RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 MTMR14Q8NCE2 650 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 DMBX1Q8NFW5 382 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 SNIP1Q8TAD8 396 aaKnown RBP7.7□□□□□ -1.18
ATG4A-201ENST00000343524 NANPQ8TBE9 248 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 WDR20Q8TBZ3 569 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 RAD51AP1Q96B01 352 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 TMEM41AQ96HV5 264 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 RBM14Q96PK6 669 aaKnown RBP7.7□□□□□ -1.18
ATG4A-201ENST00000343524 HHIPQ96QV1 700 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 HBEGFQ99075 208 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 DDOQ99489 341 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 NTMT1Q9BV86 223 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 SARGQ9BW04 601 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 C1QTNF6Q9BXI9 259 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 ULBP1Q9BZM6 244 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 SLC39A8Q9C0K1 460 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 GPN1Q9HCN4 374 aaPredicted RBP7.7□□□□□ -1.18
ATG4A-201ENST00000343524 NLE1Q9NVX2 485 aaPredicted RBP7.7□□□□□ -1.18
ATG4A-201ENST00000343524 ASB6Q9NWX5 421 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 RPS6KB2Q9UBS0 482 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 GPR160Q9UJ42 338 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 SF3B6Q9Y3B4 125 aaKnown RBP7.7□□□□□ -1.18
ATG4A-201ENST00000343524 RAI2Q9Y5P3 530 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 DISC1C4P0D8 188 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 M0R129 80 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 LGALS8O00214 317 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 ATG12O94817 140 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 VTNP04004 478 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 GLAP06280 429 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 SRPRAP08240 638 aaKnown RBP7.7□□□□□ -1.18
ATG4A-201ENST00000343524 FBP1P09467 338 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 ATXN1LP0C7T5 689 aaKnown RBP7.7□□□□□ -1.18
ATG4A-201ENST00000343524 GABRA1P14867 456 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 ELK1P19419 428 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 PBX3P40426 434 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 CTBP2P56545 445 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 GMFBP60983 142 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 WDR5P61964 334 aaKnown RBP7.7□□□□□ -1.18
ATG4A-201ENST00000343524 ERVK-25P63136 954 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 SHC2P98077 582 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 NHLH1Q02575 133 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 ZNF155Q12901 538 aaPredicted RBP7.7□□□□□ -1.18
ATG4A-201ENST00000343524 SLC14A1Q13336 389 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 HLXQ14774 488 aaPredicted RBP7.7□□□□□ -1.18
ATG4A-201ENST00000343524 SMAD2Q15796 467 aaKnown RBP7.7□□□□□ -1.18
ATG4A-201ENST00000343524 ZNF124Q15973 351 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 NDUFA9Q16795 377 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 C9orf57Q5W0N0 161 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 SLC27A1Q6PCB7 646 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 SEZ6L2Q6UXD5 910 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 DEF8Q6ZN54 512 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 OAFQ86UD1 273 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 ANKRD46Q86W74 232 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 TBC1D19Q8N5T2 526 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 ARL6IP6Q8N6S5 226 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 RTL3Q8N8U3 475 aaKnown RBP7.7□□□□□ -1.18
ATG4A-201ENST00000343524 OR9Q2Q8NGE9 314 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 SH3RF2Q8TEC5 729 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 GLYATL2Q8WU03 294 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 GTPBP3Q969Y2 492 aaKnown RBP7.7□□□□□ -1.18
ATG4A-201ENST00000343524 ELP4Q96EB1 424 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 CMTM7Q96FZ5 175 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 MRPL48Q96GC5 212 aaKnown RBP7.7□□□□□ -1.18
ATG4A-201ENST00000343524 TEFMQ96QE5 360 aaKnown RBP7.7□□□□□ -1.18
ATG4A-201ENST00000343524 TSNAXQ99598 290 aaKnown RBP7.7□□□□□ -1.18
ATG4A-201ENST00000343524 MED10Q9BTT4 135 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 POLDIP3Q9BY77 421 aaKnown RBP7.7□□□□□ -1.18
ATG4A-201ENST00000343524 PIGMQ9H3S5 423 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 ANKRD19PQ9H560 264 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 FGF20Q9NP95 211 aaPredicted RBP7.7□□□□□ -1.18
ATG4A-201ENST00000343524 NT5MQ9NPB1 228 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 TLR8Q9NR97 1041 aaKnown RBP7.7□□□□□ -1.18
ATG4A-201ENST00000343524 MRPS18AQ9NVS2 196 aaKnown RBP7.7□□□□□ -1.18
ATG4A-201ENST00000343524 RLIMQ9NVW2 624 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 DNAJC27Q9NZQ0 273 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 FLRT1Q9NZU1 646 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 NEU3Q9UQ49 428 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 ANKRD12Q6UB98 2062 aa7.7□□□□□ -1.18
ATG4A-201ENST00000343524 RRN3P2A6NIE6 340 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 ANXA2P2A6NMY6 339 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 AGAP14A8MT82 685 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 C5orf58C9J3I9 102 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 MCRIP1C9JLW8 97 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 G3V3Q6 166 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 I6L893 689 aaPredicted RBP7.69□□□□□ -1.18
ATG4A-201ENST00000343524 ZNF593O00488 134 aaPredicted RBP7.69□□□□□ -1.18
ATG4A-201ENST00000343524 FFAR2O15552 330 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 EEF1E1O43324 174 aaKnown RBP7.69□□□□□ -1.18
ATG4A-201ENST00000343524 SUSD5O60279 629 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 LCMT2O60294 686 aaKnown RBP7.69□□□□□ -1.18
ATG4A-201ENST00000343524 HBP1O60381 514 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 NFATC1O95644 943 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 EGFP01133 1207 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 PRF1P14222 555 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 NPR2P20594 1047 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 XCR1P46094 333 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 PREPP48147 710 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 RGS4P49798 205 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 NDUFV1P49821 464 aa7.69□□□□□ -1.18
ATG4A-201ENST00000343524 TAF6P49848 677 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms