RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 PGDP52209 483 aa13.19□□□□□ -0.3
COL6A1-201ENST00000361866 HYAL2Q12891 473 aa13.19□□□□□ -0.3
COL6A1-201ENST00000361866 POU4F3Q15319 338 aa13.19□□□□□ -0.3
COL6A1-201ENST00000361866 VITQ6UXI7 678 aa13.19□□□□□ -0.3
COL6A1-201ENST00000361866 JAZF1Q86VZ6 243 aa13.19□□□□□ -0.3
COL6A1-201ENST00000361866 LINC00471Q8N535 108 aa13.19□□□□□ -0.3
COL6A1-201ENST00000361866 ZNF676Q8N7Q3 588 aa13.19□□□□□ -0.3
COL6A1-201ENST00000361866 SYT14Q8NB59 555 aa13.19□□□□□ -0.3
COL6A1-201ENST00000361866 MCCC1Q96RQ3 725 aaPredicted RBP13.19□□□□□ -0.3
COL6A1-201ENST00000361866 SLIRPQ9GZT3 109 aaKnown RBP13.19□□□□□ -0.3
COL6A1-201ENST00000361866 EGLN3Q9H6Z9 239 aa13.19□□□□□ -0.3
COL6A1-201ENST00000361866 ZNF3P17036 446 aa13.18□□□□□ -0.3
COL6A1-201ENST00000361866 PTPN2P17706 415 aa13.18□□□□□ -0.3
COL6A1-201ENST00000361866 MLIPQ5VWP3 458 aa13.18□□□□□ -0.3
COL6A1-201ENST00000361866 RBM45Q8IUH3 476 aaKnown RBP13.18□□□□□ -0.3
COL6A1-201ENST00000361866 TRAM1L1Q8N609 369 aa13.18□□□□□ -0.3
COL6A1-201ENST00000361866 OR8J2Q8NGG1 315 aa13.18□□□□□ -0.3
COL6A1-201ENST00000361866 SETD6Q8TBK2 473 aa13.18□□□□□ -0.3
COL6A1-201ENST00000361866 GNPDA2Q8TDQ7 276 aa13.18□□□□□ -0.3
COL6A1-201ENST00000361866 RBM18Q96H35 190 aaKnown RBP13.18□□□□□ -0.3
COL6A1-201ENST00000361866 C1QTNF7Q9BXJ2 289 aa13.18□□□□□ -0.3
COL6A1-201ENST00000361866 THSD1Q9NS62 852 aa13.18□□□□□ -0.3
COL6A1-201ENST00000361866 SIRT5Q9NXA8 310 aa13.18□□□□□ -0.3
COL6A1-201ENST00000361866 A0A1W2PQ45 241 aaPredicted RBP13.18□□□□□ -0.3
COL6A1-201ENST00000361866 A0A1W2PQY0 241 aa13.18□□□□□ -0.3
COL6A1-201ENST00000361866 TEX28O15482 410 aa13.18□□□□□ -0.3
COL6A1-201ENST00000361866 ARL6IP5O75915 188 aa13.18□□□□□ -0.3
COL6A1-201ENST00000361866 SOD2P04179 222 aa13.18□□□□□ -0.3
COL6A1-201ENST00000361866 ZNF805Q5CZA5 627 aa13.18□□□□□ -0.3
COL6A1-201ENST00000361866 MORN1Q5T089 497 aa13.18□□□□□ -0.3
COL6A1-201ENST00000361866 FTMTQ8N4E7 242 aa13.18□□□□□ -0.3
COL6A1-201ENST00000361866 PROKR2Q8NFJ6 384 aa13.18□□□□□ -0.3
COL6A1-201ENST00000361866 WBP2Q969T9 261 aa13.18□□□□□ -0.3
COL6A1-201ENST00000361866 DHRS1Q96LJ7 313 aa13.18□□□□□ -0.3
COL6A1-201ENST00000361866 DOK1Q99704 481 aa13.18□□□□□ -0.3
COL6A1-201ENST00000361866 GTPBP2Q9BX10 602 aaKnown RBP13.18□□□□□ -0.3
COL6A1-201ENST00000361866 P2RY12Q9H244 342 aa13.18□□□□□ -0.3
COL6A1-201ENST00000361866 WDR26Q9H7D7 661 aa13.18□□□□□ -0.3
COL6A1-201ENST00000361866 CNOT2Q9NZN8 540 aaKnown RBP13.18□□□□□ -0.3
COL6A1-201ENST00000361866 MAB21L2Q9Y586 359 aa13.18□□□□□ -0.3
COL6A1-201ENST00000361866 SEC16AO15027 2179 aa13.18□□□□□ -0.3
COL6A1-201ENST00000361866 GPX5O75715 221 aa13.18□□□□□ -0.3
COL6A1-201ENST00000361866 CTSEP14091 401 aa13.18□□□□□ -0.3
COL6A1-201ENST00000361866 AHCYP23526 432 aa13.18□□□□□ -0.3
COL6A1-201ENST00000361866 AHRP35869 848 aa13.18□□□□□ -0.3
COL6A1-201ENST00000361866 LRRC37A5PQ49AS3 106 aa13.18□□□□□ -0.3
COL6A1-201ENST00000361866 NDUFAF5Q5TEU4 345 aa13.18□□□□□ -0.3
COL6A1-201ENST00000361866 RSPO2Q6UXX9 243 aaPredicted RBP13.18□□□□□ -0.3
COL6A1-201ENST00000361866 MSRB3Q8IXL7 192 aa13.18□□□□□ -0.3
COL6A1-201ENST00000361866 SYNPOQ8N3V7 929 aa13.18□□□□□ -0.3
COL6A1-201ENST00000361866 CPA6Q8N4T0 437 aa13.18□□□□□ -0.3
COL6A1-201ENST00000361866 PJA1Q8NG27 643 aa13.18□□□□□ -0.3
COL6A1-201ENST00000361866 BBS10Q8TAM1 723 aa13.18□□□□□ -0.3
COL6A1-201ENST00000361866 SPACA7Q96KW9 195 aa13.18□□□□□ -0.3
COL6A1-201ENST00000361866 SAMD8Q96LT4 415 aa13.18□□□□□ -0.3
COL6A1-201ENST00000361866 DMRT3Q9NQL9 472 aa13.18□□□□□ -0.3
COL6A1-201ENST00000361866 MAU2Q9Y6X3 613 aa13.18□□□□□ -0.3
COL6A1-201ENST00000361866 PSMD9O00233 223 aa13.18□□□□□ -0.3
COL6A1-201ENST00000361866 RCBTB2O95199 551 aa13.18□□□□□ -0.3
COL6A1-201ENST00000361866 TGM1P22735 817 aa13.18□□□□□ -0.3
COL6A1-201ENST00000361866 PRMT2P55345 433 aa13.18□□□□□ -0.3
COL6A1-201ENST00000361866 PSMA6P60900 246 aaKnown RBP13.18□□□□□ -0.3
COL6A1-201ENST00000361866 RPS25P62851 125 aaKnown RBP13.18□□□□□ -0.3
COL6A1-201ENST00000361866 NNATQ16517 81 aa13.18□□□□□ -0.3
COL6A1-201ENST00000361866 CCSAPQ6IQ19 270 aaPredicted RBP13.18□□□□□ -0.3
COL6A1-201ENST00000361866 CBARPQ8N350 705 aaPredicted RBP13.18□□□□□ -0.3
COL6A1-201ENST00000361866 NUP43Q8NFH3 380 aa13.18□□□□□ -0.3
COL6A1-201ENST00000361866 OR52E4Q8NGH9 312 aa13.18□□□□□ -0.3
COL6A1-201ENST00000361866 CEP76Q8TAP6 659 aa13.18□□□□□ -0.3
COL6A1-201ENST00000361866 ZNF689Q96CS4 500 aaPredicted RBP13.18□□□□□ -0.3
COL6A1-201ENST00000361866 SAP130Q9H0E3 1048 aa13.18□□□□□ -0.3
COL6A1-201ENST00000361866 SLA2Q9H6Q3 261 aa13.18□□□□□ -0.3
COL6A1-201ENST00000361866 ELL3Q9HB65 397 aaPredicted RBP13.18□□□□□ -0.3
COL6A1-201ENST00000361866 MED31Q9Y3C7 131 aa13.18□□□□□ -0.3
COL6A1-201ENST00000361866 STON1Q9Y6Q2 735 aa13.18□□□□□ -0.3
COL6A1-201ENST00000361866 LAMB2P55268 1798 aa13.17□□□□□ -0.3
COL6A1-201ENST00000361866 A0A1W2PRQ8 180 aa13.17□□□□□ -0.3
COL6A1-201ENST00000361866 CTBP2P56545 445 aa13.17□□□□□ -0.3
COL6A1-201ENST00000361866 SLC38A5Q8WUX1 472 aa13.17□□□□□ -0.3
COL6A1-201ENST00000361866 SPRYD4Q8WW59 207 aaPredicted RBP13.17□□□□□ -0.3
COL6A1-201ENST00000361866 YIPF6Q96EC8 236 aa13.17□□□□□ -0.3
COL6A1-201ENST00000361866 SGIP1Q9BQI5 828 aa13.17□□□□□ -0.3
COL6A1-201ENST00000361866 OR10A4Q9H209 315 aa13.17□□□□□ -0.3
COL6A1-201ENST00000361866 TXNL4BQ9NX01 149 aaKnown RBP13.17□□□□□ -0.3
COL6A1-201ENST00000361866 SOHLH2Q9NX45 425 aa13.17□□□□□ -0.3
COL6A1-201ENST00000361866 NOX1Q9Y5S8 564 aa13.17□□□□□ -0.3
COL6A1-201ENST00000361866 ALPK2Q86TB3 2170 aa13.17□□□□□ -0.3
COL6A1-201ENST00000361866 PHIPQ8WWQ0 1821 aa13.17□□□□□ -0.3
COL6A1-201ENST00000361866 TMEM202A6NGA9 273 aa13.17□□□□□ -0.3
COL6A1-201ENST00000361866 LRRN3E7EW58 273 aa13.17□□□□□ -0.3
COL6A1-201ENST00000361866 ARHGEF15O94989 841 aa13.17□□□□□ -0.3
COL6A1-201ENST00000361866 HMGN2P05204 90 aaKnown RBP13.17□□□□□ -0.3
COL6A1-201ENST00000361866 HOXD8P13378 290 aaPredicted RBP13.17□□□□□ -0.3
COL6A1-201ENST00000361866 ACTR1BP42025 376 aa13.17□□□□□ -0.3
COL6A1-201ENST00000361866 ACTR1AP61163 376 aa13.17□□□□□ -0.3
COL6A1-201ENST00000361866 WDR5P61964 334 aaKnown RBP13.17□□□□□ -0.3
COL6A1-201ENST00000361866 LRIF1Q5T3J3 769 aa13.17□□□□□ -0.3
COL6A1-201ENST00000361866 AFMIDQ63HM1 303 aa13.17□□□□□ -0.3
COL6A1-201ENST00000361866 WASH2PQ6VEQ5 465 aa13.17□□□□□ -0.3
COL6A1-201ENST00000361866 ZNF782Q6ZMW2 699 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms