RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 MTFR2Q6P444 385 aa12.62□□□□□ -0.39
NCDN-201ENST00000356090 HSDL2Q6YN16 418 aa12.62□□□□□ -0.39
NCDN-201ENST00000356090 FAM92BQ6ZTR7 304 aa12.62□□□□□ -0.39
NCDN-201ENST00000356090 SLC9B2Q86UD5 537 aa12.62□□□□□ -0.39
NCDN-201ENST00000356090 CCDC116Q8IYX3 515 aa12.62□□□□□ -0.39
NCDN-201ENST00000356090 ANKK1Q8NFD2 765 aa12.62□□□□□ -0.39
NCDN-201ENST00000356090 ING5Q8WYH8 240 aa12.62□□□□□ -0.39
NCDN-201ENST00000356090 CLIP3Q96DZ5 547 aa12.62□□□□□ -0.39
NCDN-201ENST00000356090 SECISBP2Q96T21 854 aaKnown RBP12.62□□□□□ -0.39
NCDN-201ENST00000356090 SAP130Q9H0E3 1048 aa12.62□□□□□ -0.39
NCDN-201ENST00000356090 LSM2Q9Y333 95 aaKnown RBP12.62□□□□□ -0.39
NCDN-201ENST00000356090 NPIPB8E9PQR5 432 aa12.61□□□□□ -0.39
NCDN-201ENST00000356090 ERVH48-1M5A8F1 160 aa12.61□□□□□ -0.39
NCDN-201ENST00000356090 HMGN4O00479 90 aa12.61□□□□□ -0.39
NCDN-201ENST00000356090 LATO43561 262 aa12.61□□□□□ -0.39
NCDN-201ENST00000356090 HRO43593 1189 aa12.61□□□□□ -0.39
NCDN-201ENST00000356090 LATS1O95835 1130 aa12.61□□□□□ -0.39
NCDN-201ENST00000356090 PIPP12273 146 aaPredicted RBP12.61□□□□□ -0.39
NCDN-201ENST00000356090 E2F2Q14209 437 aa12.61□□□□□ -0.39
NCDN-201ENST00000356090 GPNMBQ14956 572 aa12.61□□□□□ -0.39
NCDN-201ENST00000356090 C9orf64Q5T6V5 341 aa12.61□□□□□ -0.39
NCDN-201ENST00000356090 HENMT1Q5T8I9 393 aaKnown RBP12.61□□□□□ -0.39
NCDN-201ENST00000356090 BCL2L15Q5TBC7 163 aa12.61□□□□□ -0.39
NCDN-201ENST00000356090 ZNF770Q6IQ21 691 aaPredicted RBP12.61□□□□□ -0.39
NCDN-201ENST00000356090 HTR3DQ70Z44 454 aa12.61□□□□□ -0.39
NCDN-201ENST00000356090 OR8H3Q8N146 312 aa12.61□□□□□ -0.39
NCDN-201ENST00000356090 TMEM145Q8NBT3 493 aa12.61□□□□□ -0.39
NCDN-201ENST00000356090 CD99L2Q8TCZ2 262 aa12.61□□□□□ -0.39
NCDN-201ENST00000356090 TCEAL4Q96EI5 215 aa12.61□□□□□ -0.39
NCDN-201ENST00000356090 GPA33Q99795 319 aa12.61□□□□□ -0.39
NCDN-201ENST00000356090 IL36AQ9UHA7 158 aa12.61□□□□□ -0.39
NCDN-201ENST00000356090 CACNA1CQ13936 2221 aa12.61□□□□□ -0.39
NCDN-201ENST00000356090 A0A1W2PPK0 400 aa12.61□□□□□ -0.39
NCDN-201ENST00000356090 RECKO95980 971 aa12.61□□□□□ -0.39
NCDN-201ENST00000356090 PAICSP22234 425 aaKnown RBP12.61□□□□□ -0.39
NCDN-201ENST00000356090 CST5P28325 142 aaPredicted RBP12.61□□□□□ -0.39
NCDN-201ENST00000356090 PXNP49023 591 aaPredicted RBP12.61□□□□□ -0.39
NCDN-201ENST00000356090 SP3Q02447 781 aa12.61□□□□□ -0.39
NCDN-201ENST00000356090 COX10Q12887 443 aa12.61□□□□□ -0.39
NCDN-201ENST00000356090 LIPIQ6XZB0 460 aa12.61□□□□□ -0.39
NCDN-201ENST00000356090 OR6C4Q8NGE1 309 aa12.61□□□□□ -0.39
NCDN-201ENST00000356090 OR5P2Q8WZ92 322 aa12.61□□□□□ -0.39
NCDN-201ENST00000356090 ARSGQ96EG1 525 aa12.61□□□□□ -0.39
NCDN-201ENST00000356090 ZFP3Q96NJ6 502 aa12.61□□□□□ -0.39
NCDN-201ENST00000356090 AIF1LQ9BQI0 150 aa12.61□□□□□ -0.39
NCDN-201ENST00000356090 CPEB1Q9BZB8 566 aaKnown RBP12.61□□□□□ -0.39
NCDN-201ENST00000356090 XKR8Q9H6D3 395 aa12.61□□□□□ -0.39
NCDN-201ENST00000356090 CRYZL1O95825 349 aa12.6□□□□□ -0.39
NCDN-201ENST00000356090 GNSP15586 552 aa12.6□□□□□ -0.39
NCDN-201ENST00000356090 DDCP20711 480 aa12.6□□□□□ -0.39
NCDN-201ENST00000356090 SLC36A4Q6YBV0 504 aa12.6□□□□□ -0.39
NCDN-201ENST00000356090 DCLRE1CQ96SD1 692 aaKnown RBP12.6□□□□□ -0.39
NCDN-201ENST00000356090 TEX12Q9BXU0 123 aa12.6□□□□□ -0.39
NCDN-201ENST00000356090 ZCCHC2Q9C0B9 1178 aaKnown RBP12.6□□□□□ -0.39
NCDN-201ENST00000356090 NTNG1Q9Y2I2 539 aa12.6□□□□□ -0.39
NCDN-201ENST00000356090 ICMTO60725 284 aa12.6□□□□□ -0.39
NCDN-201ENST00000356090 LIMS1P48059 325 aa12.6□□□□□ -0.39
NCDN-201ENST00000356090 KCNJ5P48544 419 aa12.6□□□□□ -0.39
NCDN-201ENST00000356090 PPP3R1P63098 170 aa12.6□□□□□ -0.39
NCDN-201ENST00000356090 TEKQ02763 1124 aa12.6□□□□□ -0.39
NCDN-201ENST00000356090 MAB21L1Q13394 359 aa12.6□□□□□ -0.39
NCDN-201ENST00000356090 PLK5Q496M5 336 aa12.6□□□□□ -0.39
NCDN-201ENST00000356090 FAM209AQ5JX71 171 aa12.6□□□□□ -0.39
NCDN-201ENST00000356090 FAM205BPQ63HN1 556 aa12.6□□□□□ -0.39
NCDN-201ENST00000356090 ARL9Q6T311 187 aa12.6□□□□□ -0.39
NCDN-201ENST00000356090 AMER3Q8N944 861 aa12.6□□□□□ -0.39
NCDN-201ENST00000356090 GOT1L1Q8NHS2 421 aaPredicted RBP12.6□□□□□ -0.39
NCDN-201ENST00000356090 RASSF5Q8WWW0 418 aa12.6□□□□□ -0.39
NCDN-201ENST00000356090 TFGQ92734 400 aaPredicted RBP12.6□□□□□ -0.39
NCDN-201ENST00000356090 RAD51AP1Q96B01 352 aa12.6□□□□□ -0.39
NCDN-201ENST00000356090 METTL2AQ96IZ6 378 aaKnown RBP12.6□□□□□ -0.39
NCDN-201ENST00000356090 QRFPRQ96P65 431 aa12.6□□□□□ -0.39
NCDN-201ENST00000356090 MED28Q9H204 178 aa12.6□□□□□ -0.39
NCDN-201ENST00000356090 HMX1Q9NP08 348 aaPredicted RBP12.6□□□□□ -0.39
NCDN-201ENST00000356090 DIMT1Q9UNQ2 313 aaKnown RBP12.6□□□□□ -0.39
NCDN-201ENST00000356090 MYO9BQ13459 2157 aa12.6□□□□□ -0.39
NCDN-201ENST00000356090 NPC1O15118 1278 aa12.6□□□□□ -0.39
NCDN-201ENST00000356090 TGM5O43548 720 aa12.6□□□□□ -0.39
NCDN-201ENST00000356090 FGBP02675 491 aa12.6□□□□□ -0.39
NCDN-201ENST00000356090 CTSLP07711 333 aa12.6□□□□□ -0.39
NCDN-201ENST00000356090 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.6□□□□□ -0.39
NCDN-201ENST00000356090 GLYR1Q49A26 553 aaPredicted RBP12.6□□□□□ -0.39
NCDN-201ENST00000356090 FLYWCH1Q4VC44 716 aa12.6□□□□□ -0.39
NCDN-201ENST00000356090 KHDRBS2Q5VWX1 349 aaKnown RBP12.6□□□□□ -0.39
NCDN-201ENST00000356090 MZT2AQ6P582 158 aa12.6□□□□□ -0.39
NCDN-201ENST00000356090 CLDN22Q8N7P3 220 aa12.6□□□□□ -0.39
NCDN-201ENST00000356090 SAMD12Q8N8I0 201 aa12.6□□□□□ -0.39
NCDN-201ENST00000356090 SMG7Q92540 1137 aaKnown RBP12.6□□□□□ -0.39
NCDN-201ENST00000356090 SERHL2Q9H4I8 314 aa12.6□□□□□ -0.39
NCDN-201ENST00000356090 NEUROD4Q9HD90 331 aa12.6□□□□□ -0.39
NCDN-201ENST00000356090 DVL2O14641 736 aa12.59□□□□□ -0.39
NCDN-201ENST00000356090 EEF1E1O43324 174 aaKnown RBP12.59□□□□□ -0.39
NCDN-201ENST00000356090 EVI2BP34910 448 aa12.59□□□□□ -0.39
NCDN-201ENST00000356090 RAB33AQ14088 237 aa12.59□□□□□ -0.39
NCDN-201ENST00000356090 PIP5KL1Q5T9C9 394 aa12.59□□□□□ -0.39
NCDN-201ENST00000356090 COMTD1Q86VU5 262 aa12.59□□□□□ -0.39
NCDN-201ENST00000356090 ADGRF3Q8IZF5 1079 aa12.59□□□□□ -0.39
NCDN-201ENST00000356090 LRRC17Q8N6Y2 441 aa12.59□□□□□ -0.39
NCDN-201ENST00000356090 ZNF689Q96CS4 500 aaPredicted RBP12.59□□□□□ -0.39
NCDN-201ENST00000356090 NEURL3Q96EH8 262 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms