RNA–Protein interactions for RNA: ENST00000344337.10

KPNA1-201, Transcript of karyopherin subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA1, Length 6,830 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-201ENST00000344337 PSKH2Q96QS6 385 aa7.42□□□□□ -1.22
KPNA1-201ENST00000344337 C1QTNF6Q9BXI9 259 aa7.42□□□□□ -1.22
KPNA1-201ENST00000344337 ALOXE3Q9BYJ1 711 aa7.42□□□□□ -1.22
KPNA1-201ENST00000344337 YTHDF1Q9BYJ9 559 aaKnown RBP7.42□□□□□ -1.22
KPNA1-201ENST00000344337 TMEM27Q9HBJ8 222 aa7.42□□□□□ -1.22
KPNA1-201ENST00000344337 FKBP14Q9NWM8 211 aa7.42□□□□□ -1.22
KPNA1-201ENST00000344337 OARD1Q9Y530 152 aa7.42□□□□□ -1.22
KPNA1-201ENST00000344337 TRAV27A0A087WT01 109 aa7.42□□□□□ -1.22
KPNA1-201ENST00000344337 WNT9AO14904 365 aa7.42□□□□□ -1.22
KPNA1-201ENST00000344337 GTF2F2P13984 249 aa7.42□□□□□ -1.22
KPNA1-201ENST00000344337 POLR2CP19387 275 aaPredicted RBP7.42□□□□□ -1.22
KPNA1-201ENST00000344337 RPS19P39019 145 aaKnown RBP7.42□□□□□ -1.22
KPNA1-201ENST00000344337 MAGEA2P43356 314 aa7.42□□□□□ -1.22
KPNA1-201ENST00000344337 SLC14A1Q13336 389 aa7.42□□□□□ -1.22
KPNA1-201ENST00000344337 GRK1Q15835 563 aa7.42□□□□□ -1.22
KPNA1-201ENST00000344337 DUSP7Q16829 419 aa7.42□□□□□ -1.22
KPNA1-201ENST00000344337 ZNF792Q3KQV3 632 aa7.42□□□□□ -1.22
KPNA1-201ENST00000344337 BRAT1Q6PJG6 821 aa7.42□□□□□ -1.22
KPNA1-201ENST00000344337 NUDT18Q6ZVK8 323 aa7.42□□□□□ -1.22
KPNA1-201ENST00000344337 KANSL1Q7Z3B3 1105 aa7.42□□□□□ -1.22
KPNA1-201ENST00000344337 ABI3BPQ7Z7G0 1075 aa7.42□□□□□ -1.22
KPNA1-201ENST00000344337 OXR1Q8N573 874 aa7.42□□□□□ -1.22
KPNA1-201ENST00000344337 RHOXF1Q8NHV9 184 aa7.42□□□□□ -1.22
KPNA1-201ENST00000344337 NPRL2Q8WTW4 380 aa7.42□□□□□ -1.22
KPNA1-201ENST00000344337 PIP5K1AQ99755 562 aa7.42□□□□□ -1.22
KPNA1-201ENST00000344337 NTN4Q9HB63 628 aa7.42□□□□□ -1.22
KPNA1-201ENST00000344337 TRBV2A0A0J9YWF9 115 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 ACADLP28330 430 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 MTNR1AP48039 350 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 PRR5P85299 388 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 ZNHIT3Q15649 155 aaPredicted RBP7.41□□□□□ -1.22
KPNA1-201ENST00000344337 XKR4Q5GH76 650 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 LYPLAL1Q5VWZ2 237 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 NXNL2Q5VZ03 156 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 CPZQ66K79 652 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 SHISA6Q6ZSJ9 500 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 TECPR1Q7Z6L1 1165 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.41□□□□□ -1.22
KPNA1-201ENST00000344337 OR4K5Q8NGD3 323 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 C11orf54Q9H0W9 315 aaPredicted RBP7.41□□□□□ -1.22
KPNA1-201ENST00000344337 ABCG4Q9H172 646 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 AP3M1Q9Y2T2 418 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 DOCK10Q96BY6 2186 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 H3BNC9 293 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 FABP7O15540 132 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 LDB3O75112 727 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 SFTPBP07988 381 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 PIM1P11309 404 aaPredicted RBP7.41□□□□□ -1.22
KPNA1-201ENST00000344337 HCAR3P49019 387 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 CTSCP53634 463 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 NKG7Q16617 165 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 UGT3A2Q3SY77 523 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 KCTD11Q693B1 232 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 VASNQ6EMK4 673 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 LRRTM4Q86VH4 590 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 OR5T1Q8NG75 326 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 TRMT10AQ8TBZ6 339 aaKnown RBP7.41□□□□□ -1.22
KPNA1-201ENST00000344337 RBM18Q96H35 190 aaKnown RBP7.41□□□□□ -1.22
KPNA1-201ENST00000344337 COQ10AQ96MF6 247 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 QRFPRQ96P65 431 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 TSGA13Q96PP4 275 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 DEC1Q9P2X7 70 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 CD300AQ9UGN4 299 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 OSGIN1Q9UJX0 560 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 RASD1Q9Y272 281 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 CIB4A0PJX0 185 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 OR6C75A6NL08 312 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 CHST10O43529 356 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 PPM1BO75688 479 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 PTHLHP12272 177 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 ACTR1BP42025 376 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 NRIP1P48552 1158 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 ACTR1AP61163 376 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 SP3Q02447 781 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 FOXM1Q08050 763 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 RGS1Q08116 209 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 SELENBP1Q13228 472 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 IKBIPQ70UQ0 350 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 PAQR7Q86WK9 346 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 SDR9C7Q8NEX9 313 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 RHEBL1Q8TAI7 183 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 OR8D1Q8WZ84 308 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 ZIC5Q96T25 663 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 MBOAT4Q96T53 435 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 SPATA9Q9BWV2 254 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.41□□□□□ -1.22
KPNA1-201ENST00000344337 PRDM16Q9HAZ2 1276 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 MAN2C1Q9NTJ4 1040 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 NDRG2Q9UN36 371 aaKnown RBP7.41□□□□□ -1.22
KPNA1-201ENST00000344337 SH2B3Q9UQQ2 575 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 WDR45Q9Y484 360 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 LYRM1O43325 122 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 MTHFD2P13995 350 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 SNRPBP14678 240 aaKnown RBP7.41□□□□□ -1.22
KPNA1-201ENST00000344337 AKR1C4P17516 323 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 FUT1P19526 365 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 FAM110CQ1W6H9 321 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 PNCKQ6P2M8 343 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 NCEH1Q6PIU2 408 aa7.41□□□□□ -1.22
KPNA1-201ENST00000344337 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms