RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 POGLUT1Q8NBL1 392 aa16.7■□□□□ 0.26
RTN4-204ENST00000357732 ZNF485Q8NCK3 441 aa16.7■□□□□ 0.26
RTN4-204ENST00000357732 JPH3Q8WXH2 748 aaPredicted RBP16.7■□□□□ 0.26
RTN4-204ENST00000357732 NUS1Q96E22 293 aa16.7■□□□□ 0.26
RTN4-204ENST00000357732 FYTTD1Q96QD9 318 aaKnown RBP16.7■□□□□ 0.26
RTN4-204ENST00000357732 PINK1Q9BXM7 581 aa16.7■□□□□ 0.26
RTN4-204ENST00000357732 TEX12Q9BXU0 123 aa16.7■□□□□ 0.26
RTN4-204ENST00000357732 OR51I1Q9H343 314 aa16.7■□□□□ 0.26
RTN4-204ENST00000357732 SERHL2Q9H4I8 314 aa16.7■□□□□ 0.26
RTN4-204ENST00000357732 ASF1AQ9Y294 204 aa16.7■□□□□ 0.26
RTN4-204ENST00000357732 LINC00854A0A1B0GVQ3 168 aa16.7■□□□□ 0.26
RTN4-204ENST00000357732 SYT5O00445 386 aa16.7■□□□□ 0.26
RTN4-204ENST00000357732 CCL16O15467 120 aa16.7■□□□□ 0.26
RTN4-204ENST00000357732 IL12RB1P42701 662 aa16.7■□□□□ 0.26
RTN4-204ENST00000357732 GZMKP49863 264 aa16.7■□□□□ 0.26
RTN4-204ENST00000357732 CCR8P51685 355 aa16.7■□□□□ 0.26
RTN4-204ENST00000357732 CAMK2BQ13554 666 aa16.7■□□□□ 0.26
RTN4-204ENST00000357732 SYPL1Q16563 259 aa16.7■□□□□ 0.26
RTN4-204ENST00000357732 SFXN5Q8TD22 340 aa16.7■□□□□ 0.26
RTN4-204ENST00000357732 TMEM203Q969S6 136 aa16.7■□□□□ 0.26
RTN4-204ENST00000357732 LINC00597Q9H2U6 94 aa16.7■□□□□ 0.26
RTN4-204ENST00000357732 DDX31Q9H8H2 851 aaKnown RBP16.7■□□□□ 0.26
RTN4-204ENST00000357732 MED17Q9NVC6 651 aa16.7■□□□□ 0.26
RTN4-204ENST00000357732 ING3Q9NXR8 418 aa16.7■□□□□ 0.26
RTN4-204ENST00000357732 NDRG2Q9UN36 371 aaKnown RBP16.7■□□□□ 0.26
RTN4-204ENST00000357732 A0A0G2JPF8 293 aa16.69■□□□□ 0.26
RTN4-204ENST00000357732 HNRNPCL2B2RXH8 293 aa16.69■□□□□ 0.26
RTN4-204ENST00000357732 HNRNPCL3B7ZW38 293 aa16.69■□□□□ 0.26
RTN4-204ENST00000357732 CASKO14936 926 aa16.69■□□□□ 0.26
RTN4-204ENST00000357732 AKAP8O43823 692 aaKnown RBP16.69■□□□□ 0.26
RTN4-204ENST00000357732 SLC19A2O60779 497 aa16.69■□□□□ 0.26
RTN4-204ENST00000357732 SLC43A1O75387 559 aa16.69■□□□□ 0.26
RTN4-204ENST00000357732 UBXN7O94888 489 aa16.69■□□□□ 0.26
RTN4-204ENST00000357732 GNRH1P01148 92 aa16.69■□□□□ 0.26
RTN4-204ENST00000357732 PRNPP04156 253 aa16.69■□□□□ 0.26
RTN4-204ENST00000357732 HNRNPCL4P0DMR1 293 aa16.69■□□□□ 0.26
RTN4-204ENST00000357732 OR12D1P0DN82 309 aa16.69■□□□□ 0.26
RTN4-204ENST00000357732 GPR1P46091 355 aa16.69■□□□□ 0.26
RTN4-204ENST00000357732 CLDN20P56880 219 aa16.69■□□□□ 0.26
RTN4-204ENST00000357732 C19orf57Q0VDD7 668 aa16.69■□□□□ 0.26
RTN4-204ENST00000357732 TSPAN31Q12999 210 aa16.69■□□□□ 0.26
RTN4-204ENST00000357732 DSG2Q14126 1118 aa16.69■□□□□ 0.26
RTN4-204ENST00000357732 SF3A2Q15428 464 aaKnown RBP16.69■□□□□ 0.26
RTN4-204ENST00000357732 TATDN3Q17R31 274 aa16.69■□□□□ 0.26
RTN4-204ENST00000357732 RASSF6Q6ZTQ3 369 aa16.69■□□□□ 0.26
RTN4-204ENST00000357732 ZNF547Q8IVP9 402 aa16.69■□□□□ 0.26
RTN4-204ENST00000357732 ANKK1Q8NFD2 765 aa16.69■□□□□ 0.26
RTN4-204ENST00000357732 UBASH3BQ8TF42 649 aa16.69■□□□□ 0.26
RTN4-204ENST00000357732 ACOT12Q8WYK0 555 aa16.69■□□□□ 0.26
RTN4-204ENST00000357732 TTC9Q92623 222 aa16.69■□□□□ 0.26
RTN4-204ENST00000357732 MOAP1Q96BY2 351 aa16.69■□□□□ 0.26
RTN4-204ENST00000357732 TCEAL4Q96EI5 215 aa16.69■□□□□ 0.26
RTN4-204ENST00000357732 F2RL3Q96RI0 385 aa16.69■□□□□ 0.26
RTN4-204ENST00000357732 KCNJ15Q99712 375 aa16.69■□□□□ 0.26
RTN4-204ENST00000357732 JAM3Q9BX67 310 aa16.69■□□□□ 0.26
RTN4-204ENST00000357732 BTBD1Q9H0C5 482 aa16.69■□□□□ 0.26
RTN4-204ENST00000357732 TDP1Q9NUW8 608 aa16.69■□□□□ 0.26
RTN4-204ENST00000357732 ASB6Q9NWX5 421 aa16.69■□□□□ 0.26
RTN4-204ENST00000357732 PRKAG2Q9UGJ0 569 aa16.69■□□□□ 0.26
RTN4-204ENST00000357732 M0R3H8 397 aa16.69■□□□□ 0.26
RTN4-204ENST00000357732 LIMS3P0CW19 117 aa16.69■□□□□ 0.26
RTN4-204ENST00000357732 LIMS4P0CW20 117 aa16.69■□□□□ 0.26
RTN4-204ENST00000357732 EVX1P49640 407 aa16.69■□□□□ 0.26
RTN4-204ENST00000357732 FABP5Q01469 135 aa16.69■□□□□ 0.26
RTN4-204ENST00000357732 TLE2Q04725 743 aa16.69■□□□□ 0.26
RTN4-204ENST00000357732 LY6G5CQ5SRR4 150 aa16.69■□□□□ 0.26
RTN4-204ENST00000357732 CNIH2Q6PI25 160 aa16.69■□□□□ 0.26
RTN4-204ENST00000357732 ANKRD53Q8N9V6 530 aa16.69■□□□□ 0.26
RTN4-204ENST00000357732 EXOSC8Q96B26 276 aaKnown RBP16.69■□□□□ 0.26
RTN4-204ENST00000357732 ZFYVE19Q96K21 471 aa16.69■□□□□ 0.26
RTN4-204ENST00000357732 DEFB118Q96PH6 123 aa16.69■□□□□ 0.26
RTN4-204ENST00000357732 MARVELD1Q9BSK0 173 aa16.69■□□□□ 0.26
RTN4-204ENST00000357732 TMEM43Q9BTV4 400 aa16.69■□□□□ 0.26
RTN4-204ENST00000357732 GTPBP2Q9BX10 602 aaKnown RBP16.69■□□□□ 0.26
RTN4-204ENST00000357732 ZBP1Q9H171 429 aa16.69■□□□□ 0.26
RTN4-204ENST00000357732 GIMAP4Q9NUV9 329 aa16.69■□□□□ 0.26
RTN4-204ENST00000357732 LAMA3Q16787 3333 aa16.68■□□□□ 0.26
RTN4-204ENST00000357732 PRAMEF27A3QJZ7 478 aa16.68■□□□□ 0.26
RTN4-204ENST00000357732 NDUFS4O43181 175 aa16.68■□□□□ 0.26
RTN4-204ENST00000357732 ORC5O43913 435 aa16.68■□□□□ 0.26
RTN4-204ENST00000357732 FAM157BP0CG42 384 aa16.68■□□□□ 0.26
RTN4-204ENST00000357732 CD83Q01151 205 aa16.68■□□□□ 0.26
RTN4-204ENST00000357732 GALK2Q01415 458 aa16.68■□□□□ 0.26
RTN4-204ENST00000357732 OR2G6Q5TZ20 316 aa16.68■□□□□ 0.26
RTN4-204ENST00000357732 RAET1GQ6H3X3 334 aa16.68■□□□□ 0.26
RTN4-204ENST00000357732 ARIH2OSQ8N7S6 290 aa16.68■□□□□ 0.26
RTN4-204ENST00000357732 OR52N1Q8NH53 320 aa16.68■□□□□ 0.26
RTN4-204ENST00000357732 WFIKKN2Q8TEU8 576 aa16.68■□□□□ 0.26
RTN4-204ENST00000357732 XAGE5Q8WWM1 108 aa16.68■□□□□ 0.26
RTN4-204ENST00000357732 GATAD2BQ8WXI9 593 aa16.68■□□□□ 0.26
RTN4-204ENST00000357732 CAPNS2Q96L46 248 aa16.68■□□□□ 0.26
RTN4-204ENST00000357732 WFDC6Q9BQY6 131 aa16.68■□□□□ 0.26
RTN4-204ENST00000357732 SAP130Q9H0E3 1048 aa16.68■□□□□ 0.26
RTN4-204ENST00000357732 PLSCR3Q9NRY6 295 aa16.68■□□□□ 0.26
RTN4-204ENST00000357732 CARD8Q9Y2G2 431 aa16.68■□□□□ 0.26
RTN4-204ENST00000357732 OR6C70A6NIJ9 312 aa16.67■□□□□ 0.26
RTN4-204ENST00000357732 NOTOA8MTQ0 251 aa16.67■□□□□ 0.26
RTN4-204ENST00000357732 LYRM1O43325 122 aa16.67■□□□□ 0.26
RTN4-204ENST00000357732 IFNA8P32881 189 aa16.67■□□□□ 0.26
RTN4-204ENST00000357732 SLC1A3P43003 542 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms