RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 OR10K1Q8NGX5 313 aa11.54□□□□□ -0.56
COL12A1-202ENST00000345356 GAL3ST4Q96RP7 486 aa11.54□□□□□ -0.56
COL12A1-202ENST00000345356 PHB2Q99623 299 aa11.54□□□□□ -0.56
COL12A1-202ENST00000345356 KCNJ16Q9NPI9 418 aa11.54□□□□□ -0.56
COL12A1-202ENST00000345356 TMEM248Q9NWD8 314 aa11.54□□□□□ -0.56
COL12A1-202ENST00000345356 PARPBPQ9NWS1 579 aa11.54□□□□□ -0.56
COL12A1-202ENST00000345356 ZNF226Q9NYT6 803 aa11.54□□□□□ -0.56
COL12A1-202ENST00000345356 COLEC10Q9Y6Z7 277 aa11.54□□□□□ -0.56
COL12A1-202ENST00000345356 PPP6CO00743 305 aa11.54□□□□□ -0.56
COL12A1-202ENST00000345356 ARSAP15289 507 aa11.54□□□□□ -0.56
COL12A1-202ENST00000345356 ETV3P41162 512 aa11.54□□□□□ -0.56
COL12A1-202ENST00000345356 RGNQ15493 299 aa11.54□□□□□ -0.56
COL12A1-202ENST00000345356 PAPD4Q6PIY7 484 aaKnown RBP11.54□□□□□ -0.56
COL12A1-202ENST00000345356 LNX2Q8N448 690 aa11.54□□□□□ -0.56
COL12A1-202ENST00000345356 WDR20Q8TBZ3 569 aa11.54□□□□□ -0.56
COL12A1-202ENST00000345356 LCN9Q8WX39 176 aa11.54□□□□□ -0.56
COL12A1-202ENST00000345356 THAP4Q8WY91 577 aa11.54□□□□□ -0.56
COL12A1-202ENST00000345356 FAM46AQ96IP4 442 aaKnown RBP11.54□□□□□ -0.56
COL12A1-202ENST00000345356 HOXD1Q9GZZ0 328 aa11.54□□□□□ -0.56
COL12A1-202ENST00000345356 MAN2C1Q9NTJ4 1040 aa11.54□□□□□ -0.56
COL12A1-202ENST00000345356 CYP8B1Q9UNU6 501 aa11.54□□□□□ -0.56
COL12A1-202ENST00000345356 AK6Q9Y3D8 172 aaKnown RBP11.54□□□□□ -0.56
COL12A1-202ENST00000345356 KLK4Q9Y5K2 254 aa11.54□□□□□ -0.56
COL12A1-202ENST00000345356 SLIT2O94813 1529 aa11.54□□□□□ -0.56
COL12A1-202ENST00000345356 TRAV18A0A075B6X5 111 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 GLOD5A6NK44 160 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 ANHXE9PGG2 379 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 ZNF780AO75290 641 aaPredicted RBP11.53□□□□□ -0.56
COL12A1-202ENST00000345356 DCNP07585 359 aaKnown RBP11.53□□□□□ -0.56
COL12A1-202ENST00000345356 IDH3GP51553 393 aaPredicted RBP11.53□□□□□ -0.56
COL12A1-202ENST00000345356 DUSP28Q4G0W2 176 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 GRHL2Q6ISB3 625 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 NLGN2Q8NFZ4 835 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 ZFAND1Q8TCF1 268 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 MZB1Q8WU39 189 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 PCDHA9Q9Y5H5 950 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 RHPN2P1A8MT19 583 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 PEX10O60683 326 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 NCR1O76036 304 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 C1QBP02746 253 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 NFYAP23511 347 aaPredicted RBP11.53□□□□□ -0.56
COL12A1-202ENST00000345356 HSD11B1P28845 292 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 POU4F2Q12837 409 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 TCEAL6Q6IPX3 200 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 LYPD4Q6UWN0 246 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 PGAP1Q75T13 922 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 ZNF565Q8N9K5 539 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 ZBTB44Q8NCP5 570 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 OR5D16Q8NGK9 328 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 SPRYD4Q8WW59 207 aaPredicted RBP11.53□□□□□ -0.56
COL12A1-202ENST00000345356 MAP6Q96JE9 813 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 VRK1Q99986 396 aaPredicted RBP11.53□□□□□ -0.56
COL12A1-202ENST00000345356 ALG8Q9BVK2 526 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 PINK1Q9BXM7 581 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 HRH4Q9H3N8 390 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 SUV39H2Q9H5I1 410 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 GRHPRQ9UBQ7 328 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 MYH13Q9UKX3 1938 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 ANKRD28O15084 1053 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 MAFKO60675 156 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 MMP20O60882 483 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 SDC3O75056 442 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 RAB6AP20340 208 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 AK4P27144 223 aaPredicted RBP11.53□□□□□ -0.56
COL12A1-202ENST00000345356 ADARB1P78563 741 aaKnown RBP11.53□□□□□ -0.56
COL12A1-202ENST00000345356 BEX5Q5H9J7 111 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 PSAPL1Q6NUJ1 521 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 DPY19L2P1Q6NXN4 242 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 IL20RAQ9UHF4 553 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 RPS10-NUDT3A0A1W2PQS6 291 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 NDUFS4O43181 175 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 PRDX3P30048 256 aaKnown RBP11.53□□□□□ -0.56
COL12A1-202ENST00000345356 GRPRP30550 384 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 VIPR1P32241 457 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 LIPAP38571 399 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 RPS10P46783 165 aaKnown RBP11.53□□□□□ -0.56
COL12A1-202ENST00000345356 FLI1Q01543 452 aaPredicted RBP11.53□□□□□ -0.56
COL12A1-202ENST00000345356 KCNC3Q14003 757 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 IL20RBQ6UXL0 311 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 CHRDL2Q6WN34 429 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 ZNF546Q86UE3 836 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 NPWQ8N729 165 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 OR52N2Q8NGI0 321 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 OR56B4Q8NH76 319 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 CRB3Q9BUF7 120 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 ZNF223Q9UK11 482 aaPredicted RBP11.53□□□□□ -0.56
COL12A1-202ENST00000345356 A0A0A6YYH2 397 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 A6NJ64 397 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 CSTBP04080 98 aaKnown RBP11.53□□□□□ -0.56
COL12A1-202ENST00000345356 CD68P34810 354 aaPredicted RBP11.53□□□□□ -0.56
COL12A1-202ENST00000345356 IRF5Q13568 498 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 METAP1DQ6UB28 335 aaPredicted RBP11.53□□□□□ -0.56
COL12A1-202ENST00000345356 SUSD1Q6UWL2 747 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 AMZ2Q86W34 360 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 SERPINA12Q8IW75 414 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 ACVR1CQ8NER5 493 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 OR5W2Q8NH69 310 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 SLC38A1Q9H2H9 487 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 EMC7Q9NPA0 242 aa11.53□□□□□ -0.56
COL12A1-202ENST00000345356 SOWAHBA6NEL2 793 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms