RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 NOL9Q5SY16 702 aaKnown RBP6.28□□□□□ -1.4
VPS13B-202ENST00000357162 TNFAIP8L2Q6P589 184 aaPredicted RBP6.28□□□□□ -1.4
VPS13B-202ENST00000357162 ANKRD46Q86W74 232 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 NRSN1Q8IZ57 195 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 ZNF454Q8N9F8 522 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 OPA3Q9H6K4 179 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 CTPS2Q9NRF8 586 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 DEC1Q9P2X7 70 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 TMEM129A0AVI4 362 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 CHRNB1P11230 501 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 CDH8P55286 799 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 ITPK1Q13572 414 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 MSS51Q4VC12 460 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 PQLC3Q8N755 202 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 FNDC9Q8TBE3 224 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 NSMAFQ92636 917 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 ISL2Q96A47 359 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 EXOSC8Q96B26 276 aaKnown RBP6.28□□□□□ -1.4
VPS13B-202ENST00000357162 OR51V1Q9H2C8 321 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 SLC17A6Q9P2U8 582 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 HIF3AQ9Y2N7 669 aa6.28□□□□□ -1.4
VPS13B-202ENST00000357162 F5H5P2 479 aa6.27□□□□□ -1.4
VPS13B-202ENST00000357162 SLC34A2O95436 690 aa6.27□□□□□ -1.4
VPS13B-202ENST00000357162 C1QBP02746 253 aa6.27□□□□□ -1.4
VPS13B-202ENST00000357162 THBS3P49746 956 aa6.27□□□□□ -1.4
VPS13B-202ENST00000357162 MICAQ29983 383 aa6.27□□□□□ -1.4
VPS13B-202ENST00000357162 ADGRF3Q8IZF5 1079 aa6.27□□□□□ -1.4
VPS13B-202ENST00000357162 FAM46BQ96A09 425 aa6.27□□□□□ -1.4
VPS13B-202ENST00000357162 IMP4Q96G21 291 aaKnown RBP6.27□□□□□ -1.4
VPS13B-202ENST00000357162 TGM7Q96PF1 710 aa6.27□□□□□ -1.4
VPS13B-202ENST00000357162 PKP4Q99569 1192 aa6.27□□□□□ -1.4
VPS13B-202ENST00000357162 FAM83CQ9BQN1 747 aa6.27□□□□□ -1.4
VPS13B-202ENST00000357162 ACSS1Q9NUB1 689 aaPredicted RBP6.27□□□□□ -1.4
VPS13B-202ENST00000357162 PCDHGA8Q9Y5G5 932 aa6.27□□□□□ -1.4
VPS13B-202ENST00000357162 NFYBP25208 207 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 GLO1Q04760 184 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 RNF141Q8WVD5 230 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 C22orf15Q8WYQ4 148 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 TBL1XR1Q9BZK7 514 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 ACP6Q9NPH0 428 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 IMP3Q9NV31 184 aaKnown RBP6.27□□□□□ -1.41
VPS13B-202ENST00000357162 SLC6A5Q9Y345 797 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 COL14A1Q05707 1796 aaKnown RBP6.27□□□□□ -1.41
VPS13B-202ENST00000357162 TOPAZ1Q8N9V7 1692 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 UPK3BL1B0FP48 263 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 UPK3BL2E5RIL1 263 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 CPNE6O95741 557 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 PSMB1P20618 241 aaKnown RBP6.27□□□□□ -1.41
VPS13B-202ENST00000357162 CPOXP36551 454 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 RAB1AP62820 205 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 GINS1Q14691 196 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 PAPD4Q6PIY7 484 aaKnown RBP6.27□□□□□ -1.41
VPS13B-202ENST00000357162 OR8J2Q8NGG1 315 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 PTCHD1Q96NR3 888 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 ASIC5Q9NY37 505 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 SLCO3A1Q9UIG8 710 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 TFPIP10646 304 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 CXCR1P25024 350 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 OR12D2P58182 307 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 S100A10P60903 97 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 UFM1P61960 85 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 PDE12Q6L8Q7 609 aaKnown RBP6.27□□□□□ -1.41
VPS13B-202ENST00000357162 PGBD3Q8N328 593 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 OR10R2Q8NGX6 335 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 HRASLS5Q96KN8 279 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 SORT1Q99523 831 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 TCEAL2Q9H3H9 227 aaPredicted RBP6.27□□□□□ -1.41
VPS13B-202ENST00000357162 CPNE7Q9UBL6 633 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 KPTNQ9Y664 436 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 WDR81Q562E7 1941 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 FKTNO75072 461 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 ETV3P41162 512 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 TLE2Q04725 743 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 ATAD3CQ5T2N8 411 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 ZNF691Q5VV52 312 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 TPGS1Q6ZTW0 290 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 CLEC20AQ6ZU45 233 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 SPRED1Q7Z699 444 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 CMIPQ8IY22 773 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 IL17RCQ8NAC3 791 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 HOXB13Q92826 284 aaPredicted RBP6.27□□□□□ -1.41
VPS13B-202ENST00000357162 CCDC85CA6NKD9 419 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 ADRB3P13945 408 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 CD34P28906 385 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 PRSS3P35030 304 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 NFATC2Q13469 925 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 CLPPQ16740 277 aaPredicted RBP6.27□□□□□ -1.41
VPS13B-202ENST00000357162 CCNJQ5T5M9 372 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 SLC9B2Q86UD5 537 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 SLC2A13Q96QE2 648 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 LRIT2A6NDA9 550 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 STSP08842 583 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 GIPP09681 153 aaPredicted RBP6.27□□□□□ -1.41
VPS13B-202ENST00000357162 ATP1B2P14415 290 aaPredicted RBP6.27□□□□□ -1.41
VPS13B-202ENST00000357162 MELKQ14680 651 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 MPEG1Q2M385 716 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 FUNDC1Q8IVP5 155 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 MYADMQ96S97 322 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 TMEM106CQ9BVX2 250 aa6.27□□□□□ -1.41
VPS13B-202ENST00000357162 CDCA4Q9BXL8 241 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms