RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 OR56B4Q8NH76 319 aa12.54□□□□□ -0.4
IFT88-202ENST00000351808 RBM14Q96PK6 669 aaKnown RBP12.54□□□□□ -0.4
IFT88-202ENST00000351808 GPR20Q99678 358 aa12.54□□□□□ -0.4
IFT88-202ENST00000351808 OR51M1Q9H341 326 aa12.54□□□□□ -0.4
IFT88-202ENST00000351808 EXOSC3Q9NQT5 275 aaKnown RBP12.54□□□□□ -0.4
IFT88-202ENST00000351808 C14orf105Q9NVL8 296 aa12.54□□□□□ -0.4
IFT88-202ENST00000351808 KLK14Q9P0G3 267 aa12.54□□□□□ -0.4
IFT88-202ENST00000351808 PRR23D1E9PI22 279 aaPredicted RBP12.53□□□□□ -0.4
IFT88-202ENST00000351808 PIRO00625 290 aa12.53□□□□□ -0.4
IFT88-202ENST00000351808 SEMA7AO75326 666 aa12.53□□□□□ -0.4
IFT88-202ENST00000351808 IGF2P01344 180 aa12.53□□□□□ -0.4
IFT88-202ENST00000351808 CRYBA1P05813 215 aa12.53□□□□□ -0.4
IFT88-202ENST00000351808 PRR23D2P0DMB1 279 aaPredicted RBP12.53□□□□□ -0.4
IFT88-202ENST00000351808 CBSLP0DN79 551 aa12.53□□□□□ -0.4
IFT88-202ENST00000351808 COX7A2P14406 83 aa12.53□□□□□ -0.4
IFT88-202ENST00000351808 CELP19835 753 aa12.53□□□□□ -0.4
IFT88-202ENST00000351808 AKAP5P24588 427 aa12.53□□□□□ -0.4
IFT88-202ENST00000351808 CBSP35520 551 aa12.53□□□□□ -0.4
IFT88-202ENST00000351808 PTGFRP43088 359 aa12.53□□□□□ -0.4
IFT88-202ENST00000351808 XCR1P46094 333 aa12.53□□□□□ -0.4
IFT88-202ENST00000351808 XKP51811 444 aa12.53□□□□□ -0.4
IFT88-202ENST00000351808 SOX4Q06945 474 aaPredicted RBP12.53□□□□□ -0.4
IFT88-202ENST00000351808 MAP4K2Q12851 820 aa12.53□□□□□ -0.4
IFT88-202ENST00000351808 UAP1L1Q3KQV9 507 aa12.53□□□□□ -0.4
IFT88-202ENST00000351808 AFMIDQ63HM1 303 aa12.53□□□□□ -0.4
IFT88-202ENST00000351808 ELP2Q6IA86 826 aa12.53□□□□□ -0.4
IFT88-202ENST00000351808 ZNF613Q6PF04 617 aa12.53□□□□□ -0.4
IFT88-202ENST00000351808 SEZ6L2Q6UXD5 910 aa12.53□□□□□ -0.4
IFT88-202ENST00000351808 OAFQ86UD1 273 aa12.53□□□□□ -0.4
IFT88-202ENST00000351808 C12orf40Q86WS4 652 aa12.53□□□□□ -0.4
IFT88-202ENST00000351808 PUSL1Q8N0Z8 303 aaKnown RBP12.53□□□□□ -0.4
IFT88-202ENST00000351808 RTL3Q8N8U3 475 aaKnown RBP12.53□□□□□ -0.4
IFT88-202ENST00000351808 BOLLQ8N9W6 283 aaKnown RBP12.53□□□□□ -0.4
IFT88-202ENST00000351808 ADAMTS19Q8TE59 1207 aa12.53□□□□□ -0.4
IFT88-202ENST00000351808 KLRG1Q96E93 195 aa12.53□□□□□ -0.4
IFT88-202ENST00000351808 CHST8Q9H2A9 424 aa12.53□□□□□ -0.4
IFT88-202ENST00000351808 EPHA6Q9UF33 1036 aa12.53□□□□□ -0.4
IFT88-202ENST00000351808 TESQ9UGI8 421 aaKnown RBP12.53□□□□□ -0.4
IFT88-202ENST00000351808 CLEC4AQ9UMR7 237 aa12.53□□□□□ -0.4
IFT88-202ENST00000351808 LHX6Q9UPM6 363 aa12.53□□□□□ -0.4
IFT88-202ENST00000351808 CHD5Q8TDI0 1954 aa12.53□□□□□ -0.4
IFT88-202ENST00000351808 TRBV4-1A0A0J9YWV2 114 aa12.53□□□□□ -0.4
IFT88-202ENST00000351808 OR6C68A6NDL8 312 aa12.53□□□□□ -0.4
IFT88-202ENST00000351808 AGAP14A8MT82 685 aa12.53□□□□□ -0.4
IFT88-202ENST00000351808 DISC1C4P0D8 188 aa12.53□□□□□ -0.4
IFT88-202ENST00000351808 RFXAPO00287 272 aa12.53□□□□□ -0.4
IFT88-202ENST00000351808 SOX30O94993 753 aa12.53□□□□□ -0.4
IFT88-202ENST00000351808 SPDEFO95238 335 aa12.53□□□□□ -0.4
IFT88-202ENST00000351808 ARIH2O95376 493 aa12.53□□□□□ -0.4
IFT88-202ENST00000351808 IGFBP6P24592 240 aaPredicted RBP12.53□□□□□ -0.4
IFT88-202ENST00000351808 S100PP25815 95 aa12.53□□□□□ -0.4
IFT88-202ENST00000351808 PCGF2P35227 344 aa12.53□□□□□ -0.4
IFT88-202ENST00000351808 RFX3P48380 749 aa12.53□□□□□ -0.4
IFT88-202ENST00000351808 RGS4P49798 205 aa12.53□□□□□ -0.4
IFT88-202ENST00000351808 HMGA2P52926 109 aa12.53□□□□□ -0.4
IFT88-202ENST00000351808 MTAPQ13126 283 aa12.53□□□□□ -0.4
IFT88-202ENST00000351808 MBTPS1Q14703 1052 aa12.53□□□□□ -0.4
IFT88-202ENST00000351808 MICBQ29980 383 aa12.53□□□□□ -0.4
IFT88-202ENST00000351808 WSCD1Q658N2 575 aa12.53□□□□□ -0.4
IFT88-202ENST00000351808 SLC6A19Q695T7 634 aa12.53□□□□□ -0.4
IFT88-202ENST00000351808 SFRP4Q6FHJ7 346 aaPredicted RBP12.53□□□□□ -0.4
IFT88-202ENST00000351808 ZNF770Q6IQ21 691 aaPredicted RBP12.53□□□□□ -0.4
IFT88-202ENST00000351808 LHFPL3Q86UP9 236 aa12.53□□□□□ -0.4
IFT88-202ENST00000351808 ARIH2OSQ8N7S6 290 aa12.53□□□□□ -0.4
IFT88-202ENST00000351808 CAMKVQ8NCB2 501 aa12.53□□□□□ -0.4
IFT88-202ENST00000351808 ZFP3Q96NJ6 502 aa12.53□□□□□ -0.4
IFT88-202ENST00000351808 TSNAXQ99598 290 aaKnown RBP12.53□□□□□ -0.4
IFT88-202ENST00000351808 ANKRD19PQ9H560 264 aa12.53□□□□□ -0.4
IFT88-202ENST00000351808 CA5BQ9Y2D0 317 aa12.53□□□□□ -0.4
IFT88-202ENST00000351808 GPR39O43194 453 aa12.52□□□□□ -0.4
IFT88-202ENST00000351808 PEX10O60683 326 aa12.52□□□□□ -0.4
IFT88-202ENST00000351808 IGHV2-70P01814 119 aa12.52□□□□□ -0.4
IFT88-202ENST00000351808 FGF1P05230 155 aa12.52□□□□□ -0.4
IFT88-202ENST00000351808 RD3LP0DJH9 198 aa12.52□□□□□ -0.4
IFT88-202ENST00000351808 LAMP1P11279 417 aa12.52□□□□□ -0.4
IFT88-202ENST00000351808 RORAP35398 523 aa12.52□□□□□ -0.4
IFT88-202ENST00000351808 CRATP43155 626 aa12.52□□□□□ -0.4
IFT88-202ENST00000351808 FNTBP49356 437 aa12.52□□□□□ -0.4
IFT88-202ENST00000351808 CCL23P55773 120 aa12.52□□□□□ -0.4
IFT88-202ENST00000351808 WDR5P61964 334 aaKnown RBP12.52□□□□□ -0.4
IFT88-202ENST00000351808 DGCR2P98153 550 aa12.52□□□□□ -0.4
IFT88-202ENST00000351808 ILKQ13418 452 aa12.52□□□□□ -0.4
IFT88-202ENST00000351808 ARTNQ5T4W7 220 aa12.52□□□□□ -0.4
IFT88-202ENST00000351808 C12orf73Q69YU5 71 aa12.52□□□□□ -0.4
IFT88-202ENST00000351808 ZNF660Q6AZW8 331 aaPredicted RBP12.52□□□□□ -0.4
IFT88-202ENST00000351808 GSG1LQ6UXU4 331 aa12.52□□□□□ -0.4
IFT88-202ENST00000351808 KRT78Q8N1N4 520 aa12.52□□□□□ -0.4
IFT88-202ENST00000351808 RNF175Q8N4F7 328 aa12.52□□□□□ -0.4
IFT88-202ENST00000351808 PXT1Q8NFP0 134 aa12.52□□□□□ -0.4
IFT88-202ENST00000351808 WNT2BQ93097 391 aa12.52□□□□□ -0.4
IFT88-202ENST00000351808 PEX11GQ96HA9 241 aa12.52□□□□□ -0.4
IFT88-202ENST00000351808 LRR1Q96L50 414 aa12.52□□□□□ -0.4
IFT88-202ENST00000351808 PKP4Q99569 1192 aa12.52□□□□□ -0.4
IFT88-202ENST00000351808 C20orf85Q9H1P6 137 aa12.52□□□□□ -0.4
IFT88-202ENST00000351808 DDX31Q9H8H2 851 aaKnown RBP12.52□□□□□ -0.4
IFT88-202ENST00000351808 CRTAC1Q9NQ79 661 aa12.52□□□□□ -0.4
IFT88-202ENST00000351808 TEX10Q9NXF1 929 aaPredicted RBP12.52□□□□□ -0.4
IFT88-202ENST00000351808 NFKBIL1Q9UBC1 381 aaPredicted RBP12.52□□□□□ -0.4
IFT88-202ENST00000351808 ACSL6Q9UKU0 697 aa12.52□□□□□ -0.4
IFT88-202ENST00000351808 MKL2Q9ULH7 1088 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms