RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 GANCQ8TET4 914 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 GTF3C2Q8WUA4 911 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-201ENST00000352993 HMGB4Q8WW32 186 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 PRR14Q9BWN1 585 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 OR10A4Q9H209 315 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 PDFQ9HBH1 243 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 MIEF1Q9NQG6 463 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 MGAT4CQ9UBM8 478 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 SCML2Q9UQR0 700 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 RASD1Q9Y272 281 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 ASB4Q9Y574 426 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 KCNMB2Q9Y691 235 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 IGLV3-10A0A075B6K4 115 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 TRDV1A0A1B0GX56 115 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 SHISA3A0PJX4 238 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 C1orf226A1L170 272 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 DRGXA6NNA5 263 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 E7EQ34 232 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 H7C2Y5 167 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 DVL2O14641 736 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 PGRMC2O15173 223 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 PRAMEF4O60810 478 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 MTX2O75431 263 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 CBX7O95931 251 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 URODP06132 367 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 EPHX1P07099 455 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 PEPDP12955 493 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 RPS12P25398 132 aaKnown RBP7.22□□□□□ -1.25
BRCA1-201ENST00000352993 ELAVL4P26378 380 aaKnown RBP7.22□□□□□ -1.25
BRCA1-201ENST00000352993 MMP12P39900 470 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 GIPRP48546 466 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 SELENOPP49908 381 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 CDH11P55287 796 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 GPR17Q13304 367 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 TPBGQ13641 420 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 DSG2Q14126 1118 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 ZNF385BQ569K4 471 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 SPIN4Q56A73 249 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 SFRP5Q5T4F7 317 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 PRAMEF9Q5VWM5 478 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 NCEH1Q6PIU2 408 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 ADAMTS19Q8TE59 1207 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 UBTD2Q8WUN7 234 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 EID2BQ96D98 161 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 FUZQ9BT04 418 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 RNF32Q9H0A6 362 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 SLC6A17Q9H1V8 727 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 IL26Q9NPH9 171 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 GPATCH2Q9NW75 528 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 SEC14L3Q9UDX4 400 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 GLS2Q9UI32 602 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 GBF1Q92538 1859 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 TRIP12Q14669 1992 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-201ENST00000352993 SYNDIG1LA6NDD5 238 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 STK25O00506 426 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 ZNF197O14709 1029 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 FFAR1O14842 300 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 ARPC5O15511 151 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 ETHE1O95571 254 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 LPLP06858 475 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 SLC11A2P49281 568 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 RPS13P62277 151 aaKnown RBP7.22□□□□□ -1.25
BRCA1-201ENST00000352993 ERVK-25P63136 954 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 CRHR2Q13324 411 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 DUSP28Q4G0W2 176 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 SLC25A25Q6KCM7 469 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 IZUMO1Q8IYV9 350 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 KLHL36Q8N4N3 616 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 SPRYD4Q8WW59 207 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-201ENST00000352993 PTP4A1Q93096 173 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 SLC38A2Q96QD8 506 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 ZNF69Q9UC07 566 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 FLVCR2Q9UPI3 526 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 PRELID3BQ9Y3B1 194 aa7.22□□□□□ -1.25
BRCA1-201ENST00000352993 EXOSC1Q9Y3B2 195 aaKnown RBP7.22□□□□□ -1.25
BRCA1-201ENST00000352993 POLR2AP24928 1970 aaKnown RBP7.21□□□□□ -1.25
BRCA1-201ENST00000352993 FXYD6-FXYD2A0A087WZ82 144 aa7.21□□□□□ -1.25
BRCA1-201ENST00000352993 A0A1W2PPK0 400 aa7.21□□□□□ -1.25
BRCA1-201ENST00000352993 A0A1W2PRB8 838 aa7.21□□□□□ -1.25
BRCA1-201ENST00000352993 FAAHO00519 579 aa7.21□□□□□ -1.25
BRCA1-201ENST00000352993 KDELR3O43731 214 aa7.21□□□□□ -1.25
BRCA1-201ENST00000352993 TGFB1P01137 390 aa7.21□□□□□ -1.25
BRCA1-201ENST00000352993 PTNP21246 168 aa7.21□□□□□ -1.25
BRCA1-201ENST00000352993 ACRV1P26436 265 aa7.21□□□□□ -1.25
BRCA1-201ENST00000352993 CSKP41240 450 aa7.21□□□□□ -1.25
BRCA1-201ENST00000352993 RECQLP46063 649 aaPredicted RBP7.21□□□□□ -1.25
BRCA1-201ENST00000352993 FNTBP49356 437 aa7.21□□□□□ -1.25
BRCA1-201ENST00000352993 GDI2P50395 445 aaKnown RBP7.21□□□□□ -1.25
BRCA1-201ENST00000352993 KCNA10Q16322 511 aa7.21□□□□□ -1.25
BRCA1-201ENST00000352993 OCLNQ16625 522 aa7.21□□□□□ -1.25
BRCA1-201ENST00000352993 REEP3Q6NUK4 255 aa7.21□□□□□ -1.25
BRCA1-201ENST00000352993 PGBD2Q6P3X8 592 aa7.21□□□□□ -1.25
BRCA1-201ENST00000352993 ARL9Q6T311 187 aa7.21□□□□□ -1.25
BRCA1-201ENST00000352993 SLC36A4Q6YBV0 504 aa7.21□□□□□ -1.25
BRCA1-201ENST00000352993 LRRC28Q86X40 367 aaPredicted RBP7.21□□□□□ -1.25
BRCA1-201ENST00000352993 ZNF687Q8N1G0 1237 aa7.21□□□□□ -1.25
BRCA1-201ENST00000352993 ZNF454Q8N9F8 522 aa7.21□□□□□ -1.25
BRCA1-201ENST00000352993 ABHD1Q96SE0 405 aa7.21□□□□□ -1.25
BRCA1-201ENST00000352993 DPYSL5Q9BPU6 564 aa7.21□□□□□ -1.25
BRCA1-201ENST00000352993 SEC22CQ9BRL7 303 aa7.21□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms