RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 RNF130Q86XS8 419 aa3.06□□□□□ -1.92
RNU6-28P-201ENST00000362378 CCDC71Q8IV32 467 aaPredicted RBP3.06□□□□□ -1.92
RNU6-28P-201ENST00000362378 SAMD12Q8N8I0 201 aa3.06□□□□□ -1.92
RNU6-28P-201ENST00000362378 FADS6Q8N9I5 356 aa3.06□□□□□ -1.92
RNU6-28P-201ENST00000362378 ZNF540Q8NDQ6 660 aa3.06□□□□□ -1.92
RNU6-28P-201ENST00000362378 GMCL1P1Q8NEA9 526 aa3.06□□□□□ -1.92
RNU6-28P-201ENST00000362378 NPRL2Q8WTW4 380 aa3.06□□□□□ -1.92
RNU6-28P-201ENST00000362378 NTNG2Q96CW9 530 aa3.06□□□□□ -1.92
RNU6-28P-201ENST00000362378 HSD17B14Q9BPX1 270 aa3.06□□□□□ -1.92
RNU6-28P-201ENST00000362378 CARD6Q9BX69 1037 aa3.06□□□□□ -1.92
RNU6-28P-201ENST00000362378 LIME1Q9H400 295 aa3.06□□□□□ -1.92
RNU6-28P-201ENST00000362378 RIBC2Q9H4K1 309 aa3.06□□□□□ -1.92
RNU6-28P-201ENST00000362378 SP140LQ9H930 580 aa3.06□□□□□ -1.92
RNU6-28P-201ENST00000362378 TRPV5Q9NQA5 729 aa3.06□□□□□ -1.92
RNU6-28P-201ENST00000362378 SALL1Q9NSC2 1324 aa3.06□□□□□ -1.92
RNU6-28P-201ENST00000362378 CGNQ9P2M7 1197 aaKnown RBP3.06□□□□□ -1.92
RNU6-28P-201ENST00000362378 CTSZQ9UBR2 303 aa3.06□□□□□ -1.92
RNU6-28P-201ENST00000362378 ATP6V1HQ9UI12 483 aa3.06□□□□□ -1.92
RNU6-28P-201ENST00000362378 LAMP5Q9UJQ1 280 aa3.06□□□□□ -1.92
RNU6-28P-201ENST00000362378 FKBP7Q9Y680 259 aa3.06□□□□□ -1.92
RNU6-28P-201ENST00000362378 IGHV3OR16-10A0A075B7F0 116 aa3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 NDUFAF8A1L188 74 aa3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 NPIPA2E9PIF3 369 aa3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 PDHXO00330 501 aa3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 IMPA2O14732 288 aa3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 IDH1O75874 414 aaKnown RBP3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 SORBS2O94875 1100 aaKnown RBP3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 OR4F21O95013 312 aa3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 GOT2P00505 430 aaKnown RBP3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 HCKP08631 526 aa3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 TSPY4P0CV99 314 aa3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 TSPY10P0CW01 314 aa3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 CALCBP10092 127 aa3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 THRBP10828 461 aa3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 DPEP1P16444 411 aa3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 TNNI3P19429 210 aa3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 PAICSP22234 425 aaKnown RBP3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 MT3P25713 68 aa3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 UCP1P25874 307 aa3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 HTR2AP28223 471 aa3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 SAA4P35542 130 aa3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 SLC1A4P43007 532 aa3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 PTGFRP43088 359 aa3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 ATP4BP51164 291 aa3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 VCPP55072 806 aaKnown RBP3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 ZP4Q12836 540 aa3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 RAPSNQ13702 412 aa3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 SIX1Q15475 284 aaPredicted RBP3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 CDKN3Q16667 212 aa3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 DCAF4L1Q3SXM0 396 aa3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 DMKNQ6E0U4 476 aaPredicted RBP3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 KRTAP5-4Q6L8H1 288 aa3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 SLC25A24Q6NUK1 477 aa3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 ZNF562Q6V9R5 426 aa3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 P4HA3Q7Z4N8 544 aa3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 LHFPL4Q7Z7J7 247 aa3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 CBWD2Q8IUF1 395 aa3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 CCDC36Q8IYA8 594 aa3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 CENPLQ8N0S6 344 aaPredicted RBP3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 RAB7BQ96AH8 199 aa3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 BIRC7Q96CA5 298 aa3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 AGAP3Q96P47 875 aa3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 TESK2Q96S53 571 aa3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 ATF6BQ99941 703 aa3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 CABLES2Q9BTV7 478 aa3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 CCDC28BQ9BUN5 200 aa3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 APOOQ9BUR5 198 aa3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 ZNF416Q9BWM5 594 aa3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 TUBB1Q9H4B7 451 aa3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 RPAP3Q9H6T3 665 aaPredicted RBP3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 KAT8Q9H7Z6 458 aaKnown RBP3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 WDR76Q9H967 626 aa3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 LPAR2Q9HBW0 351 aa3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 CENPMQ9NSP4 180 aa3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 GDAP2Q9NXN4 497 aa3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 TMOD2Q9NZR1 351 aa3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 KLRF1Q9NZS2 232 aa3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 SEC14L4Q9UDX3 406 aa3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 CHMP2BQ9UQN3 213 aa3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 SLC9A8Q9Y2E8 581 aa3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 FBXO7Q9Y3I1 522 aa3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 AUP1Q9Y679 476 aa3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 TCF20Q9UGU0 1960 aaKnown RBP3.05□□□□□ -1.92
RNU6-28P-201ENST00000362378 A0A0J9YVX5 310 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 TTC26A0AVF1 554 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 LRIT2A6NDA9 550 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 A8MXK9 166 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 WASH3PC4AMC7 463 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 H0YL77 283 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 H3BMH7 237 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 H7C423 109 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 RANBP6O60518 1105 aaKnown RBP3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 MFN2O95140 757 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 IGSF6O95976 241 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 FCGR3AP08637 254 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 ANXA4P09525 319 aaPredicted RBP3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 HOXB7P09629 217 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 LMO2P25791 158 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 CALML3P27482 149 aa3.04□□□□□ -1.92
RNU6-28P-201ENST00000362378 RFC2P35250 354 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms