RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 ERVK-19Q9WJR5 959 aa17.62■□□□□ 0.41
CLIP2-202ENST00000361545 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.62■□□□□ 0.41
CLIP2-202ENST00000361545 ANTXRLA6NF34 631 aa17.62■□□□□ 0.41
CLIP2-202ENST00000361545 A6NLC8 198 aa17.62■□□□□ 0.41
CLIP2-202ENST00000361545 BRINP1O60477 761 aa17.62■□□□□ 0.41
CLIP2-202ENST00000361545 C1orf105O95561 183 aa17.62■□□□□ 0.41
CLIP2-202ENST00000361545 PRLP01236 227 aa17.62■□□□□ 0.41
CLIP2-202ENST00000361545 ATXN1LP0C7T5 689 aaKnown RBP17.62■□□□□ 0.41
CLIP2-202ENST00000361545 GGT2P36268 569 aa17.62■□□□□ 0.41
CLIP2-202ENST00000361545 CRISP1P54107 249 aa17.62■□□□□ 0.41
CLIP2-202ENST00000361545 MLF2Q15773 248 aaPredicted RBP17.62■□□□□ 0.41
CLIP2-202ENST00000361545 ARSJQ5FYB0 599 aaPredicted RBP17.62■□□□□ 0.41
CLIP2-202ENST00000361545 OR52E2Q8NGJ4 325 aa17.62■□□□□ 0.41
CLIP2-202ENST00000361545 GAL3ST3Q96A11 431 aa17.62■□□□□ 0.41
CLIP2-202ENST00000361545 PGAM5Q96HS1 289 aa17.62■□□□□ 0.41
CLIP2-202ENST00000361545 TMEM168Q9H0V1 697 aa17.62■□□□□ 0.41
CLIP2-202ENST00000361545 VDAC3Q9Y277 283 aa17.62■□□□□ 0.41
CLIP2-202ENST00000361545 RLN2P04090 185 aa17.62■□□□□ 0.41
CLIP2-202ENST00000361545 S100A9P06702 114 aaKnown RBP17.62■□□□□ 0.41
CLIP2-202ENST00000361545 GNG2P59768 71 aa17.62■□□□□ 0.41
CLIP2-202ENST00000361545 RGNQ15493 299 aa17.62■□□□□ 0.41
CLIP2-202ENST00000361545 FAM189A2Q15884 450 aa17.62■□□□□ 0.41
CLIP2-202ENST00000361545 NRMQ8IXM6 262 aa17.62■□□□□ 0.41
CLIP2-202ENST00000361545 OR4K13Q8NH42 304 aa17.62■□□□□ 0.41
CLIP2-202ENST00000361545 CCNL2Q96S94 520 aaPredicted RBP17.62■□□□□ 0.41
CLIP2-202ENST00000361545 CLEC4EQ9ULY5 219 aa17.62■□□□□ 0.41
CLIP2-202ENST00000361545 FLRT2O43155 660 aa17.61■□□□□ 0.41
CLIP2-202ENST00000361545 VAMP1P23763 118 aa17.61■□□□□ 0.41
CLIP2-202ENST00000361545 AP2S1P53680 142 aaPredicted RBP17.61■□□□□ 0.41
CLIP2-202ENST00000361545 GALNT1Q10472 559 aaPredicted RBP17.61■□□□□ 0.41
CLIP2-202ENST00000361545 FOXRED2Q8IWF2 684 aa17.61■□□□□ 0.41
CLIP2-202ENST00000361545 TDHQ8IZJ6 230 aa17.61■□□□□ 0.41
CLIP2-202ENST00000361545 ZNF565Q8N9K5 539 aa17.61■□□□□ 0.41
CLIP2-202ENST00000361545 NAT6Q93015 286 aa17.61■□□□□ 0.41
CLIP2-202ENST00000361545 BORCS8Q96FH0 119 aa17.61■□□□□ 0.41
CLIP2-202ENST00000361545 INSM2Q96T92 566 aaPredicted RBP17.61■□□□□ 0.41
CLIP2-202ENST00000361545 SRPK3Q9UPE1 567 aa17.61■□□□□ 0.41
CLIP2-202ENST00000361545 NPIPA5A0A0B4J1W7 369 aa17.61■□□□□ 0.41
CLIP2-202ENST00000361545 NPIPA7E9PJI5 369 aa17.61■□□□□ 0.41
CLIP2-202ENST00000361545 PPP6CO00743 305 aa17.61■□□□□ 0.41
CLIP2-202ENST00000361545 ABLIM3O94929 683 aa17.61■□□□□ 0.41
CLIP2-202ENST00000361545 NPIPA8P0DM63 369 aa17.61■□□□□ 0.41
CLIP2-202ENST00000361545 CAPN3P20807 821 aa17.61■□□□□ 0.41
CLIP2-202ENST00000361545 PYCR1P32322 319 aa17.61■□□□□ 0.41
CLIP2-202ENST00000361545 CTSL3PQ5NE16 218 aa17.61■□□□□ 0.41
CLIP2-202ENST00000361545 SLC45A3Q96JT2 553 aa17.61■□□□□ 0.41
CLIP2-202ENST00000361545 PITX2Q99697 317 aa17.61■□□□□ 0.41
CLIP2-202ENST00000361545 HOXD1Q9GZZ0 328 aa17.61■□□□□ 0.41
CLIP2-202ENST00000361545 CUEDC1Q9NWM3 386 aaPredicted RBP17.61■□□□□ 0.41
CLIP2-202ENST00000361545 DDCP20711 480 aa17.61■□□□□ 0.41
CLIP2-202ENST00000361545 AOAHP28039 575 aa17.61■□□□□ 0.41
CLIP2-202ENST00000361545 ANKDD1AQ495B1 522 aa17.61■□□□□ 0.41
CLIP2-202ENST00000361545 LIPKQ5VXJ0 399 aa17.61■□□□□ 0.41
CLIP2-202ENST00000361545 PARM1Q6UWI2 310 aa17.61■□□□□ 0.41
CLIP2-202ENST00000361545 ZNF615Q8N8J6 731 aa17.61■□□□□ 0.41
CLIP2-202ENST00000361545 CDRT4Q8N9R6 151 aa17.61■□□□□ 0.41
CLIP2-202ENST00000361545 CEP76Q8TAP6 659 aa17.61■□□□□ 0.41
CLIP2-202ENST00000361545 DMRTB1Q96MA1 342 aa17.61■□□□□ 0.41
CLIP2-202ENST00000361545 METTL8Q9H825 291 aaKnown RBP17.61■□□□□ 0.41
CLIP2-202ENST00000361545 SLC39A1Q9NY26 324 aa17.61■□□□□ 0.41
CLIP2-202ENST00000361545 CDH10Q9Y6N8 788 aa17.61■□□□□ 0.41
CLIP2-202ENST00000361545 AQP9O43315 295 aa17.61■□□□□ 0.41
CLIP2-202ENST00000361545 NUAK1O60285 661 aa17.61■□□□□ 0.41
CLIP2-202ENST00000361545 MAZP56270 477 aaKnown RBP17.61■□□□□ 0.41
CLIP2-202ENST00000361545 ARG2P78540 354 aa17.61■□□□□ 0.41
CLIP2-202ENST00000361545 RPE65Q16518 533 aa17.61■□□□□ 0.41
CLIP2-202ENST00000361545 CDKL4Q5MAI5 379 aa17.61■□□□□ 0.41
CLIP2-202ENST00000361545 MAMDC2Q7Z304 686 aaPredicted RBP17.61■□□□□ 0.41
CLIP2-202ENST00000361545 ARNT2Q9HBZ2 717 aa17.61■□□□□ 0.41
CLIP2-202ENST00000361545 MEMO1Q9Y316 297 aa17.61■□□□□ 0.41
CLIP2-202ENST00000361545 ABCB7O75027 752 aa17.6■□□□□ 0.41
CLIP2-202ENST00000361545 ECH1Q13011 328 aa17.6■□□□□ 0.41
CLIP2-202ENST00000361545 ANKRD33Q7Z3H0 272 aa17.6■□□□□ 0.41
CLIP2-202ENST00000361545 TMED4Q7Z7H5 227 aa17.6■□□□□ 0.41
CLIP2-202ENST00000361545 PGBD5Q8N414 524 aa17.6■□□□□ 0.41
CLIP2-202ENST00000361545 TEX26Q8N6G2 289 aa17.6■□□□□ 0.41
CLIP2-202ENST00000361545 OR5D16Q8NGK9 328 aa17.6■□□□□ 0.41
CLIP2-202ENST00000361545 RTP3Q9BQQ7 232 aa17.6■□□□□ 0.41
CLIP2-202ENST00000361545 FBXO9Q9UK97 447 aaPredicted RBP17.6■□□□□ 0.41
CLIP2-202ENST00000361545 PRH1P02810 166 aa17.6■□□□□ 0.41
CLIP2-202ENST00000361545 SDC1P18827 310 aa17.6■□□□□ 0.41
CLIP2-202ENST00000361545 ADH7P40394 386 aa17.6■□□□□ 0.41
CLIP2-202ENST00000361545 ERV3-1Q14264 604 aa17.6■□□□□ 0.41
CLIP2-202ENST00000361545 ARHGAP19Q14CB8 494 aa17.6■□□□□ 0.41
CLIP2-202ENST00000361545 WSCD2Q2TBF2 565 aa17.6■□□□□ 0.41
CLIP2-202ENST00000361545 ZNF773Q6PK81 442 aa17.6■□□□□ 0.41
CLIP2-202ENST00000361545 PAQR7Q86WK9 346 aa17.6■□□□□ 0.41
CLIP2-202ENST00000361545 DDIT4LQ96D03 193 aa17.6■□□□□ 0.41
CLIP2-202ENST00000361545 SLC41A3Q96GZ6 507 aa17.6■□□□□ 0.41
CLIP2-202ENST00000361545 LRR1Q96L50 414 aa17.6■□□□□ 0.41
CLIP2-202ENST00000361545 SMURF1Q9HCE7 757 aa17.6■□□□□ 0.41
CLIP2-202ENST00000361545 TIAM2Q8IVF5 1701 aa17.6■□□□□ 0.41
CLIP2-202ENST00000361545 M0R3H8 397 aa17.6■□□□□ 0.41
CLIP2-202ENST00000361545 HMGB3O15347 200 aaKnown RBP17.6■□□□□ 0.41
CLIP2-202ENST00000361545 FMO6PO60774 539 aa17.6■□□□□ 0.41
CLIP2-202ENST00000361545 GGT1P19440 569 aa17.6■□□□□ 0.41
CLIP2-202ENST00000361545 DNASE1L3Q13609 305 aa17.6■□□□□ 0.41
CLIP2-202ENST00000361545 PPP1R3BQ86XI6 285 aa17.6■□□□□ 0.41
CLIP2-202ENST00000361545 RNF175Q8N4F7 328 aa17.6■□□□□ 0.41
CLIP2-202ENST00000361545 HORMAD2Q8N7B1 307 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms