RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 CT62P0C5K7 136 aa20.06■□□□□ 0.8
TSPAN3-202ENST00000346495 FBLP22087 321 aaKnown RBP20.06■□□□□ 0.8
TSPAN3-202ENST00000346495 OR1D4P47884 311 aa20.06■□□□□ 0.8
TSPAN3-202ENST00000346495 BTG2P78543 158 aa20.06■□□□□ 0.8
TSPAN3-202ENST00000346495 OTUD3Q5T2D3 398 aaPredicted RBP20.06■□□□□ 0.8
TSPAN3-202ENST00000346495 C6orf52Q5T4I8 152 aa20.06■□□□□ 0.8
TSPAN3-202ENST00000346495 HEPHL1Q6MZM0 1159 aa20.06■□□□□ 0.8
TSPAN3-202ENST00000346495 TBPL2Q6SJ96 375 aa20.06■□□□□ 0.8
TSPAN3-202ENST00000346495 PRR23CQ6ZRP0 262 aa20.06■□□□□ 0.8
TSPAN3-202ENST00000346495 GALNT12Q8IXK2 581 aa20.06■□□□□ 0.8
TSPAN3-202ENST00000346495 CDRT4Q8N9R6 151 aa20.06■□□□□ 0.8
TSPAN3-202ENST00000346495 MAGEE2Q8TD90 523 aaPredicted RBP20.06■□□□□ 0.8
TSPAN3-202ENST00000346495 CXorf21Q9HAI6 301 aa20.06■□□□□ 0.8
TSPAN3-202ENST00000346495 IFT80Q9P2H3 777 aaPredicted RBP20.06■□□□□ 0.8
TSPAN3-202ENST00000346495 SEC14L3Q9UDX4 400 aa20.06■□□□□ 0.8
TSPAN3-202ENST00000346495 LAMA1P25391 3075 aa20.06■□□□□ 0.8
TSPAN3-202ENST00000346495 LDOC1O95751 146 aaPredicted RBP20.05■□□□□ 0.8
TSPAN3-202ENST00000346495 ALOX5P09917 674 aa20.05■□□□□ 0.8
TSPAN3-202ENST00000346495 STT3AP46977 705 aa20.05■□□□□ 0.8
TSPAN3-202ENST00000346495 KCNJ5P48544 419 aa20.05■□□□□ 0.8
TSPAN3-202ENST00000346495 ALDH3A2P51648 485 aa20.05■□□□□ 0.8
TSPAN3-202ENST00000346495 ARHGDIAP52565 204 aa20.05■□□□□ 0.8
TSPAN3-202ENST00000346495 IST1P53990 364 aa20.05■□□□□ 0.8
TSPAN3-202ENST00000346495 DUSP7Q16829 419 aa20.05■□□□□ 0.8
TSPAN3-202ENST00000346495 EXOSC6Q5RKV6 272 aaKnown RBP20.05■□□□□ 0.8
TSPAN3-202ENST00000346495 PRAMEF17Q5VTA0 474 aa20.05■□□□□ 0.8
TSPAN3-202ENST00000346495 SHQ1Q6PI26 577 aaKnown RBP20.05■□□□□ 0.8
TSPAN3-202ENST00000346495 DBX2Q6ZNG2 339 aa20.05■□□□□ 0.8
TSPAN3-202ENST00000346495 SLC16A11Q8NCK7 471 aa20.05■□□□□ 0.8
TSPAN3-202ENST00000346495 RCBTB1Q8NDN9 531 aa20.05■□□□□ 0.8
TSPAN3-202ENST00000346495 SIMC1Q8NDZ2 872 aa20.05■□□□□ 0.8
TSPAN3-202ENST00000346495 C7orf57Q8NEG2 295 aa20.05■□□□□ 0.8
TSPAN3-202ENST00000346495 DOK4Q8TEW6 326 aa20.05■□□□□ 0.8
TSPAN3-202ENST00000346495 SLC9A6Q92581 669 aa20.05■□□□□ 0.8
TSPAN3-202ENST00000346495 PROX1Q92786 737 aa20.05■□□□□ 0.8
TSPAN3-202ENST00000346495 RIT1Q92963 219 aa20.05■□□□□ 0.8
TSPAN3-202ENST00000346495 CNDP2Q96KP4 475 aaKnown RBP20.05■□□□□ 0.8
TSPAN3-202ENST00000346495 NR1H4Q96RI1 486 aaPredicted RBP20.05■□□□□ 0.8
TSPAN3-202ENST00000346495 PIGUQ9H490 435 aa20.05■□□□□ 0.8
TSPAN3-202ENST00000346495 REEP1Q9H902 201 aa20.05■□□□□ 0.8
TSPAN3-202ENST00000346495 NDUFAF4Q9P032 175 aa20.05■□□□□ 0.8
TSPAN3-202ENST00000346495 CLDN16Q9Y5I7 305 aa20.05■□□□□ 0.8
TSPAN3-202ENST00000346495 USP34Q70CQ2 3546 aa20.05■□□□□ 0.8
TSPAN3-202ENST00000346495 BDP1A6H8Y1 2624 aa20.05■□□□□ 0.8
TSPAN3-202ENST00000346495 DIRAS1O95057 198 aa20.05■□□□□ 0.8
TSPAN3-202ENST00000346495 H6PDO95479 791 aa20.05■□□□□ 0.8
TSPAN3-202ENST00000346495 FESP07332 822 aa20.05■□□□□ 0.8
TSPAN3-202ENST00000346495 ACP2P11117 423 aa20.05■□□□□ 0.8
TSPAN3-202ENST00000346495 TNFRSF1BP20333 461 aa20.05■□□□□ 0.8
TSPAN3-202ENST00000346495 DNAJA1P31689 397 aaKnown RBP20.05■□□□□ 0.8
TSPAN3-202ENST00000346495 GALNSP34059 522 aa20.05■□□□□ 0.8
TSPAN3-202ENST00000346495 NUBP1P53384 320 aa20.05■□□□□ 0.8
TSPAN3-202ENST00000346495 HPCAP84074 193 aa20.05■□□□□ 0.8
TSPAN3-202ENST00000346495 KCNC4Q03721 635 aa20.05■□□□□ 0.8
TSPAN3-202ENST00000346495 NHSL2Q5HYW2 709 aa20.05■□□□□ 0.8
TSPAN3-202ENST00000346495 DGAT2L6Q6ZPD8 337 aa20.05■□□□□ 0.8
TSPAN3-202ENST00000346495 MARVELD2Q8N4S9 558 aa20.05■□□□□ 0.8
TSPAN3-202ENST00000346495 ZDHHC19Q8WVZ1 309 aaPredicted RBP20.05■□□□□ 0.8
TSPAN3-202ENST00000346495 CDS1Q92903 461 aa20.05■□□□□ 0.8
TSPAN3-202ENST00000346495 NRBF2Q96F24 287 aa20.05■□□□□ 0.8
TSPAN3-202ENST00000346495 ZNF578Q96N58 590 aaPredicted RBP20.05■□□□□ 0.8
TSPAN3-202ENST00000346495 OR6C1Q96RD1 312 aa20.05■□□□□ 0.8
TSPAN3-202ENST00000346495 ZNF300Q96RE9 604 aaPredicted RBP20.05■□□□□ 0.8
TSPAN3-202ENST00000346495 STACQ99469 402 aa20.05■□□□□ 0.8
TSPAN3-202ENST00000346495 SLC7A5P2Q9GIP4 190 aa20.05■□□□□ 0.8
TSPAN3-202ENST00000346495 LANCL2Q9NS86 450 aa20.05■□□□□ 0.8
TSPAN3-202ENST00000346495 SMPD3Q9NY59 655 aaPredicted RBP20.05■□□□□ 0.8
TSPAN3-202ENST00000346495 VNN3Q9NY84 501 aa20.05■□□□□ 0.8
TSPAN3-202ENST00000346495 USE1Q9NZ43 259 aa20.05■□□□□ 0.8
TSPAN3-202ENST00000346495 SH3GLB1Q9Y371 365 aa20.05■□□□□ 0.8
TSPAN3-202ENST00000346495 PCDHGB3Q9Y5G1 929 aa20.05■□□□□ 0.8
TSPAN3-202ENST00000346495 NUP210LQ5VU65 1888 aa20.05■□□□□ 0.8
TSPAN3-202ENST00000346495 NTN3O00634 580 aaPredicted RBP20.04■□□□□ 0.8
TSPAN3-202ENST00000346495 DLGAP1O14490 977 aa20.04■□□□□ 0.8
TSPAN3-202ENST00000346495 FLRT2O43155 660 aa20.04■□□□□ 0.8
TSPAN3-202ENST00000346495 SOX30O94993 753 aa20.04■□□□□ 0.8
TSPAN3-202ENST00000346495 CBX7O95931 251 aa20.04■□□□□ 0.8
TSPAN3-202ENST00000346495 MAOAP21397 527 aa20.04■□□□□ 0.8
TSPAN3-202ENST00000346495 FPR1P21462 350 aa20.04■□□□□ 0.8
TSPAN3-202ENST00000346495 OR1E2P47887 323 aa20.04■□□□□ 0.8
TSPAN3-202ENST00000346495 EXOSC7Q15024 291 aaKnown RBP20.04■□□□□ 0.8
TSPAN3-202ENST00000346495 DUSP5Q16690 384 aa20.04■□□□□ 0.8
TSPAN3-202ENST00000346495 ARHGAP11BQ3KRB8 267 aa20.04■□□□□ 0.8
TSPAN3-202ENST00000346495 LAIR1Q6GTX8 287 aa20.04■□□□□ 0.8
TSPAN3-202ENST00000346495 WDR53Q7Z5U6 358 aaPredicted RBP20.04■□□□□ 0.8
TSPAN3-202ENST00000346495 TSEN54Q7Z6J9 526 aaKnown RBP20.04■□□□□ 0.8
TSPAN3-202ENST00000346495 TMEM179BQ7Z7N9 219 aa20.04■□□□□ 0.8
TSPAN3-202ENST00000346495 GPR32P1Q8NGA4 272 aa20.04■□□□□ 0.8
TSPAN3-202ENST00000346495 ZNF354BQ96LW1 612 aa20.04■□□□□ 0.8
TSPAN3-202ENST00000346495 RBM4BQ9BQ04 359 aaKnown RBP20.04■□□□□ 0.8
TSPAN3-202ENST00000346495 RBM4Q9BWF3 364 aaKnown RBP20.04■□□□□ 0.8
TSPAN3-202ENST00000346495 NECTIN3Q9NQS3 549 aa20.04■□□□□ 0.8
TSPAN3-202ENST00000346495 DUSP22Q9NRW4 184 aa20.04■□□□□ 0.8
TSPAN3-202ENST00000346495 RARRES3Q9UL19 164 aa20.04■□□□□ 0.8
TSPAN3-202ENST00000346495 U3KQV3 271 aa20.04■□□□□ 0.8
TSPAN3-202ENST00000346495 FAM86C2PA6NEL3 165 aa20.03■□□□□ 0.8
TSPAN3-202ENST00000346495 ADAMDEC1O15204 470 aa20.03■□□□□ 0.8
TSPAN3-202ENST00000346495 NME6O75414 186 aaPredicted RBP20.03■□□□□ 0.8
TSPAN3-202ENST00000346495 JRKO75564 520 aa20.03■□□□□ 0.8
TSPAN3-202ENST00000346495 IFNW1P05000 195 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms