RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 C10orf107Q8IVU9 208 aa15.31■□□□□ 0.04
PDLIM7-201ENST00000355572 TAGAPQ8N103 731 aa15.31■□□□□ 0.04
PDLIM7-201ENST00000355572 GBP7Q8N8V2 638 aaPredicted RBP15.31■□□□□ 0.04
PDLIM7-201ENST00000355572 OR7G2Q8NG99 324 aa15.31■□□□□ 0.04
PDLIM7-201ENST00000355572 OR2T11Q8NH01 316 aa15.31■□□□□ 0.04
PDLIM7-201ENST00000355572 ZNF675Q8TD23 568 aa15.31■□□□□ 0.04
PDLIM7-201ENST00000355572 OMA1Q96E52 524 aa15.31■□□□□ 0.04
PDLIM7-201ENST00000355572 EGLN2Q96KS0 407 aa15.31■□□□□ 0.04
PDLIM7-201ENST00000355572 GNRHR2Q96P88 292 aa15.31■□□□□ 0.04
PDLIM7-201ENST00000355572 TREX2Q9BQ50 279 aaPredicted RBP15.31■□□□□ 0.04
PDLIM7-201ENST00000355572 TTYH2Q9BSA4 534 aa15.31■□□□□ 0.04
PDLIM7-201ENST00000355572 GATA5Q9BWX5 397 aaPredicted RBP15.31■□□□□ 0.04
PDLIM7-201ENST00000355572 ENKD1Q9H0I2 346 aa15.31■□□□□ 0.04
PDLIM7-201ENST00000355572 TUBB1Q9H4B7 451 aa15.31■□□□□ 0.04
PDLIM7-201ENST00000355572 LDAHQ9H6V9 325 aa15.31■□□□□ 0.04
PDLIM7-201ENST00000355572 GALNT9Q9HCQ5 603 aa15.31■□□□□ 0.04
PDLIM7-201ENST00000355572 SIRT5Q9NXA8 310 aa15.31■□□□□ 0.04
PDLIM7-201ENST00000355572 BOKQ9UMX3 212 aaPredicted RBP15.31■□□□□ 0.04
PDLIM7-201ENST00000355572 A0A0G2JNJ9 132 aa15.3■□□□□ 0.04
PDLIM7-201ENST00000355572 GNG14A0A1W2PPG7 69 aa15.3■□□□□ 0.04
PDLIM7-201ENST00000355572 ANKRD33BA6NCL7 494 aa15.3■□□□□ 0.04
PDLIM7-201ENST00000355572 OR14I1A6ND48 311 aa15.3■□□□□ 0.04
PDLIM7-201ENST00000355572 GOLGA6L10A6NI86 522 aa15.3■□□□□ 0.04
PDLIM7-201ENST00000355572 GNB5O14775 395 aa15.3■□□□□ 0.04
PDLIM7-201ENST00000355572 GUCY1B2O75343 617 aa15.3■□□□□ 0.04
PDLIM7-201ENST00000355572 PPM1BO75688 479 aa15.3■□□□□ 0.04
PDLIM7-201ENST00000355572 TOXO94900 526 aa15.3■□□□□ 0.04
PDLIM7-201ENST00000355572 ANXA4P09525 319 aaPredicted RBP15.3■□□□□ 0.04
PDLIM7-201ENST00000355572 COX6B1P14854 86 aa15.3■□□□□ 0.04
PDLIM7-201ENST00000355572 TACR1P25103 407 aa15.3■□□□□ 0.04
PDLIM7-201ENST00000355572 ACVR2AP27037 513 aa15.3■□□□□ 0.04
PDLIM7-201ENST00000355572 ARRB2P32121 409 aa15.3■□□□□ 0.04
PDLIM7-201ENST00000355572 DNAJB13P59910 316 aa15.3■□□□□ 0.04
PDLIM7-201ENST00000355572 EIPR1Q53HC9 387 aa15.3■□□□□ 0.04
PDLIM7-201ENST00000355572 SPIN4Q56A73 249 aa15.3■□□□□ 0.04
PDLIM7-201ENST00000355572 FAM71E1Q6IPT2 247 aa15.3■□□□□ 0.04
PDLIM7-201ENST00000355572 PAOXQ6QHF9 649 aa15.3■□□□□ 0.04
PDLIM7-201ENST00000355572 DND1Q8IYX4 353 aaKnown RBP15.3■□□□□ 0.04
PDLIM7-201ENST00000355572 C17orf47Q8NEP4 570 aa15.3■□□□□ 0.04
PDLIM7-201ENST00000355572 OR4N2Q8NGD1 307 aa15.3■□□□□ 0.04
PDLIM7-201ENST00000355572 CDC26Q8NHZ8 85 aa15.3■□□□□ 0.04
PDLIM7-201ENST00000355572 NEIL3Q8TAT5 605 aa15.3■□□□□ 0.04
PDLIM7-201ENST00000355572 CA5BP1Q8WTZ4 195 aa15.3■□□□□ 0.04
PDLIM7-201ENST00000355572 LCORQ96JN0 433 aaPredicted RBP15.3■□□□□ 0.04
PDLIM7-201ENST00000355572 MECRQ9BV79 373 aa15.3■□□□□ 0.04
PDLIM7-201ENST00000355572 FAIM2Q9BWQ8 316 aa15.3■□□□□ 0.04
PDLIM7-201ENST00000355572 ACKR4Q9NPB9 350 aa15.3■□□□□ 0.04
PDLIM7-201ENST00000355572 CHST11Q9NPF2 352 aa15.3■□□□□ 0.04
PDLIM7-201ENST00000355572 NMRK1Q9NWW6 199 aa15.3■□□□□ 0.04
PDLIM7-201ENST00000355572 SLC17A7Q9P2U7 560 aa15.3■□□□□ 0.04
PDLIM7-201ENST00000355572 Q9UFV3 132 aa15.3■□□□□ 0.04
PDLIM7-201ENST00000355572 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.3■□□□□ 0.04
PDLIM7-201ENST00000355572 SLC6A5Q9Y345 797 aa15.3■□□□□ 0.04
PDLIM7-201ENST00000355572 V9GYY5 206 aaPredicted RBP15.3■□□□□ 0.04
PDLIM7-201ENST00000355572 TLDC2A0PJX2 215 aa15.29■□□□□ 0.04
PDLIM7-201ENST00000355572 TMEM233B4DJY2 109 aa15.29■□□□□ 0.04
PDLIM7-201ENST00000355572 BCKDKO14874 412 aa15.29■□□□□ 0.04
PDLIM7-201ENST00000355572 HCN1O60741 890 aa15.29■□□□□ 0.04
PDLIM7-201ENST00000355572 CT45A8P0DMV1 189 aa15.29■□□□□ 0.04
PDLIM7-201ENST00000355572 CT45A9P0DMV2 189 aa15.29■□□□□ 0.04
PDLIM7-201ENST00000355572 CPA3P15088 417 aa15.29■□□□□ 0.04
PDLIM7-201ENST00000355572 IGFBP2P18065 325 aa15.29■□□□□ 0.04
PDLIM7-201ENST00000355572 GDF1P27539 372 aa15.29■□□□□ 0.04
PDLIM7-201ENST00000355572 PTPN6P29350 595 aa15.29■□□□□ 0.04
PDLIM7-201ENST00000355572 CRYZQ08257 329 aaKnown RBP15.29■□□□□ 0.04
PDLIM7-201ENST00000355572 KIAA0040Q15053 153 aa15.29■□□□□ 0.04
PDLIM7-201ENST00000355572 CCDC153Q494R4 210 aa15.29■□□□□ 0.04
PDLIM7-201ENST00000355572 CT45A2Q5DJT8 189 aa15.29■□□□□ 0.04
PDLIM7-201ENST00000355572 TRIM46Q7Z4K8 759 aa15.29■□□□□ 0.04
PDLIM7-201ENST00000355572 WDR53Q7Z5U6 358 aaPredicted RBP15.29■□□□□ 0.04
PDLIM7-201ENST00000355572 NAXEQ8NCW5 288 aa15.29■□□□□ 0.04
PDLIM7-201ENST00000355572 LILRB4Q8NHJ6 448 aa15.29■□□□□ 0.04
PDLIM7-201ENST00000355572 RND1Q92730 232 aa15.29■□□□□ 0.04
PDLIM7-201ENST00000355572 TMBIM1Q969X1 311 aa15.29■□□□□ 0.04
PDLIM7-201ENST00000355572 ZNF597Q96LX8 424 aa15.29■□□□□ 0.04
PDLIM7-201ENST00000355572 VSTM2LQ96N03 204 aa15.29■□□□□ 0.04
PDLIM7-201ENST00000355572 SLC35C2Q9NQQ7 365 aa15.29■□□□□ 0.04
PDLIM7-201ENST00000355572 ALKBH4Q9NXW9 302 aa15.29■□□□□ 0.04
PDLIM7-201ENST00000355572 GRID1Q9ULK0 1009 aa15.29■□□□□ 0.04
PDLIM7-201ENST00000355572 GPR55Q9Y2T6 319 aaPredicted RBP15.29■□□□□ 0.04
PDLIM7-201ENST00000355572 C15orf41Q9Y2V0 281 aa15.29■□□□□ 0.04
PDLIM7-201ENST00000355572 ADGRG4Q8IZF6 3080 aa15.29■□□□□ 0.04
PDLIM7-201ENST00000355572 MED12LQ86YW9 2145 aa15.28■□□□□ 0.04
PDLIM7-201ENST00000355572 COPEO14579 308 aa15.28■□□□□ 0.04
PDLIM7-201ENST00000355572 CHRNGP07510 517 aa15.28■□□□□ 0.04
PDLIM7-201ENST00000355572 DRD2P14416 443 aa15.28■□□□□ 0.04
PDLIM7-201ENST00000355572 PPICP45877 212 aa15.28■□□□□ 0.04
PDLIM7-201ENST00000355572 CDK9P50750 372 aaKnown RBP15.28■□□□□ 0.04
PDLIM7-201ENST00000355572 C2orf80Q0P641 193 aa15.28■□□□□ 0.04
PDLIM7-201ENST00000355572 ZNF385BQ569K4 471 aa15.28■□□□□ 0.04
PDLIM7-201ENST00000355572 SPDYAQ5MJ70 313 aa15.28■□□□□ 0.04
PDLIM7-201ENST00000355572 WIPI1Q5MNZ9 446 aaPredicted RBP15.28■□□□□ 0.04
PDLIM7-201ENST00000355572 C1orf185Q5T7R7 199 aa15.28■□□□□ 0.04
PDLIM7-201ENST00000355572 CES4AQ5XG92 561 aa15.28■□□□□ 0.04
PDLIM7-201ENST00000355572 TMEM211Q6ICI0 200 aa15.28■□□□□ 0.04
PDLIM7-201ENST00000355572 ANKRD26P1Q6NSI1 321 aa15.28■□□□□ 0.04
PDLIM7-201ENST00000355572 Q6ZSR9 355 aa15.28■□□□□ 0.04
PDLIM7-201ENST00000355572 TRABD2AQ86V40 505 aa15.28■□□□□ 0.04
PDLIM7-201ENST00000355572 BANPQ8N9N5 519 aa15.28■□□□□ 0.04
PDLIM7-201ENST00000355572 AENQ8WTP8 325 aaKnown RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms