RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 FAM74A3Q4VXF1 159 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 TMEM220Q6QAJ8 160 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 PAQR6Q6TCH4 344 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 HTR3DQ70Z44 454 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 BCDIN3DQ7Z5W3 292 aaKnown RBP8.88□□□□□ -0.99
SMG6-202ENST00000354901 GPAT4Q86UL3 456 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 LURAP1LQ8IV03 231 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 NPAS3Q8IXF0 933 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 MMP21Q8N119 569 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 OR9Q2Q8NGE9 314 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 OR2A12Q8NGT7 310 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 LYSMD1Q96S90 227 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 NRTNQ99748 197 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 ACTR6Q9GZN1 396 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 SLC6A15Q9H2J7 730 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 MYO9BQ13459 2157 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 LTBP2Q14767 1821 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 NUMA1Q14980 2115 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 SCAMP2O15127 329 aaKnown RBP8.88□□□□□ -0.99
SMG6-202ENST00000354901 LATS1O95835 1130 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 EFEMP2O95967 443 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 RAB3AP20336 220 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 TRIM23P36406 574 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 AP1S2P56377 157 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 CTBP2P56545 445 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 HBA1P69905 142 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 LRRC74AQ0VAA2 488 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 MTAPQ13126 283 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 ZNF169Q14929 603 aaPredicted RBP8.88□□□□□ -0.99
SMG6-202ENST00000354901 RASGEF1AQ8N9B8 481 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 TMEM145Q8NBT3 493 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 NFKBIDQ8NI38 313 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 WDR20Q8TBZ3 569 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 KLHL6Q8WZ60 621 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 ECHDC3Q96DC8 303 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 NPAS1Q99742 590 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 SLC28A3Q9HAS3 691 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 FAM120CQ9NX05 1096 aaKnown RBP8.88□□□□□ -0.99
SMG6-202ENST00000354901 SH2B3Q9UQQ2 575 aa8.88□□□□□ -0.99
SMG6-202ENST00000354901 IGLV3-16A0A075B6K0 115 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 A0A0A6YYJ9 748 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 ABHD14A-ACY1A0A1B0GW23 586 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 RPS10-NUDT3A0A1W2PQS6 291 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 SLC22A23A1A5C7 686 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 FAM227AF5H4B4 570 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 KPNA3O00505 521 aaPredicted RBP8.87□□□□□ -0.99
SMG6-202ENST00000354901 GRM6O15303 877 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 OLFM2O95897 454 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 CATP04040 527 aaKnown RBP8.87□□□□□ -0.99
SMG6-202ENST00000354901 RRASP10301 218 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 HLA-EP13747 358 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 RAE1P78406 368 aaKnown RBP8.87□□□□□ -0.99
SMG6-202ENST00000354901 KCNJ10P78508 379 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 RIN1Q13671 783 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 COL9A2Q14055 689 aaPredicted RBP8.87□□□□□ -0.99
SMG6-202ENST00000354901 GRIN2CQ14957 1233 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 SWI5Q1ZZU3 235 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 KLHL22Q53GT1 634 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 PLEKHS1Q5SXH7 462 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 MTFR2Q6P444 385 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 PDZD3Q86UT5 571 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 RNF130Q86XS8 419 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 TRAPPC5Q8IUR0 188 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 C11orf65Q8NCR3 313 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 ZNF740Q8NDX6 193 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 OR10G2Q8NGC3 310 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 OR8D4Q8NGM9 314 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 ZNF578Q96N58 590 aaPredicted RBP8.87□□□□□ -0.99
SMG6-202ENST00000354901 PKP4Q99569 1192 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 NIPSNAP1Q9BPW8 284 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 RBFOX1Q9NWB1 397 aaKnown RBP8.87□□□□□ -0.99
SMG6-202ENST00000354901 HS3ST2Q9Y278 367 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 MYO10Q9HD67 2058 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 A0A0G2JPF8 293 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 HNRNPCL3B7ZW38 293 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 H7C2Y5 167 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 CASKO14936 926 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 SULT1B1O43704 296 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 HNRNPCL4P0DMR1 293 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 TYRP14679 529 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 POU3F2P20265 443 aaPredicted RBP8.87□□□□□ -0.99
SMG6-202ENST00000354901 STOMP27105 288 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 IMPA1P29218 277 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 CSNK1DP48730 415 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 METAP1P53582 386 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 ITGA1P56199 1179 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 TSPAN5P62079 268 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 RPS26P62854 115 aaKnown RBP8.87□□□□□ -0.99
SMG6-202ENST00000354901 POLR2LP62875 67 aaKnown RBP8.87□□□□□ -0.99
SMG6-202ENST00000354901 LY6G5CQ5SRR4 150 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 LIPJQ5W064 366 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 GPR139Q6DWJ6 353 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 PTCHD4Q6ZW05 846 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 FAM124AQ86V42 546 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 CFAP206Q8IYR0 622 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 OR2T35Q8NGX2 323 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 AP2M1Q96CW1 435 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 C7orf34Q96L11 122 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 RBP7Q96R05 134 aa8.87□□□□□ -0.99
SMG6-202ENST00000354901 SLC35A5Q9BS91 424 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms