RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 CILPO75339 1184 aa12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 PITPNBP48739 271 aa12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 RPS15P62841 145 aaKnown RBP12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 LPPQ93052 612 aa12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 PCDHGC4Q9Y5F7 938 aa12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 KHNYNO15037 678 aaKnown RBP12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 HK3P52790 923 aa12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 HOXD1Q9GZZ0 328 aa12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 hCG_1809904A0A1W2PP81 198 aa12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 A0A1W2PPE2 198 aa12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 A0A1W2PR64 198 aa12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 A0A1W2PRV1 198 aa12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 MAGEB4O15481 346 aaPredicted RBP12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 DLX3O60479 287 aa12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 CNTN5O94779 1100 aa12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 C8AP07357 584 aa12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 PFKMP08237 780 aa12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 SPATA31D3P0C874 917 aa12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 CD53P19397 219 aa12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 SSTR2P30874 369 aa12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 CA5AP35218 305 aa12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 TGFBR3Q03167 851 aa12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 FLYWCH1Q4VC44 716 aa12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 SPATA31D4Q6ZUB0 917 aa12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 NRROSQ86YC3 692 aa12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 OR4D6Q8NGJ1 314 aa12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 SORCS1Q8WY21 1168 aa12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 FBXL12Q9NXK8 326 aa12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 FZD10Q9ULW2 581 aa12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 PCDHAC2Q9Y5I4 1007 aa12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 A6NHS1 94 aa12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 SOX1O00570 391 aaPredicted RBP12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 UBBP0CG47 229 aa12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 UBCP0CG48 685 aaKnown RBP12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 CDKN1CP49918 316 aaPredicted RBP12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 KCNJ8Q15842 424 aa12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 CYP27C1Q4G0S4 372 aa12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 DCAF12L1Q5VU92 463 aa12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 KCNIP4Q6PIL6 250 aa12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 ZDHHC14Q8IZN3 488 aa12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 CACNG2Q9Y698 323 aa12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 FAM159BA6NKW6 160 aa12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 AKR1C2P52895 323 aa12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 ITPRIPL2Q3MIP1 535 aa12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 ARHGAP11AQ6P4F7 1023 aa12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 TXNDC15Q96J42 360 aa12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 TTYH3Q9C0H2 523 aa12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 HRH4Q9H3N8 390 aa12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 UBIAD1Q9Y5Z9 338 aa12.63□□□□□ -0.39
SRGAP3-201ENST00000360413 CPED1A4D0V7 1026 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 KRBOX1C9JBD0 128 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 ETFAP13804 333 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 PKDCCQ504Y2 493 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 VARS2Q5ST30 1063 aaKnown RBP12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 MAP1SQ66K74 1059 aaPredicted RBP12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 ZNF610Q8N9Z0 462 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 OR4K14Q8NGD5 310 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 SUV39H2Q9H5I1 410 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 DDTLA6NHG4 134 aaPredicted RBP12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 CBY3A6NI87 242 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 CDCA2Q69YH5 1023 aaPredicted RBP12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 IQCF1Q8N6M8 205 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 OR9A2Q8NGT5 310 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 IL31RAQ8NI17 732 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 SLC22A14Q9Y267 594 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 LSM5Q9Y4Y9 91 aaKnown RBP12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 TRBV23OR9-2A0A075B6M9 112 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 DUX1O43812 170 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 HEXAP06865 529 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 DDCP20711 480 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 GALNT1Q10472 559 aaPredicted RBP12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 NPRL3Q12980 569 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 STK11Q15831 433 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 PRSS48Q7RTY5 328 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 DNAJC22Q8N4W6 341 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 C1orf52Q8N6N3 182 aaKnown RBP12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 OR2AP1Q8NGE2 309 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 OR5L1Q8NGL2 311 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 SLAMF9Q96A28 289 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 SEMA6CQ9H3T2 930 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 A0A0G2JN53 185 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 MEGF11A6BM72 1044 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 OR5H15A6NDH6 313 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 OR5H14A6NHG9 310 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 OR5H1A6NKK0 313 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 STK19P49842 368 aaPredicted RBP12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 RBPJQ06330 500 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 RCAN2Q14206 197 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 PCGF3Q3KNV8 242 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 PAN3Q58A45 887 aaKnown RBP12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 SPANXN4Q5MJ08 99 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 FAM199XQ6PEV8 388 aaPredicted RBP12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 CNIH2Q6PI25 160 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 TTLL10Q6ZVT0 673 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 OR6N2Q8NGY6 317 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 OR51E2Q9H255 320 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 GPR83Q9NYM4 423 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 SIX4Q9UIU6 781 aa12.62□□□□□ -0.39
SRGAP3-201ENST00000360413 COPS3Q9UNS2 423 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms