RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 AMIGO1Q86WK6 493 aa17.8■□□□□ 0.44
RFTN1-201ENST00000334133 AMER2Q8N7J2 671 aa17.8■□□□□ 0.44
RFTN1-201ENST00000334133 NUP43Q8NFH3 380 aa17.8■□□□□ 0.44
RFTN1-201ENST00000334133 TMEM203Q969S6 136 aa17.8■□□□□ 0.44
RFTN1-201ENST00000334133 OPALINQ96PE5 141 aa17.8■□□□□ 0.44
RFTN1-201ENST00000334133 PSD2Q9BQI7 771 aa17.8■□□□□ 0.44
RFTN1-201ENST00000334133 ENOPH1Q9UHY7 261 aa17.8■□□□□ 0.44
RFTN1-201ENST00000334133 SLC9A8Q9Y2E8 581 aa17.8■□□□□ 0.44
RFTN1-201ENST00000334133 SMIM30A4D0T7 59 aa17.8■□□□□ 0.44
RFTN1-201ENST00000334133 CTDSP2O14595 271 aa17.8■□□□□ 0.44
RFTN1-201ENST00000334133 ZSCAN9O15535 394 aaPredicted RBP17.8■□□□□ 0.44
RFTN1-201ENST00000334133 ATXN8OSP0DMR3 200 aa17.8■□□□□ 0.44
RFTN1-201ENST00000334133 LAMP2P13473 410 aa17.8■□□□□ 0.44
RFTN1-201ENST00000334133 HOXB2P14652 356 aa17.8■□□□□ 0.44
RFTN1-201ENST00000334133 DLX2Q07687 328 aaPredicted RBP17.8■□□□□ 0.44
RFTN1-201ENST00000334133 TMEM35AQ53FP2 167 aa17.8■□□□□ 0.44
RFTN1-201ENST00000334133 ATCAYQ86WG3 371 aa17.8■□□□□ 0.44
RFTN1-201ENST00000334133 NATD1Q8N6N6 113 aa17.8■□□□□ 0.44
RFTN1-201ENST00000334133 KIAA1958Q8N8K9 716 aa17.8■□□□□ 0.44
RFTN1-201ENST00000334133 CDCA4Q9BXL8 241 aa17.8■□□□□ 0.44
RFTN1-201ENST00000334133 TMEM168Q9H0V1 697 aa17.8■□□□□ 0.44
RFTN1-201ENST00000334133 SLC25A19Q9HC21 320 aa17.8■□□□□ 0.44
RFTN1-201ENST00000334133 SACM1LQ9NTJ5 587 aa17.8■□□□□ 0.44
RFTN1-201ENST00000334133 ARRDC5A6NEK1 342 aa17.79■□□□□ 0.44
RFTN1-201ENST00000334133 PLRG1O43660 514 aaKnown RBP17.79■□□□□ 0.44
RFTN1-201ENST00000334133 CSO75390 466 aaKnown RBP17.79■□□□□ 0.44
RFTN1-201ENST00000334133 KLF8O95600 359 aaPredicted RBP17.79■□□□□ 0.44
RFTN1-201ENST00000334133 CH25HO95992 272 aa17.79■□□□□ 0.44
RFTN1-201ENST00000334133 F3P13726 295 aa17.79■□□□□ 0.44
RFTN1-201ENST00000334133 CSNK2A2P19784 350 aaPredicted RBP17.79■□□□□ 0.44
RFTN1-201ENST00000334133 TGM1P22735 817 aa17.79■□□□□ 0.44
RFTN1-201ENST00000334133 EIF2DP41214 584 aaKnown RBP17.79■□□□□ 0.44
RFTN1-201ENST00000334133 ACTR1BP42025 376 aa17.79■□□□□ 0.44
RFTN1-201ENST00000334133 ACTR1AP61163 376 aa17.79■□□□□ 0.44
RFTN1-201ENST00000334133 SIM1P81133 766 aaPredicted RBP17.79■□□□□ 0.44
RFTN1-201ENST00000334133 DEFB134Q4QY38 66 aa17.79■□□□□ 0.44
RFTN1-201ENST00000334133 ZNF311Q5JNZ3 666 aa17.79■□□□□ 0.44
RFTN1-201ENST00000334133 SLC48A1Q6P1K1 146 aa17.79■□□□□ 0.44
RFTN1-201ENST00000334133 ZNF367Q7RTV3 350 aa17.79■□□□□ 0.44
RFTN1-201ENST00000334133 CADM3Q8N126 398 aa17.79■□□□□ 0.44
RFTN1-201ENST00000334133 IL17RCQ8NAC3 791 aa17.79■□□□□ 0.44
RFTN1-201ENST00000334133 TTLQ8NG68 377 aa17.79■□□□□ 0.44
RFTN1-201ENST00000334133 PATE1Q8WXA2 126 aa17.79■□□□□ 0.44
RFTN1-201ENST00000334133 TRMT61AQ96FX7 289 aaKnown RBP17.79■□□□□ 0.44
RFTN1-201ENST00000334133 MMP27Q9H306 513 aa17.79■□□□□ 0.44
RFTN1-201ENST00000334133 SH3D21A4FU49 640 aa17.79■□□□□ 0.44
RFTN1-201ENST00000334133 AGAP5A6NIR3 686 aa17.79■□□□□ 0.44
RFTN1-201ENST00000334133 CMPK1P30085 196 aa17.79■□□□□ 0.44
RFTN1-201ENST00000334133 PPP5CP53041 499 aa17.79■□□□□ 0.44
RFTN1-201ENST00000334133 TUBA1BP68363 451 aa17.79■□□□□ 0.44
RFTN1-201ENST00000334133 ALDH6A1Q02252 535 aaKnown RBP17.79■□□□□ 0.44
RFTN1-201ENST00000334133 MADCAM1Q13477 382 aa17.79■□□□□ 0.44
RFTN1-201ENST00000334133 FBXO43Q4G163 708 aa17.79■□□□□ 0.44
RFTN1-201ENST00000334133 MRM1Q6IN84 353 aaKnown RBP17.79■□□□□ 0.44
RFTN1-201ENST00000334133 TUBA1AQ71U36 451 aa17.79■□□□□ 0.44
RFTN1-201ENST00000334133 VN1R4Q7Z5H5 301 aa17.79■□□□□ 0.44
RFTN1-201ENST00000334133 KLHL6Q8WZ60 621 aa17.79■□□□□ 0.44
RFTN1-201ENST00000334133 CRELD1Q96HD1 420 aa17.79■□□□□ 0.44
RFTN1-201ENST00000334133 LRR1Q96L50 414 aa17.79■□□□□ 0.44
RFTN1-201ENST00000334133 HHATLQ9HCP6 504 aa17.79■□□□□ 0.44
RFTN1-201ENST00000334133 ZNF624Q9P2J8 865 aaPredicted RBP17.79■□□□□ 0.44
RFTN1-201ENST00000334133 CCRL2O00421 344 aa17.79■□□□□ 0.44
RFTN1-201ENST00000334133 RASGRP1O95267 797 aa17.79■□□□□ 0.44
RFTN1-201ENST00000334133 LGI1O95970 557 aa17.79■□□□□ 0.44
RFTN1-201ENST00000334133 EGFP01133 1207 aa17.79■□□□□ 0.44
RFTN1-201ENST00000334133 EIF2S1P05198 315 aaKnown RBP17.79■□□□□ 0.44
RFTN1-201ENST00000334133 DDX5P17844 614 aaKnown RBP17.79■□□□□ 0.44
RFTN1-201ENST00000334133 ALOX12P18054 663 aa17.79■□□□□ 0.44
RFTN1-201ENST00000334133 NTSR1P30989 418 aa17.79■□□□□ 0.44
RFTN1-201ENST00000334133 ACSL1P33121 698 aa17.79■□□□□ 0.44
RFTN1-201ENST00000334133 UGT2B10P36537 528 aa17.79■□□□□ 0.44
RFTN1-201ENST00000334133 SLC15A1P46059 708 aa17.79■□□□□ 0.44
RFTN1-201ENST00000334133 TAS2R41P59536 307 aa17.79■□□□□ 0.44
RFTN1-201ENST00000334133 MXD1Q05195 221 aa17.79■□□□□ 0.44
RFTN1-201ENST00000334133 PPP2R2DQ66LE6 453 aa17.79■□□□□ 0.44
RFTN1-201ENST00000334133 FAM111BQ6SJ93 734 aa17.79■□□□□ 0.44
RFTN1-201ENST00000334133 PLEKHG7Q6ZR37 379 aa17.79■□□□□ 0.44
RFTN1-201ENST00000334133 SLC9A6Q92581 669 aa17.79■□□□□ 0.44
RFTN1-201ENST00000334133 FUZQ9BT04 418 aa17.79■□□□□ 0.44
RFTN1-201ENST00000334133 PITHD1Q9GZP4 211 aaPredicted RBP17.79■□□□□ 0.44
RFTN1-201ENST00000334133 WDR70Q9NW82 654 aa17.79■□□□□ 0.44
RFTN1-201ENST00000334133 EHD3Q9NZN3 535 aa17.79■□□□□ 0.44
RFTN1-201ENST00000334133 ACAD8Q9UKU7 415 aa17.79■□□□□ 0.44
RFTN1-201ENST00000334133 CES1P1Q9UKY3 287 aa17.79■□□□□ 0.44
RFTN1-201ENST00000334133 A0A1W2PQF6 199 aa17.78■□□□□ 0.44
RFTN1-201ENST00000334133 GPR89AB7ZAQ6 455 aa17.78■□□□□ 0.44
RFTN1-201ENST00000334133 PROM1O43490 865 aa17.78■□□□□ 0.44
RFTN1-201ENST00000334133 MPZL2O60487 215 aa17.78■□□□□ 0.44
RFTN1-201ENST00000334133 HBQ1P09105 142 aa17.78■□□□□ 0.44
RFTN1-201ENST00000334133 GPR89BP0CG08 455 aa17.78■□□□□ 0.44
RFTN1-201ENST00000334133 MAN2A2P49641 1150 aa17.78■□□□□ 0.44
RFTN1-201ENST00000334133 AGERQ15109 404 aa17.78■□□□□ 0.44
RFTN1-201ENST00000334133 LIPKQ5VXJ0 399 aa17.78■□□□□ 0.44
RFTN1-201ENST00000334133 STEAP3Q658P3 488 aa17.78■□□□□ 0.44
RFTN1-201ENST00000334133 C12orf73Q69YU5 71 aa17.78■□□□□ 0.44
RFTN1-201ENST00000334133 KIF18BQ86Y91 864 aa17.78■□□□□ 0.44
RFTN1-201ENST00000334133 SLC16A11Q8NCK7 471 aa17.78■□□□□ 0.44
RFTN1-201ENST00000334133 KBTBD8Q8NFY9 601 aa17.78■□□□□ 0.44
RFTN1-201ENST00000334133 RASSF5Q8WWW0 418 aa17.78■□□□□ 0.44
RFTN1-201ENST00000334133 ELP4Q96EB1 424 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms