RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 PJA1Q8NG27 643 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 OR5D16Q8NGK9 328 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 SLC38A5Q8WUX1 472 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 OTUB1Q96FW1 271 aaPredicted RBP8.68□□□□□ -1.02
ATG4A-202ENST00000345734 CSF3RQ99062 836 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 NELL2Q99435 816 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 RBM4BQ9BQ04 359 aaKnown RBP8.68□□□□□ -1.02
ATG4A-202ENST00000345734 ZFYVE21Q9BQ24 234 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 RBM4Q9BWF3 364 aaKnown RBP8.68□□□□□ -1.02
ATG4A-202ENST00000345734 WNT10AQ9GZT5 417 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 CD320Q9NPF0 282 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 LYARQ9NX58 379 aaKnown RBP8.68□□□□□ -1.02
ATG4A-202ENST00000345734 TMEFF2Q9UIK5 374 aaPredicted RBP8.68□□□□□ -1.02
ATG4A-202ENST00000345734 RAB23Q9ULC3 237 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 ANGPT4Q9Y264 503 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 KLK4Q9Y5K2 254 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 SMIM31A0A1B0GVY4 71 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 MITFO75030 526 aaPredicted RBP8.68□□□□□ -1.02
ATG4A-202ENST00000345734 BCHEP06276 602 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 TFPTP0C1Z6 253 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 OR12D1P0DN82 309 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 NR2F6P10588 404 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 PIGAP37287 484 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 YAP1P46937 504 aaKnown RBP8.68□□□□□ -1.02
ATG4A-202ENST00000345734 PRKAG1P54619 331 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 ITGA1P56199 1179 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 DMWDQ09019 674 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 APOFQ13790 326 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 RUNX2Q13950 521 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 CRB2Q5IJ48 1285 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 REEP3Q6NUK4 255 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 TMEM107Q6UX40 140 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 OLIG3Q7RTU3 272 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 OOSP2Q86WS3 158 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 HIPK1Q86Z02 1210 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 DCP2Q8IU60 420 aaKnown RBP8.68□□□□□ -1.02
ATG4A-202ENST00000345734 ZNF786Q8N393 782 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 ARL14Q8N4G2 192 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 CAMKVQ8NCB2 501 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 CLDN23Q96B33 292 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 TBC1D20Q96BZ9 403 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 RMND5BQ96G75 393 aaPredicted RBP8.68□□□□□ -1.02
ATG4A-202ENST00000345734 TMEM19Q96HH6 336 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 SLC35G5Q96KT7 338 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 ZNF681Q96N22 645 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 FANCD2OSQ96PS1 177 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 YIPF4Q9BSR8 244 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 RSPO3Q9BXY4 272 aaPredicted RBP8.68□□□□□ -1.02
ATG4A-202ENST00000345734 AMBRA1Q9C0C7 1298 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 OR51I1Q9H343 314 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 ANKRA2Q9H9E1 313 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 A4GALTQ9NPC4 353 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 STARD5Q9NSY2 213 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 ZCCHC3Q9NUD5 404 aaKnown RBP8.68□□□□□ -1.02
ATG4A-202ENST00000345734 NDUFAF4Q9P032 175 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 KCMF1Q9P0J7 381 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 BAG5Q9UL15 447 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 ENTPD4Q9Y227 616 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 MYRFQ9Y2G1 1151 aa8.68□□□□□ -1.02
ATG4A-202ENST00000345734 SAMHD1Q9Y3Z3 626 aaKnown RBP8.68□□□□□ -1.02
ATG4A-202ENST00000345734 ARID1BQ8NFD5 2236 aaPredicted RBP8.67□□□□□ -1.02
ATG4A-202ENST00000345734 H0YAE9 185 aa8.67□□□□□ -1.02
ATG4A-202ENST00000345734 SDC3O75056 442 aa8.67□□□□□ -1.02
ATG4A-202ENST00000345734 NME6O75414 186 aaPredicted RBP8.67□□□□□ -1.02
ATG4A-202ENST00000345734 CLPTM1O96005 669 aa8.67□□□□□ -1.02
ATG4A-202ENST00000345734 TFAP2AP05549 437 aa8.67□□□□□ -1.02
ATG4A-202ENST00000345734 ST6GAL1P15907 406 aa8.67□□□□□ -1.02
ATG4A-202ENST00000345734 POLR2IP36954 125 aaKnown RBP8.67□□□□□ -1.02
ATG4A-202ENST00000345734 CSNK1EP49674 416 aaKnown RBP8.67□□□□□ -1.02
ATG4A-202ENST00000345734 CDH15P55291 814 aa8.67□□□□□ -1.02
ATG4A-202ENST00000345734 LIM2P55344 173 aa8.67□□□□□ -1.02
ATG4A-202ENST00000345734 ELOCQ15369 112 aa8.67□□□□□ -1.02
ATG4A-202ENST00000345734 LTB4RQ15722 352 aa8.67□□□□□ -1.02
ATG4A-202ENST00000345734 NDUFA5Q16718 116 aa8.67□□□□□ -1.02
ATG4A-202ENST00000345734 DEFB110Q30KQ9 67 aa8.67□□□□□ -1.02
ATG4A-202ENST00000345734 LIN52Q52LA3 116 aa8.67□□□□□ -1.02
ATG4A-202ENST00000345734 RNF44Q7L0R7 432 aa8.67□□□□□ -1.02
ATG4A-202ENST00000345734 GALNT5Q7Z7M9 940 aa8.67□□□□□ -1.02
ATG4A-202ENST00000345734 PATL1Q86TB9 770 aaKnown RBP8.67□□□□□ -1.02
ATG4A-202ENST00000345734 SATL1Q86VE3 508 aa8.67□□□□□ -1.02
ATG4A-202ENST00000345734 CYP4Z1Q86W10 505 aa8.67□□□□□ -1.02
ATG4A-202ENST00000345734 DEFB123Q8N688 67 aa8.67□□□□□ -1.02
ATG4A-202ENST00000345734 METTL25Q8N6Q8 603 aa8.67□□□□□ -1.02
ATG4A-202ENST00000345734 OR9A2Q8NGT5 310 aa8.67□□□□□ -1.02
ATG4A-202ENST00000345734 ZFP28Q8NHY6 868 aa8.67□□□□□ -1.02
ATG4A-202ENST00000345734 RERGQ96A58 199 aaPredicted RBP8.67□□□□□ -1.02
ATG4A-202ENST00000345734 C16orf58Q96GQ5 468 aa8.67□□□□□ -1.02
ATG4A-202ENST00000345734 C10orf90Q96M02 699 aa8.67□□□□□ -1.02
ATG4A-202ENST00000345734 MUS81Q96NY9 551 aa8.67□□□□□ -1.02
ATG4A-202ENST00000345734 SERINC2Q96SA4 455 aa8.67□□□□□ -1.02
ATG4A-202ENST00000345734 MRPS26Q9BYN8 205 aaKnown RBP8.67□□□□□ -1.02
ATG4A-202ENST00000345734 FAM60AQ9NP50 221 aa8.67□□□□□ -1.02
ATG4A-202ENST00000345734 FAM118AQ9NWS6 357 aa8.67□□□□□ -1.02
ATG4A-202ENST00000345734 PDP1Q9P0J1 537 aaPredicted RBP8.67□□□□□ -1.02
ATG4A-202ENST00000345734 IFT80Q9P2H3 777 aaPredicted RBP8.67□□□□□ -1.02
ATG4A-202ENST00000345734 TRPC4Q9UBN4 977 aa8.67□□□□□ -1.02
ATG4A-202ENST00000345734 ZMAT5Q9UDW3 170 aaKnown RBP8.67□□□□□ -1.02
ATG4A-202ENST00000345734 POMT2Q9UKY4 750 aa8.67□□□□□ -1.02
ATG4A-202ENST00000345734 PADI2Q9Y2J8 665 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms