1PR3Q99500 378 aa0.64□□□□□ -2.31
RNU6-238P-201ENST00000363313 SDF4Q9BRK5 362 aa0.64□□□□□ -2.31
RNU6-238P-201ENST00000363313 LRRC2Q9BYS8 371 aa0.64□□□□□ -2.31
RNU6-238P-201ENST00000363313 KAT8Q9H7Z6 458 aaKnown RBP0.64□□□□□ -2.31
RNU6-238P-201ENST00000363313 DCLRE1BQ9H816 532 aa0.64□□□□□ -2.31
RNU6-238P-201ENST00000363313 GDF3Q9NR23 364 aa0.64□□□□□ -2.31
RNU6-238P-201ENST00000363313 CD274Q9NZQ7 290 aa0.64□□□□□ -2.31
RNU6-238P-201ENST00000363313 SLC2A6Q9UGQ3 507 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms