RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 ERVK-21P61565 698 aa20.13■□□□□ 0.81
CCDC38-201ENST00000344280 TUBA3EQ6PEY2 450 aa20.13■□□□□ 0.81
CCDC38-201ENST00000344280 ZBTB8BQ8NAP8 495 aaPredicted RBP20.13■□□□□ 0.81
CCDC38-201ENST00000344280 OR4E2Q8NGC2 313 aa20.13■□□□□ 0.81
CCDC38-201ENST00000344280 KAT2AQ92830 837 aa20.13■□□□□ 0.81
CCDC38-201ENST00000344280 PRRC1Q96M27 445 aa20.13■□□□□ 0.81
CCDC38-201ENST00000344280 TRNT1Q96Q11 434 aaKnown RBP20.13■□□□□ 0.81
CCDC38-201ENST00000344280 EGLN3Q9H6Z9 239 aa20.13■□□□□ 0.81
CCDC38-201ENST00000344280 EXOSC4Q9NPD3 245 aaKnown RBP20.13■□□□□ 0.81
CCDC38-201ENST00000344280 GIN1Q9NXP7 522 aa20.13■□□□□ 0.81
CCDC38-201ENST00000344280 ENTPD4Q9Y227 616 aa20.13■□□□□ 0.81
CCDC38-201ENST00000344280 RPL36Q9Y3U8 105 aaKnown RBP20.13■□□□□ 0.81
CCDC38-201ENST00000344280 CHST2Q9Y4C5 530 aa20.13■□□□□ 0.81
CCDC38-201ENST00000344280 LINC01565O15544 149 aa20.13■□□□□ 0.81
CCDC38-201ENST00000344280 AHRP35869 848 aa20.13■□□□□ 0.81
CCDC38-201ENST00000344280 GIPRP48546 466 aa20.13■□□□□ 0.81
CCDC38-201ENST00000344280 PCYT1AP49585 367 aa20.13■□□□□ 0.81
CCDC38-201ENST00000344280 PPP2CBP62714 309 aa20.13■□□□□ 0.81
CCDC38-201ENST00000344280 PPP2CAP67775 309 aa20.13■□□□□ 0.81
CCDC38-201ENST00000344280 CHRNEQ04844 493 aa20.13■□□□□ 0.81
CCDC38-201ENST00000344280 PRKCDQ05655 676 aa20.13■□□□□ 0.81
CCDC38-201ENST00000344280 NCF4Q15080 339 aa20.13■□□□□ 0.81
CCDC38-201ENST00000344280 SYT14P1Q58G82 188 aa20.13■□□□□ 0.81
CCDC38-201ENST00000344280 C11orf74Q86VG3 221 aa20.13■□□□□ 0.81
CCDC38-201ENST00000344280 VRK2Q86Y07 508 aa20.13■□□□□ 0.81
CCDC38-201ENST00000344280 OR7D2Q96RA2 312 aa20.13■□□□□ 0.81
CCDC38-201ENST00000344280 INIPQ9NRY2 104 aa20.13■□□□□ 0.81
CCDC38-201ENST00000344280 TBC1D29Q9UFV1 150 aa20.13■□□□□ 0.81
CCDC38-201ENST00000344280 CA5BQ9Y2D0 317 aa20.13■□□□□ 0.81
CCDC38-201ENST00000344280 TBC1D3DA0A087WVF3 549 aa20.12■□□□□ 0.81
CCDC38-201ENST00000344280 TBC1D3IA0A087WXS9 549 aa20.12■□□□□ 0.81
CCDC38-201ENST00000344280 TBC1D3EA0A087X179 549 aa20.12■□□□□ 0.81
CCDC38-201ENST00000344280 TBC1D3KA0A087X1G2 549 aa20.12■□□□□ 0.81
CCDC38-201ENST00000344280 TBC1D3FA6NER0 549 aaPredicted RBP20.12■□□□□ 0.81
CCDC38-201ENST00000344280 POM121BA6NF01 834 aa20.12■□□□□ 0.81
CCDC38-201ENST00000344280 ISM1B1AKI9 464 aa20.12■□□□□ 0.81
CCDC38-201ENST00000344280 TBC1D3LB9A6J9 549 aa20.12■□□□□ 0.81
CCDC38-201ENST00000344280 PROM1O43490 865 aa20.12■□□□□ 0.81
CCDC38-201ENST00000344280 PLRG1O43660 514 aaKnown RBP20.12■□□□□ 0.81
CCDC38-201ENST00000344280 APOL3O95236 402 aa20.12■□□□□ 0.81
CCDC38-201ENST00000344280 ASGR2P07307 311 aa20.12■□□□□ 0.81
CCDC38-201ENST00000344280 FHP07954 510 aa20.12■□□□□ 0.81
CCDC38-201ENST00000344280 TBC1D3HP0C7X1 549 aa20.12■□□□□ 0.81
CCDC38-201ENST00000344280 AK4P27144 223 aaPredicted RBP20.12■□□□□ 0.81
CCDC38-201ENST00000344280 ADPRHP54922 357 aa20.12■□□□□ 0.81
CCDC38-201ENST00000344280 HOXC5Q00444 222 aa20.12■□□□□ 0.81
CCDC38-201ENST00000344280 MEDAGQ5VYS4 303 aa20.12■□□□□ 0.81
CCDC38-201ENST00000344280 TBC1D3GQ6DHY5 549 aa20.12■□□□□ 0.81
CCDC38-201ENST00000344280 TBC1D3CQ6IPX1 549 aa20.12■□□□□ 0.81
CCDC38-201ENST00000344280 C1orf94Q6P1W5 598 aa20.12■□□□□ 0.81
CCDC38-201ENST00000344280 TBC1D3Q8IZP1 549 aaPredicted RBP20.12■□□□□ 0.81
CCDC38-201ENST00000344280 POC5Q8NA72 575 aa20.12■□□□□ 0.81
CCDC38-201ENST00000344280 LRR1Q96L50 414 aa20.12■□□□□ 0.81
CCDC38-201ENST00000344280 SLC38A1Q9H2H9 487 aa20.12■□□□□ 0.81
CCDC38-201ENST00000344280 A0A087WUU8 490 aa20.11■□□□□ 0.81
CCDC38-201ENST00000344280 RFXAPO00287 272 aa20.11■□□□□ 0.81
CCDC38-201ENST00000344280 ZIC2O95409 532 aaPredicted RBP20.11■□□□□ 0.81
CCDC38-201ENST00000344280 SPNP16150 400 aa20.11■□□□□ 0.81
CCDC38-201ENST00000344280 RPS19P39019 145 aaKnown RBP20.11■□□□□ 0.81
CCDC38-201ENST00000344280 CLDN2P57739 230 aa20.11■□□□□ 0.81
CCDC38-201ENST00000344280 ALDH6A1Q02252 535 aaKnown RBP20.11■□□□□ 0.81
CCDC38-201ENST00000344280 OCLNQ16625 522 aa20.11■□□□□ 0.81
CCDC38-201ENST00000344280 ZNF181Q2M3W8 571 aa20.11■□□□□ 0.81
CCDC38-201ENST00000344280 TIMM50Q3ZCQ8 353 aa20.11■□□□□ 0.81
CCDC38-201ENST00000344280 ZNF425Q6IV72 752 aa20.11■□□□□ 0.81
CCDC38-201ENST00000344280 CD300LDQ6UXZ3 194 aa20.11■□□□□ 0.81
CCDC38-201ENST00000344280 NANOGP1Q8N7R0 232 aa20.11■□□□□ 0.81
CCDC38-201ENST00000344280 SIMC1Q8NDZ2 872 aa20.11■□□□□ 0.81
CCDC38-201ENST00000344280 SFXN5Q8TD22 340 aa20.11■□□□□ 0.81
CCDC38-201ENST00000344280 FGF11Q92914 225 aa20.11■□□□□ 0.81
CCDC38-201ENST00000344280 ZNF681Q96N22 645 aa20.11■□□□□ 0.81
CCDC38-201ENST00000344280 TTC36A6NLP5 189 aa20.11■□□□□ 0.81
CCDC38-201ENST00000344280 BTN3A3O00478 584 aa20.11■□□□□ 0.81
CCDC38-201ENST00000344280 CSNK2A2P19784 350 aaPredicted RBP20.11■□□□□ 0.81
CCDC38-201ENST00000344280 CRYBB2P43320 205 aa20.11■□□□□ 0.81
CCDC38-201ENST00000344280 TGM4P49221 684 aa20.11■□□□□ 0.81
CCDC38-201ENST00000344280 BTN3A2P78410 334 aa20.11■□□□□ 0.81
CCDC38-201ENST00000344280 ABATP80404 500 aa20.11■□□□□ 0.81
CCDC38-201ENST00000344280 ZNF45Q02386 682 aa20.11■□□□□ 0.81
CCDC38-201ENST00000344280 ITPRIPL2Q3MIP1 535 aa20.11■□□□□ 0.81
CCDC38-201ENST00000344280 TMEM196Q5HYL7 178 aa20.11■□□□□ 0.81
CCDC38-201ENST00000344280 VN1R4Q7Z5H5 301 aa20.11■□□□□ 0.81
CCDC38-201ENST00000344280 FAM26EQ8N5C1 309 aa20.11■□□□□ 0.81
CCDC38-201ENST00000344280 NUP43Q8NFH3 380 aa20.11■□□□□ 0.81
CCDC38-201ENST00000344280 ELP4Q96EB1 424 aa20.11■□□□□ 0.81
CCDC38-201ENST00000344280 POLDIP3Q9BY77 421 aaKnown RBP20.11■□□□□ 0.81
CCDC38-201ENST00000344280 BARHL1Q9BZE3 327 aa20.11■□□□□ 0.81
CCDC38-201ENST00000344280 CFL2Q9Y281 166 aa20.11■□□□□ 0.81
CCDC38-201ENST00000344280 CARD8Q9Y2G2 431 aa20.11■□□□□ 0.81
CCDC38-201ENST00000344280 PEX16Q9Y5Y5 336 aa20.11■□□□□ 0.81
CCDC38-201ENST00000344280 TRBV23OR9-2A0A075B6M9 112 aa20.1■□□□□ 0.81
CCDC38-201ENST00000344280 A0A0G2JPF8 293 aa20.1■□□□□ 0.81
CCDC38-201ENST00000344280 HNRNPCL2B2RXH8 293 aa20.1■□□□□ 0.81
CCDC38-201ENST00000344280 HNRNPCL3B7ZW38 293 aa20.1■□□□□ 0.81
CCDC38-201ENST00000344280 H0Y8X5 98 aa20.1■□□□□ 0.81
CCDC38-201ENST00000344280 AQP9O43315 295 aa20.1■□□□□ 0.81
CCDC38-201ENST00000344280 HNRNPCL4P0DMR1 293 aa20.1■□□□□ 0.81
CCDC38-201ENST00000344280 ALOX12P18054 663 aa20.1■□□□□ 0.81
CCDC38-201ENST00000344280 EFNB1P98172 346 aa20.1■□□□□ 0.81
CCDC38-201ENST00000344280 MLLT1Q03111 559 aaPredicted RBP20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms