RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 KCMF1Q9P0J7 381 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 CDV3Q9UKY7 258 aaKnown RBP7.79□□□□□ -1.16
HPS4-201ENST00000336873 CFL2Q9Y281 166 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 WDR45Q9Y484 360 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 CCL27Q9Y4X3 112 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 DOCK8Q8NF50 2099 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 WBP4O75554 376 aaKnown RBP7.79□□□□□ -1.16
HPS4-201ENST00000336873 B3GALNT1O75752 331 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 C7P10643 843 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 TNFSF8P32971 234 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 GRK5P34947 590 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 IFITM3Q01628 133 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 PLBD1Q6P4A8 553 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 METTL4Q8N3J2 472 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 DNAJC22Q8N4W6 341 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 MRPL43Q8N983 215 aaKnown RBP7.79□□□□□ -1.16
HPS4-201ENST00000336873 L3MBTL4Q8NA19 623 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 COQ8BQ96D53 544 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 DTD2Q96FN9 168 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 DPH1Q9BZG8 443 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 IL21RQ9HBE5 538 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 NEK6Q9HC98 313 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 RPL36Q9Y3U8 105 aaKnown RBP7.79□□□□□ -1.16
HPS4-201ENST00000336873 STON1Q9Y6Q2 735 aa7.79□□□□□ -1.16
HPS4-201ENST00000336873 ZSWIM8A7E2V4 1837 aa7.78□□□□□ -1.16
HPS4-201ENST00000336873 SMLR1H3BR10 107 aa7.78□□□□□ -1.16
HPS4-201ENST00000336873 TMPRSS11DO60235 418 aa7.78□□□□□ -1.16
HPS4-201ENST00000336873 SCN2BO60939 215 aa7.78□□□□□ -1.16
HPS4-201ENST00000336873 JRKO75564 520 aa7.78□□□□□ -1.16
HPS4-201ENST00000336873 ALPPP05187 535 aa7.78□□□□□ -1.16
HPS4-201ENST00000336873 FURINP09958 794 aa7.78□□□□□ -1.16
HPS4-201ENST00000336873 MPC1LP0DKB6 136 aa7.78□□□□□ -1.16
HPS4-201ENST00000336873 SLC2A2P11168 524 aaPredicted RBP7.78□□□□□ -1.16
HPS4-201ENST00000336873 APEHP13798 732 aaKnown RBP7.78□□□□□ -1.16
HPS4-201ENST00000336873 HOXA9P31269 272 aa7.78□□□□□ -1.16
HPS4-201ENST00000336873 TLX1P31314 330 aaPredicted RBP7.78□□□□□ -1.16
HPS4-201ENST00000336873 WNT3P56703 355 aa7.78□□□□□ -1.16
HPS4-201ENST00000336873 PRR5P85299 388 aa7.78□□□□□ -1.16
HPS4-201ENST00000336873 STX4Q12846 297 aa7.78□□□□□ -1.16
HPS4-201ENST00000336873 CBLBQ13191 982 aa7.78□□□□□ -1.16
HPS4-201ENST00000336873 NDUFA5Q16718 116 aa7.78□□□□□ -1.16
HPS4-201ENST00000336873 SPATS1Q496A3 300 aa7.78□□□□□ -1.16
HPS4-201ENST00000336873 FBXO46Q6PJ61 603 aaPredicted RBP7.78□□□□□ -1.16
HPS4-201ENST00000336873 FBXO15Q8NCQ5 510 aaPredicted RBP7.78□□□□□ -1.16
HPS4-201ENST00000336873 NUP43Q8NFH3 380 aa7.78□□□□□ -1.16
HPS4-201ENST00000336873 BEST4Q8NFU0 473 aa7.78□□□□□ -1.16
HPS4-201ENST00000336873 ADAMTS16Q8TE57 1224 aa7.78□□□□□ -1.16
HPS4-201ENST00000336873 RLN3Q8WXF3 142 aa7.78□□□□□ -1.16
HPS4-201ENST00000336873 RERGQ96A58 199 aaPredicted RBP7.78□□□□□ -1.16
HPS4-201ENST00000336873 ISG20Q96AZ6 181 aaKnown RBP7.78□□□□□ -1.16
HPS4-201ENST00000336873 TMEM80Q96HE8 168 aa7.78□□□□□ -1.16
HPS4-201ENST00000336873 SP140LQ9H930 580 aa7.78□□□□□ -1.16
HPS4-201ENST00000336873 PRRC2CQ9Y520 2896 aaKnown RBP7.78□□□□□ -1.16
HPS4-201ENST00000336873 DAPL1A0PJW8 107 aa7.78□□□□□ -1.16
HPS4-201ENST00000336873 BLOC1S5-TXNDC5H3BN57 136 aa7.78□□□□□ -1.16
HPS4-201ENST00000336873 KHNYNO15037 678 aaKnown RBP7.78□□□□□ -1.16
HPS4-201ENST00000336873 FCMRO60667 390 aa7.78□□□□□ -1.16
HPS4-201ENST00000336873 SLC35G6P0C7Q6 338 aa7.78□□□□□ -1.16
HPS4-201ENST00000336873 UQCRC2P22695 453 aa7.78□□□□□ -1.16
HPS4-201ENST00000336873 GCGRP47871 477 aa7.78□□□□□ -1.16
HPS4-201ENST00000336873 ANXA11P50995 505 aaKnown RBP7.78□□□□□ -1.16
HPS4-201ENST00000336873 LBX1P52954 281 aa7.78□□□□□ -1.16
HPS4-201ENST00000336873 SCN1BQ07699 218 aa7.78□□□□□ -1.16
HPS4-201ENST00000336873 ZNF155Q12901 538 aaPredicted RBP7.78□□□□□ -1.16
HPS4-201ENST00000336873 GBX1Q14549 363 aa7.78□□□□□ -1.16
HPS4-201ENST00000336873 TANGO2Q6ICL3 276 aa7.78□□□□□ -1.16
HPS4-201ENST00000336873 FGD2Q7Z6J4 655 aa7.78□□□□□ -1.16
HPS4-201ENST00000336873 SLC9B2Q86UD5 537 aa7.78□□□□□ -1.16
HPS4-201ENST00000336873 LACC1Q8IV20 430 aa7.78□□□□□ -1.16
HPS4-201ENST00000336873 CCDC71Q8IV32 467 aaPredicted RBP7.78□□□□□ -1.16
HPS4-201ENST00000336873 RHOXF1Q8NHV9 184 aa7.78□□□□□ -1.16
HPS4-201ENST00000336873 PIK3R3Q92569 461 aa7.78□□□□□ -1.16
HPS4-201ENST00000336873 TADA1Q96BN2 335 aa7.78□□□□□ -1.16
HPS4-201ENST00000336873 TRMT2BQ96GJ1 504 aaKnown RBP7.78□□□□□ -1.16
HPS4-201ENST00000336873 ZNF559Q9BR84 538 aa7.78□□□□□ -1.16
HPS4-201ENST00000336873 C1QTNF3Q9BXJ4 246 aa7.78□□□□□ -1.16
HPS4-201ENST00000336873 MAGIXQ9H6Y5 334 aa7.78□□□□□ -1.16
HPS4-201ENST00000336873 TAAR2Q9P1P5 351 aa7.78□□□□□ -1.16
HPS4-201ENST00000336873 ATG4BQ9Y4P1 393 aa7.78□□□□□ -1.16
HPS4-201ENST00000336873 PCYT1BQ9Y5K3 369 aaPredicted RBP7.78□□□□□ -1.16
HPS4-201ENST00000336873 ZSCAN5BA6NJL1 495 aa7.77□□□□□ -1.16
HPS4-201ENST00000336873 B4DGG1 531 aa7.77□□□□□ -1.16
HPS4-201ENST00000336873 GFYI3L273 518 aa7.77□□□□□ -1.16
HPS4-201ENST00000336873 SLC2A10O95528 541 aa7.77□□□□□ -1.16
HPS4-201ENST00000336873 CDK1P06493 297 aa7.77□□□□□ -1.16
HPS4-201ENST00000336873 SPNP16150 400 aa7.77□□□□□ -1.16
HPS4-201ENST00000336873 RHCEP18577 417 aa7.77□□□□□ -1.16
HPS4-201ENST00000336873 AHCYP23526 432 aa7.77□□□□□ -1.16
HPS4-201ENST00000336873 MAOBP27338 520 aa7.77□□□□□ -1.16
HPS4-201ENST00000336873 RPS19P39019 145 aaKnown RBP7.77□□□□□ -1.16
HPS4-201ENST00000336873 SLC6A12P48065 614 aa7.77□□□□□ -1.16
HPS4-201ENST00000336873 SOX2P48431 317 aa7.77□□□□□ -1.16
HPS4-201ENST00000336873 ERVK-21P61565 698 aa7.77□□□□□ -1.16
HPS4-201ENST00000336873 SP140Q13342 867 aa7.77□□□□□ -1.16
HPS4-201ENST00000336873 EXOSC7Q15024 291 aaKnown RBP7.77□□□□□ -1.16
HPS4-201ENST00000336873 SLC16A12Q6ZSM3 486 aa7.77□□□□□ -1.16
HPS4-201ENST00000336873 USP51Q70EK9 711 aa7.77□□□□□ -1.16
HPS4-201ENST00000336873 CPOQ8IVL8 374 aa7.77□□□□□ -1.16
HPS4-201ENST00000336873 OR8J2Q8NGG1 315 aa7.77□□□□□ -1.16
HPS4-201ENST00000336873 NEIL3Q8TAT5 605 aa7.77□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms