RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 ZNF140P52738 457 aaPredicted RBP6.26□□□□□ -1.41
TRIM38-201ENST00000357085 SELENOWP63302 87 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 ZNHIT3Q15649 155 aaPredicted RBP6.26□□□□□ -1.41
TRIM38-201ENST00000357085 RTL6Q6ICC9 239 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 RPL22L1Q6P5R6 122 aaKnown RBP6.26□□□□□ -1.41
TRIM38-201ENST00000357085 PTP4A1Q93096 173 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 MED8Q96G25 268 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 ATOH8Q96SQ7 321 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 FEVQ99581 238 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 SLC25A21Q9BQT8 299 aaPredicted RBP6.26□□□□□ -1.41
TRIM38-201ENST00000357085 TREM1Q9NP99 234 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 URADA6NGE7 173 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 H3BQ06 376 aaPredicted RBP6.26□□□□□ -1.41
TRIM38-201ENST00000357085 PTHP01270 115 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 PSMB1P20618 241 aaKnown RBP6.26□□□□□ -1.41
TRIM38-201ENST00000357085 HCCSP53701 268 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 RGS8P57771 180 aaPredicted RBP6.26□□□□□ -1.41
TRIM38-201ENST00000357085 E2F1Q01094 437 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 HYAL2Q12891 473 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 KLHL26Q53HC5 615 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 ATAT1Q5SQI0 421 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 NDUFAF7Q7L592 441 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 CPA6Q8N4T0 437 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 CERS5Q8N5B7 392 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 DCBLD1Q8N8Z6 715 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 TSSK3Q96PN8 268 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 KLHL5Q96PQ7 755 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 TMED9Q9BVK6 235 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 ASB8Q9H765 288 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 MAP10Q9P2G4 905 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 LRFN2Q9ULH4 789 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 SERTM1A2A2V5 107 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 GLULP15104 373 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 CCND3P30281 292 aaPredicted RBP6.26□□□□□ -1.41
TRIM38-201ENST00000357085 PAN2Q504Q3 1202 aaKnown RBP6.26□□□□□ -1.41
TRIM38-201ENST00000357085 GRHL2Q6ISB3 625 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 NOXRED1Q6NXP6 359 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 PAQR3Q6TCH7 311 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 ZNF467Q7Z7K2 595 aaPredicted RBP6.26□□□□□ -1.41
TRIM38-201ENST00000357085 LDB1Q86U70 411 aaPredicted RBP6.26□□□□□ -1.41
TRIM38-201ENST00000357085 OSTM1Q86WC4 334 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 LURAP1LQ8IV03 231 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 SPATA22Q8NHS9 363 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 TRAPPC12Q8WVT3 735 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 GIMAP5Q96F15 307 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 C3orf30Q96M34 536 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 HS6ST2Q96MM7 605 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 NECTIN4Q96NY8 510 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 C8orf33Q9H7E9 229 aaPredicted RBP6.26□□□□□ -1.41
TRIM38-201ENST00000357085 ZNF408Q9H9D4 720 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 USP21Q9UK80 565 aa6.26□□□□□ -1.41
TRIM38-201ENST00000357085 LTBP1Q14766 1721 aa6.25□□□□□ -1.41
TRIM38-201ENST00000357085 GON4LQ3T8J9 2241 aa6.25□□□□□ -1.41
TRIM38-201ENST00000357085 SYT5O00445 386 aa6.25□□□□□ -1.41
TRIM38-201ENST00000357085 KIAA0355O15063 1070 aa6.25□□□□□ -1.41
TRIM38-201ENST00000357085 ALPPL2P10696 532 aa6.25□□□□□ -1.41
TRIM38-201ENST00000357085 TBPP20226 339 aa6.25□□□□□ -1.41
TRIM38-201ENST00000357085 WSCD1Q658N2 575 aa6.25□□□□□ -1.41
TRIM38-201ENST00000357085 NADSYN1Q6IA69 706 aa6.25□□□□□ -1.41
TRIM38-201ENST00000357085 C17orf107Q6ZR85 190 aa6.25□□□□□ -1.41
TRIM38-201ENST00000357085 NUDT18Q6ZVK8 323 aa6.25□□□□□ -1.41
TRIM38-201ENST00000357085 ZMIZ2Q8NF64 920 aa6.25□□□□□ -1.41
TRIM38-201ENST00000357085 PIGKQ92643 395 aa6.25□□□□□ -1.41
TRIM38-201ENST00000357085 MRPS31Q92665 395 aaKnown RBP6.25□□□□□ -1.41
TRIM38-201ENST00000357085 OTUB2Q96DC9 234 aa6.25□□□□□ -1.41
TRIM38-201ENST00000357085 RNF32Q9H0A6 362 aa6.25□□□□□ -1.41
TRIM38-201ENST00000357085 CCDC86Q9H6F5 360 aaKnown RBP6.25□□□□□ -1.41
TRIM38-201ENST00000357085 FBXL4Q9UKA2 621 aa6.25□□□□□ -1.41
TRIM38-201ENST00000357085 A0A0A6YYJ9 748 aa6.25□□□□□ -1.41
TRIM38-201ENST00000357085 MT-CYBP00156 380 aaPredicted RBP6.25□□□□□ -1.41
TRIM38-201ENST00000357085 PRR35P0CG20 571 aa6.25□□□□□ -1.41
TRIM38-201ENST00000357085 UGT2B7P16662 529 aa6.25□□□□□ -1.41
TRIM38-201ENST00000357085 CALCRP30988 508 aa6.25□□□□□ -1.41
TRIM38-201ENST00000357085 TGFBR1P36897 503 aa6.25□□□□□ -1.41
TRIM38-201ENST00000357085 FAM111BQ6SJ93 734 aa6.25□□□□□ -1.41
TRIM38-201ENST00000357085 WASH2PQ6VEQ5 465 aa6.25□□□□□ -1.41
TRIM38-201ENST00000357085 IQCHQ86VS3 1027 aa6.25□□□□□ -1.41
TRIM38-201ENST00000357085 UPF1Q92900 1129 aaKnown RBP eCLIP6.25□□□□□ -1.41
TRIM38-201ENST00000357085 PIWIL1Q96J94 861 aaKnown RBP6.25□□□□□ -1.41
TRIM38-201ENST00000357085 SLC38A3Q99624 504 aa6.25□□□□□ -1.41
TRIM38-201ENST00000357085 SLC2A6Q9UGQ3 507 aa6.25□□□□□ -1.41
TRIM38-201ENST00000357085 CYTH4Q9UIA0 394 aa6.25□□□□□ -1.41
TRIM38-201ENST00000357085 SCML2Q9UQR0 700 aa6.25□□□□□ -1.41
TRIM38-201ENST00000357085 ERVK-19Q9WJR5 959 aa6.25□□□□□ -1.41
TRIM38-201ENST00000357085 RAI2Q9Y5P3 530 aa6.25□□□□□ -1.41
TRIM38-201ENST00000357085 DIRAS1O95057 198 aa6.25□□□□□ -1.41
TRIM38-201ENST00000357085 HK1P19367 917 aa6.25□□□□□ -1.41
TRIM38-201ENST00000357085 CLCNKAP51800 687 aa6.25□□□□□ -1.41
TRIM38-201ENST00000357085 DUSP28Q4G0W2 176 aa6.25□□□□□ -1.41
TRIM38-201ENST00000357085 C17orf64Q86WR6 236 aa6.25□□□□□ -1.41
TRIM38-201ENST00000357085 KIAA0319LQ8IZA0 1049 aa6.25□□□□□ -1.41
TRIM38-201ENST00000357085 NXPE1Q8N323 547 aa6.25□□□□□ -1.41
TRIM38-201ENST00000357085 C9orf62Q8N4C0 152 aa6.25□□□□□ -1.41
TRIM38-201ENST00000357085 SGK3Q96BR1 496 aa6.25□□□□□ -1.41
TRIM38-201ENST00000357085 NSUN5Q96P11 429 aaKnown RBP6.25□□□□□ -1.41
TRIM38-201ENST00000357085 IFNA6P05013 189 aa6.25□□□□□ -1.41
TRIM38-201ENST00000357085 ZDHHC11BP0C7U3 371 aa6.25□□□□□ -1.41
TRIM38-201ENST00000357085 PEA15Q15121 130 aa6.25□□□□□ -1.41
TRIM38-201ENST00000357085 CPSF6Q16630 551 aaKnown RBP eCLIP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms