RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 CSNK2A1P68400 391 aaPredicted RBP8.89□□□□□ -0.99
VPS13A-203ENST00000360280 SCAPQ12770 1279 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 C9orf131Q5VYM1 1079 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 CSNK2A3Q8NEV1 391 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 OR4D6Q8NGJ1 314 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 OR4Q3Q8NH05 313 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 CDCA5Q96FF9 252 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 FAM159BA6NKW6 160 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 GPR137BO60478 399 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 HLA-HP01893 362 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 IL17AQ16552 155 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 HACD4Q5VWC8 232 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 B3GLCTQ6Y288 498 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 OR56B4Q8NH76 319 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 MAP2K4P45985 399 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 NFATC3Q12968 1075 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 GRIN2CQ14957 1233 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 TSGA13Q96PP4 275 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 KCNH6Q9H252 994 aa8.89□□□□□ -0.99
VPS13A-203ENST00000360280 JRKO75564 520 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 FOXN2P32314 431 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 DAOAP59103 153 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 CYP27C1Q4G0S4 372 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 LRRC73Q5JTD7 316 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 C6orf141Q5SZD1 244 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 CATSPERGQ6ZRH7 1159 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 ZBTB20Q9HC78 741 aaPredicted RBP8.88□□□□□ -0.99
VPS13A-203ENST00000360280 A6NLC8 198 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 NPC1O15118 1278 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 CSTAP01040 98 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 HLA-DQB2P05538 268 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 NKX2-5P52952 324 aaPredicted RBP8.88□□□□□ -0.99
VPS13A-203ENST00000360280 TXNDC15Q96J42 360 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 LRR1Q96L50 414 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 RPS10-NUDT3A0A1W2PQS6 291 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 RPS10P46783 165 aaKnown RBP8.88□□□□□ -0.99
VPS13A-203ENST00000360280 MZT1Q08AG7 82 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 MSMO1Q15800 293 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 UBE2NLQ5JXB2 153 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 OR2T4Q8NH00 348 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 PITX2Q99697 317 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 PCDHB3Q9Y5E6 796 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 HOXD12P35452 270 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 SPANXN4Q5MJ08 99 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 KIAA0907Q7Z7F0 614 aaPredicted RBP8.88□□□□□ -0.99
VPS13A-203ENST00000360280 DDIT4LQ96D03 193 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 TMEM248Q9NWD8 314 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 SCML2Q9UQR0 700 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 TEX264Q9Y6I9 313 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 SERPINE2P07093 398 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 VGLL4Q14135 290 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 SLC10A1Q14973 349 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 NAPRTQ6XQN6 538 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 LRCH3Q96II8 777 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 BMFQ96LC9 184 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 NAA10P41227 235 aaPredicted RBP8.88□□□□□ -0.99
VPS13A-203ENST00000360280 WASP42768 502 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 TLE4Q04727 773 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 USP50Q70EL3 339 aaPredicted RBP8.88□□□□□ -0.99
VPS13A-203ENST00000360280 VPS25Q9BRG1 176 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 SLC38A1Q9H2H9 487 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 VSTM2BA6NLU5 285 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 MRPS14O60783 128 aaKnown RBP8.88□□□□□ -0.99
VPS13A-203ENST00000360280 ZDHHC11BP0C7U3 371 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 SF3A2Q15428 464 aaKnown RBP8.88□□□□□ -0.99
VPS13A-203ENST00000360280 RNF151Q2KHN1 245 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 SNX27Q96L92 541 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 LRP5LA4QPB2 252 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 IMPA1P29218 277 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 HMGB4Q8WW32 186 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 OCSTAMPQ9BR26 566 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 MYOM1P52179 1685 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 ANKRD36CQ5JPF3 1778 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 RNF212BA8MTL3 300 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 C6orf47O95873 294 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 PTPN2P17706 415 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 CHRNB4P30926 498 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 MLLT10P55197 1068 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 GBX1Q14549 363 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 UPP1Q16831 310 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 OR9A4Q8NGU2 314 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 PELOQ9BRX2 385 aaKnown RBP8.88□□□□□ -0.99
VPS13A-203ENST00000360280 GON7Q9BXV9 100 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 ZDHHC18Q9NUE0 388 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 PCDHGA7Q9Y5G6 932 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 A0A1W2PPK0 400 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 J3KR12 359 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 ACP5P13686 325 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 SP3Q02447 781 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 ARNTL2Q8WYA1 636 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 RELTQ969Z4 430 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 RPL10LQ96L21 214 aaKnown RBP8.88□□□□□ -0.99
VPS13A-203ENST00000360280 TESQ9UGI8 421 aaKnown RBP8.88□□□□□ -0.99
VPS13A-203ENST00000360280 TPPPO94811 219 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 GDF10P55107 478 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 TEX26Q8N6G2 289 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 OR10Q1Q8NGQ4 319 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 OR51Q1Q8NH59 317 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 SLC2A12Q8TD20 617 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 AKT1S1Q96B36 256 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms