RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 ARL5BQ96KC2 179 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 TSNAXQ99598 290 aaKnown RBP6.16□□□□□ -1.42
UPF2-201ENST00000356352 LPAR4Q99677 370 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 DPH7Q9BTV6 452 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 PAPOLGQ9BWT3 736 aaKnown RBP6.16□□□□□ -1.42
UPF2-201ENST00000356352 TMEM165Q9HC07 324 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 TMEM100Q9NV29 134 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 SLC6A14Q9UN76 642 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 IGHEP01854 428 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 GCH1P30793 250 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 HTR3AP46098 478 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 POU3F4P49335 361 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 PRKXP51817 358 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 ATXN7L3Q14CW9 347 aaPredicted RBP6.16□□□□□ -1.42
UPF2-201ENST00000356352 CST6Q15828 149 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 DEFB134Q4QY38 66 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 MPP7Q5T2T1 576 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 METTL2BQ6P1Q9 378 aaKnown RBP6.16□□□□□ -1.42
UPF2-201ENST00000356352 NIPAL3Q6P499 406 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 MARVELD2Q8N4S9 558 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 ANKK1Q8NFD2 765 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 OR5AK2Q8NH90 309 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 OR14L1PQ8NHC6 308 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 RNF128Q8TEB7 428 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 GLYATL2Q8WU03 294 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 DIO2Q92813 273 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 MRGPRX2Q96LB1 330 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 OR4K3Q96R72 315 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 ZNF649Q9BS31 505 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 RBCK1Q9BYM8 510 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 KLHL9Q9P2J3 617 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 AP1M2Q9Y6Q5 423 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 SLC35F4A4IF30 521 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 ANKRD33BA6NCL7 494 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 NAP1L6A6NFF2 107 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 ZNF860A6NHJ4 632 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 HEPACAM2A8MVW5 462 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 SSX5O60225 188 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 PEX10O60683 326 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 CHMP24386 653 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 KDELR2P33947 212 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 FOLR3P41439 243 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 MAGEA3P43357 314 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 AGTR2P50052 363 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 PLGLAQ15195 96 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 NTRK2Q16620 822 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 AKR1C8PQ5T2L2 129 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 ABHD17BQ5VST6 288 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 LEG1Q6P5S2 330 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 LARP4Q71RC2 724 aaKnown RBP eCLIP6.16□□□□□ -1.42
UPF2-201ENST00000356352 OR52N2Q8NGI0 321 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 TRMT10AQ8TBZ6 339 aaKnown RBP6.16□□□□□ -1.42
UPF2-201ENST00000356352 MS4A4EQ96PG1 132 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 GPR160Q9UJ42 338 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 C10orf71Q711Q0 1435 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 A8MXE2 369 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 FAM227AF5H4B4 570 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 H3BSH0 61 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 NARSO43776 548 aaKnown RBP6.16□□□□□ -1.42
UPF2-201ENST00000356352 FMO6PO60774 539 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 RAB3BP20337 219 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 DNASE1P24855 282 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 CD97P48960 835 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 TAS2R20P59543 309 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 CDK3Q00526 305 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 SCAPQ12770 1279 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 CNN3Q15417 329 aaKnown RBP6.16□□□□□ -1.42
UPF2-201ENST00000356352 UGT8Q16880 541 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 C6orf141Q5SZD1 244 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 OR56B2PQ8NGI1 322 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 OR10Q1Q8NGQ4 319 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 TANKQ92844 425 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 SNAPC3Q92966 411 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 MALSU1Q96EH3 234 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 BIRC8Q96P09 236 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 SMG9Q9H0W8 520 aaKnown RBP6.16□□□□□ -1.42
UPF2-201ENST00000356352 MYO5BQ9ULV0 1848 aa6.16□□□□□ -1.42
UPF2-201ENST00000356352 MED1Q15648 1581 aaPredicted RBP6.16□□□□□ -1.42
UPF2-201ENST00000356352 LOC102723532A0A0G2JNH3 316 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 CENPBD1B2RD01 187 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 HSBP1L1C9JCN9 74 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 CDC123O75794 336 aaPredicted RBP6.15□□□□□ -1.42
UPF2-201ENST00000356352 BEST1O76090 585 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 C6P13671 934 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 RRAS2P62070 204 aaPredicted RBP6.15□□□□□ -1.42
UPF2-201ENST00000356352 MRPS10P82664 201 aaKnown RBP6.15□□□□□ -1.42
UPF2-201ENST00000356352 KCNAB2Q13303 367 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 SPHARQ15513 63 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 TXNRD3NBQ6F5E7 133 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 TMEM151BQ8IW70 566 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 TEX26Q8N6G2 289 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 OR51D1Q8NGF3 324 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 WDR20Q8TBZ3 569 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 ADAMTS16Q8TE57 1224 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 SLC41A3Q96GZ6 507 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 SGIP1Q9BQI5 828 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 SRA1Q9HD15 236 aaKnown RBP6.15□□□□□ -1.42
UPF2-201ENST00000356352 ST14Q9Y5Y6 855 aa6.15□□□□□ -1.42
UPF2-201ENST00000356352 AFDNP55196 1824 aaKnown RBP6.15□□□□□ -1.42
UPF2-201ENST00000356352 CAMTA1Q9Y6Y1 1673 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms