RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 PTGER4P35408 488 aa14.17□□□□□ -0.14
VAPA-201ENST00000340541 SLC18A1P54219 525 aa14.17□□□□□ -0.14
VAPA-201ENST00000340541 MAGOHP61326 146 aaKnown RBP14.17□□□□□ -0.14
VAPA-201ENST00000340541 PDE7AQ13946 482 aa14.17□□□□□ -0.14
VAPA-201ENST00000340541 NTRK2Q16620 822 aa14.17□□□□□ -0.14
VAPA-201ENST00000340541 GALNTL6Q49A17 601 aa14.17□□□□□ -0.14
VAPA-201ENST00000340541 BNC2Q6ZN30 1099 aaPredicted RBP14.17□□□□□ -0.14
VAPA-201ENST00000340541 ZNF781Q8N8C0 355 aa14.17□□□□□ -0.14
VAPA-201ENST00000340541 OR7G2Q8NG99 324 aa14.17□□□□□ -0.14
VAPA-201ENST00000340541 OR10G3Q8NGC4 313 aa14.17□□□□□ -0.14
VAPA-201ENST00000340541 PPP1R14CQ8TAE6 165 aa14.17□□□□□ -0.14
VAPA-201ENST00000340541 PAQR8Q8TEZ7 354 aa14.17□□□□□ -0.14
VAPA-201ENST00000340541 KAT2AQ92830 837 aa14.17□□□□□ -0.14
VAPA-201ENST00000340541 ERP27Q96DN0 273 aa14.17□□□□□ -0.14
VAPA-201ENST00000340541 ZNF764Q96H86 408 aaPredicted RBP14.17□□□□□ -0.14
VAPA-201ENST00000340541 TSSK3Q96PN8 268 aa14.17□□□□□ -0.14
VAPA-201ENST00000340541 STMN4Q9H169 189 aaPredicted RBP14.17□□□□□ -0.14
VAPA-201ENST00000340541 NXF5Q9H1B4 397 aaKnown RBP14.17□□□□□ -0.14
VAPA-201ENST00000340541 PROK2Q9HC23 129 aa14.17□□□□□ -0.14
VAPA-201ENST00000340541 MIEF1Q9NQG6 463 aa14.17□□□□□ -0.14
VAPA-201ENST00000340541 PFDN4Q9NQP4 134 aa14.17□□□□□ -0.14
VAPA-201ENST00000340541 SACM1LQ9NTJ5 587 aa14.17□□□□□ -0.14
VAPA-201ENST00000340541 GIMAP4Q9NUV9 329 aa14.17□□□□□ -0.14
VAPA-201ENST00000340541 BCAP29Q9UHQ4 241 aa14.17□□□□□ -0.14
VAPA-201ENST00000340541 BAIAP2L1Q9UHR4 511 aa14.17□□□□□ -0.14
VAPA-201ENST00000340541 HAO1Q9UJM8 370 aa14.17□□□□□ -0.14
VAPA-201ENST00000340541 NPIPA1Q9UND3 350 aa14.17□□□□□ -0.14
VAPA-201ENST00000340541 CHCHD2Q9Y6H1 151 aaPredicted RBP14.17□□□□□ -0.14
VAPA-201ENST00000340541 ASNA1O43681 348 aa14.16□□□□□ -0.14
VAPA-201ENST00000340541 PLOD3O60568 738 aa14.16□□□□□ -0.14
VAPA-201ENST00000340541 TBX19O60806 448 aa14.16□□□□□ -0.14
VAPA-201ENST00000340541 NME6O75414 186 aaPredicted RBP14.16□□□□□ -0.14
VAPA-201ENST00000340541 GLSO94925 669 aaPredicted RBP14.16□□□□□ -0.14
VAPA-201ENST00000340541 BCKDHAP12694 445 aa14.16□□□□□ -0.14
VAPA-201ENST00000340541 PRF1P14222 555 aa14.16□□□□□ -0.14
VAPA-201ENST00000340541 CNR1P21554 472 aa14.16□□□□□ -0.14
VAPA-201ENST00000340541 GRK2P25098 689 aa14.16□□□□□ -0.14
VAPA-201ENST00000340541 MPIP34949 423 aa14.16□□□□□ -0.14
VAPA-201ENST00000340541 DNASE1L1P49184 302 aa14.16□□□□□ -0.14
VAPA-201ENST00000340541 FOXO1Q12778 655 aa14.16□□□□□ -0.14
VAPA-201ENST00000340541 GTF3C1Q12789 2109 aa14.16□□□□□ -0.14
VAPA-201ENST00000340541 ZNF630Q2M218 657 aaPredicted RBP14.16□□□□□ -0.14
VAPA-201ENST00000340541 ZNF385BQ569K4 471 aa14.16□□□□□ -0.14
VAPA-201ENST00000340541 C6orf136Q5SQH8 315 aa14.16□□□□□ -0.14
VAPA-201ENST00000340541 HLA-DQA1Q5Y7H0 255 aa14.16□□□□□ -0.14
VAPA-201ENST00000340541 ANKRD26P1Q6NSI1 321 aa14.16□□□□□ -0.14
VAPA-201ENST00000340541 FGD2Q7Z6J4 655 aa14.16□□□□□ -0.14
VAPA-201ENST00000340541 MRGPRGQ86SM5 289 aa14.16□□□□□ -0.14
VAPA-201ENST00000340541 MCEMP1Q8IX19 187 aa14.16□□□□□ -0.14
VAPA-201ENST00000340541 DND1Q8IYX4 353 aaKnown RBP14.16□□□□□ -0.14
VAPA-201ENST00000340541 FAM9CQ8IZT9 166 aa14.16□□□□□ -0.14
VAPA-201ENST00000340541 TAGAPQ8N103 731 aa14.16□□□□□ -0.14
VAPA-201ENST00000340541 ANKRD42Q8N9B4 389 aa14.16□□□□□ -0.14
VAPA-201ENST00000340541 CLHC1Q8NHS4 586 aa14.16□□□□□ -0.14
VAPA-201ENST00000340541 GFM2Q969S9 779 aaKnown RBP14.16□□□□□ -0.14
VAPA-201ENST00000340541 CCDC120Q96HB5 630 aa14.16□□□□□ -0.14
VAPA-201ENST00000340541 PPP3R2Q96LZ3 170 aa14.16□□□□□ -0.14
VAPA-201ENST00000340541 AMDHD1Q96NU7 426 aa14.16□□□□□ -0.14
VAPA-201ENST00000340541 BBS4Q96RK4 519 aa14.16□□□□□ -0.14
VAPA-201ENST00000340541 FAM173AQ9BQD7 235 aa14.16□□□□□ -0.14
VAPA-201ENST00000340541 GLIPR2Q9H4G4 154 aa14.16□□□□□ -0.14
VAPA-201ENST00000340541 CNOT11Q9UKZ1 510 aaKnown RBP14.16□□□□□ -0.14
VAPA-201ENST00000340541 CFL2Q9Y281 166 aa14.16□□□□□ -0.14
VAPA-201ENST00000340541 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.16□□□□□ -0.14
VAPA-201ENST00000340541 RAP2CQ9Y3L5 183 aa14.16□□□□□ -0.14
VAPA-201ENST00000340541 NPFFR2Q9Y5X5 522 aa14.16□□□□□ -0.14
VAPA-201ENST00000340541 ZNF407Q9C0G0 2248 aa14.15□□□□□ -0.14
VAPA-201ENST00000340541 NINQ8N4C6 2090 aa14.15□□□□□ -0.14
VAPA-201ENST00000340541 HS6ST1O60243 411 aa14.15□□□□□ -0.14
VAPA-201ENST00000340541 PEX11AO75192 247 aa14.15□□□□□ -0.14
VAPA-201ENST00000340541 LRATO95237 230 aa14.15□□□□□ -0.14
VAPA-201ENST00000340541 PIGAP37287 484 aa14.15□□□□□ -0.14
VAPA-201ENST00000340541 SLC1A6P48664 564 aa14.15□□□□□ -0.14
VAPA-201ENST00000340541 NCBP2P52298 156 aaKnown RBP eCLIP14.15□□□□□ -0.142e-14■■■□□ 16.6
VAPA-201ENST00000340541 FBXW4P57775 412 aa14.15□□□□□ -0.14
VAPA-201ENST00000340541 BST1Q10588 318 aa14.15□□□□□ -0.14
VAPA-201ENST00000340541 NNATQ16517 81 aa14.15□□□□□ -0.14
VAPA-201ENST00000340541 CMPK2Q5EBM0 449 aa14.15□□□□□ -0.14
VAPA-201ENST00000340541 SLC22A10Q63ZE4 541 aa14.15□□□□□ -0.14
VAPA-201ENST00000340541 FBXW8Q8N3Y1 598 aa14.15□□□□□ -0.14
VAPA-201ENST00000340541 ARL8AQ96BM9 186 aa14.15□□□□□ -0.14
VAPA-201ENST00000340541 NTNG2Q96CW9 530 aa14.15□□□□□ -0.14
VAPA-201ENST00000340541 LCORQ96JN0 433 aaPredicted RBP14.15□□□□□ -0.14
VAPA-201ENST00000340541 VSTM2LQ96N03 204 aa14.15□□□□□ -0.14
VAPA-201ENST00000340541 TTTY12Q9BZ98 90 aa14.15□□□□□ -0.14
VAPA-201ENST00000340541 REEP4Q9H6H4 257 aa14.15□□□□□ -0.14
VAPA-201ENST00000340541 ZNF835Q9Y2P0 537 aa14.15□□□□□ -0.14
VAPA-201ENST00000340541 GPR55Q9Y2T6 319 aaPredicted RBP14.15□□□□□ -0.14
VAPA-201ENST00000340541 A0A087WV62 115 aa14.14□□□□□ -0.15
VAPA-201ENST00000340541 PLOD2O00469 737 aa14.14□□□□□ -0.15
VAPA-201ENST00000340541 TFECO14948 347 aaPredicted RBP14.14□□□□□ -0.15
VAPA-201ENST00000340541 TO15178 435 aa14.14□□□□□ -0.15
VAPA-201ENST00000340541 ZNHIT1O43257 154 aa14.14□□□□□ -0.15
VAPA-201ENST00000340541 AKAP10O43572 662 aa14.14□□□□□ -0.15
VAPA-201ENST00000340541 SLC19A2O60779 497 aa14.14□□□□□ -0.15
VAPA-201ENST00000340541 BCAS2O75934 225 aaPredicted RBP14.14□□□□□ -0.15
VAPA-201ENST00000340541 SNUPNO95149 360 aaKnown RBP14.14□□□□□ -0.15
VAPA-201ENST00000340541 PSMG1O95456 288 aa14.14□□□□□ -0.15
VAPA-201ENST00000340541 P04436 131 aa14.14□□□□□ -0.15
VAPA-201ENST00000340541 H2AFXP16104 143 aaPredicted RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms