RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3A, Length 2,235 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 KDM1AO60341 852 aa20.81■□□□□ 0.92
UPF3A-201ENST00000351487 TPST2O60704 377 aa20.81■□□□□ 0.92
UPF3A-201ENST00000351487 HBQ1P09105 142 aa20.81■□□□□ 0.92
UPF3A-201ENST00000351487 ACADMP11310 421 aa20.81■□□□□ 0.92
UPF3A-201ENST00000351487 CD300CQ08708 224 aa20.81■□□□□ 0.92
UPF3A-201ENST00000351487 MLLT11Q13015 90 aaPredicted RBP20.81■□□□□ 0.92
UPF3A-201ENST00000351487 GPAT3Q53EU6 434 aa20.81■□□□□ 0.92
UPF3A-201ENST00000351487 BCDIN3DQ7Z5W3 292 aaKnown RBP20.81■□□□□ 0.92
UPF3A-201ENST00000351487 TMEM145Q8NBT3 493 aa20.81■□□□□ 0.92
UPF3A-201ENST00000351487 ZNF784Q8NCA9 323 aaPredicted RBP20.81■□□□□ 0.92
UPF3A-201ENST00000351487 OR7D2Q96RA2 312 aa20.81■□□□□ 0.92
UPF3A-201ENST00000351487 APOOQ9BUR5 198 aa20.81■□□□□ 0.92
UPF3A-201ENST00000351487 NUAK2Q9H093 628 aa20.81■□□□□ 0.92
UPF3A-201ENST00000351487 SIAEQ9HAT2 523 aa20.81■□□□□ 0.92
UPF3A-201ENST00000351487 APOBEC3BQ9UH17 382 aaKnown RBP20.81■□□□□ 0.92
UPF3A-201ENST00000351487 MOSPD1Q9UJG1 213 aa20.81■□□□□ 0.92
UPF3A-201ENST00000351487 HEBP2Q9Y5Z4 205 aa20.81■□□□□ 0.92
UPF3A-201ENST00000351487 MN1Q10571 1320 aaPredicted RBP20.81■□□□□ 0.92
UPF3A-201ENST00000351487 PROM1O43490 865 aa20.81■□□□□ 0.92
UPF3A-201ENST00000351487 TLX2O43763 284 aaPredicted RBP20.81■□□□□ 0.92
UPF3A-201ENST00000351487 KIR2DL1P43626 348 aaPredicted RBP20.81■□□□□ 0.92
UPF3A-201ENST00000351487 SFSWAPQ12872 951 aaKnown RBP20.81■□□□□ 0.92
UPF3A-201ENST00000351487 GINS1Q14691 196 aa20.81■□□□□ 0.92
UPF3A-201ENST00000351487 FAM109BQ6ICB4 259 aaPredicted RBP20.81■□□□□ 0.92
UPF3A-201ENST00000351487 FAM83FQ8NEG4 500 aaPredicted RBP20.81■□□□□ 0.92
UPF3A-201ENST00000351487 C16orf58Q96GQ5 468 aa20.81■□□□□ 0.92
UPF3A-201ENST00000351487 ZNF681Q96N22 645 aa20.81■□□□□ 0.92
UPF3A-201ENST00000351487 ARHGDIGQ99819 225 aa20.81■□□□□ 0.92
UPF3A-201ENST00000351487 SLC38A1Q9H2H9 487 aa20.81■□□□□ 0.92
UPF3A-201ENST00000351487 GIMAP4Q9NUV9 329 aa20.81■□□□□ 0.92
UPF3A-201ENST00000351487 CRNNQ9UBG3 495 aaPredicted RBP20.81■□□□□ 0.92
UPF3A-201ENST00000351487 TESQ9UGI8 421 aaKnown RBP20.81■□□□□ 0.92
UPF3A-201ENST00000351487 PCDHGB6Q9Y5F9 930 aa20.81■□□□□ 0.92
UPF3A-201ENST00000351487 KCNE3Q9Y6H6 103 aa20.81■□□□□ 0.92
UPF3A-201ENST00000351487 A0A1W2PS29 197 aa20.8■□□□□ 0.92
UPF3A-201ENST00000351487 PSMA1P25786 263 aaKnown RBP20.8■□□□□ 0.92
UPF3A-201ENST00000351487 MPIP34949 423 aa20.8■□□□□ 0.92
UPF3A-201ENST00000351487 STXBP1P61764 594 aaKnown RBP20.8■□□□□ 0.92
UPF3A-201ENST00000351487 LSM11P83369 360 aaKnown RBP eCLIP20.8■□□□□ 0.92
UPF3A-201ENST00000351487 C1DQ13901 141 aaKnown RBP20.8■□□□□ 0.92
UPF3A-201ENST00000351487 ITPRIPL2Q3MIP1 535 aa20.8■□□□□ 0.92
UPF3A-201ENST00000351487 SPANXN2Q5MJ10 180 aa20.8■□□□□ 0.92
UPF3A-201ENST00000351487 HMGN2P46Q86SG4 172 aa20.8■□□□□ 0.92
UPF3A-201ENST00000351487 GJD3Q8N144 294 aa20.8■□□□□ 0.92
UPF3A-201ENST00000351487 POC5Q8NA72 575 aa20.8■□□□□ 0.92
UPF3A-201ENST00000351487 OR14C36Q8NHC7 312 aa20.8■□□□□ 0.92
UPF3A-201ENST00000351487 MKRN2Q9H000 416 aaKnown RBP20.8■□□□□ 0.92
UPF3A-201ENST00000351487 C3orf14Q9HBI5 128 aa20.8■□□□□ 0.92
UPF3A-201ENST00000351487 STUB1Q9UNE7 303 aa20.8■□□□□ 0.92
UPF3A-201ENST00000351487 SNX7Q9UNH6 387 aa20.8■□□□□ 0.92
UPF3A-201ENST00000351487 MYL12BO14950 172 aa20.8■□□□□ 0.92
UPF3A-201ENST00000351487 RNGTTO60942 597 aaKnown RBP20.8■□□□□ 0.92
UPF3A-201ENST00000351487 C8orf89P0DMQ9 161 aa20.8■□□□□ 0.92
UPF3A-201ENST00000351487 CRYBB2P43320 205 aa20.8■□□□□ 0.92
UPF3A-201ENST00000351487 SMSP52788 366 aa20.8■□□□□ 0.92
UPF3A-201ENST00000351487 ACSM5Q6NUN0 579 aa20.8■□□□□ 0.92
UPF3A-201ENST00000351487 MRGPREQ86SM8 312 aa20.8■□□□□ 0.92
UPF3A-201ENST00000351487 ELP4Q96EB1 424 aa20.8■□□□□ 0.92
UPF3A-201ENST00000351487 ZNF582Q96NG8 517 aaPredicted RBP20.8■□□□□ 0.92
UPF3A-201ENST00000351487 KXD1Q9BQD3 176 aa20.8■□□□□ 0.92
UPF3A-201ENST00000351487 ASPNQ9BXN1 380 aa20.8■□□□□ 0.92
UPF3A-201ENST00000351487 LYARQ9NX58 379 aaKnown RBP20.8■□□□□ 0.92
UPF3A-201ENST00000351487 CALML5Q9NZT1 146 aa20.8■□□□□ 0.92
UPF3A-201ENST00000351487 LIPT1Q9Y234 373 aa20.8■□□□□ 0.92
UPF3A-201ENST00000351487 ATG2BQ96BY7 2078 aa20.79■□□□□ 0.92
UPF3A-201ENST00000351487 RAB36O95755 333 aa20.79■□□□□ 0.92
UPF3A-201ENST00000351487 DNTTP04053 509 aa20.79■□□□□ 0.92
UPF3A-201ENST00000351487 MC3RP41968 323 aa20.79■□□□□ 0.92
UPF3A-201ENST00000351487 SEPHS1P49903 392 aa20.79■□□□□ 0.92
UPF3A-201ENST00000351487 RAB8AP61006 207 aa20.79■□□□□ 0.92
UPF3A-201ENST00000351487 CACTIN-AS1Q8N1I8 211 aa20.79■□□□□ 0.92
UPF3A-201ENST00000351487 OR52I1Q8NGK6 324 aa20.79■□□□□ 0.92
UPF3A-201ENST00000351487 GANCQ8TET4 914 aa20.79■□□□□ 0.92
UPF3A-201ENST00000351487 ITFG2Q969R8 447 aa20.79■□□□□ 0.92
UPF3A-201ENST00000351487 LRR1Q96L50 414 aa20.79■□□□□ 0.92
UPF3A-201ENST00000351487 POLR2J2Q9GZM3 115 aaKnown RBP20.79■□□□□ 0.92
UPF3A-201ENST00000351487 QRSL1Q9H0R6 528 aaKnown RBP20.79■□□□□ 0.92
UPF3A-201ENST00000351487 FGF22Q9HCT0 170 aa20.79■□□□□ 0.92
UPF3A-201ENST00000351487 MRPS18AQ9NVS2 196 aaKnown RBP20.79■□□□□ 0.92
UPF3A-201ENST00000351487 OR6C2Q9NZP2 312 aa20.79■□□□□ 0.92
UPF3A-201ENST00000351487 ANKMY1Q9P2S6 941 aa20.79■□□□□ 0.92
UPF3A-201ENST00000351487 COLEC10Q9Y6Z7 277 aa20.79■□□□□ 0.92
UPF3A-201ENST00000351487 A0A087WUU8 490 aa20.78■□□□□ 0.92
UPF3A-201ENST00000351487 HYKKA2RU49 373 aa20.78■□□□□ 0.92
UPF3A-201ENST00000351487 LOC110117498-PIK3R3F6TDL0 507 aa20.78■□□□□ 0.92
UPF3A-201ENST00000351487 ASGR2P07307 311 aa20.78■□□□□ 0.92
UPF3A-201ENST00000351487 GTF2E2P29084 291 aaKnown RBP20.78■□□□□ 0.92
UPF3A-201ENST00000351487 GDI1P31150 447 aa20.78■□□□□ 0.92
UPF3A-201ENST00000351487 TIE1P35590 1138 aa20.78■□□□□ 0.92
UPF3A-201ENST00000351487 ADPRHP54922 357 aa20.78■□□□□ 0.92
UPF3A-201ENST00000351487 KIF18BQ86Y91 864 aa20.78■□□□□ 0.92
UPF3A-201ENST00000351487 C7orf61Q8IZ16 206 aa20.78■□□□□ 0.92
UPF3A-201ENST00000351487 NUP43Q8NFH3 380 aa20.78■□□□□ 0.92
UPF3A-201ENST00000351487 OR9A2Q8NGT5 310 aa20.78■□□□□ 0.92
UPF3A-201ENST00000351487 PIK3R3Q92569 461 aa20.78■□□□□ 0.92
UPF3A-201ENST00000351487 EXOSC4Q9NPD3 245 aaKnown RBP20.78■□□□□ 0.92
UPF3A-201ENST00000351487 TRANK1O15050 2925 aa20.78■□□□□ 0.92
UPF3A-201ENST00000351487 ZNF670-ZNF695F2Z2N8 137 aa20.78■□□□□ 0.92
UPF3A-201ENST00000351487 K7EQS6 105 aa20.78■□□□□ 0.92
UPF3A-201ENST00000351487 ALPPP05187 535 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 168.5 ms