RNA–Protein interactions for RNA: ENST00000331456.6

TRAIP-201, Transcript of TRAF interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAIP, Length 2,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-201ENST00000331456 DEPDC4Q8N2C3 294 aa13.1□□□□□ -0.31
TRAIP-201ENST00000331456 DNAJC22Q8N4W6 341 aa13.1□□□□□ -0.31
TRAIP-201ENST00000331456 AQP11Q8NBQ7 271 aa13.1□□□□□ -0.31
TRAIP-201ENST00000331456 OR5T3Q8NGG3 340 aa13.1□□□□□ -0.31
TRAIP-201ENST00000331456 NR4A3Q92570 626 aa13.1□□□□□ -0.31
TRAIP-201ENST00000331456 SLC35A4Q96G79 324 aa13.1□□□□□ -0.31
TRAIP-201ENST00000331456 CNDP2Q96KP4 475 aaKnown RBP13.1□□□□□ -0.31
TRAIP-201ENST00000331456 MAP3K3Q99759 626 aa13.1□□□□□ -0.31
TRAIP-201ENST00000331456 NIPSNAP1Q9BPW8 284 aa13.1□□□□□ -0.31
TRAIP-201ENST00000331456 FNDC11Q9BVV2 318 aa13.1□□□□□ -0.31
TRAIP-201ENST00000331456 ANKRA2Q9H9E1 313 aa13.1□□□□□ -0.31
TRAIP-201ENST00000331456 FANCEQ9HB96 536 aa13.1□□□□□ -0.31
TRAIP-201ENST00000331456 ACAD8Q9UKU7 415 aa13.1□□□□□ -0.31
TRAIP-201ENST00000331456 C19orf53Q9UNZ5 99 aaPredicted RBP13.1□□□□□ -0.31
TRAIP-201ENST00000331456 A0A087WV62 115 aa13.1□□□□□ -0.31
TRAIP-201ENST00000331456 RHPN2P1A8MT19 583 aa13.1□□□□□ -0.31
TRAIP-201ENST00000331456 FGF17O60258 216 aa13.1□□□□□ -0.31
TRAIP-201ENST00000331456 LDB3O75112 727 aa13.1□□□□□ -0.31
TRAIP-201ENST00000331456 RDH16O75452 317 aa13.1□□□□□ -0.31
TRAIP-201ENST00000331456 ADAP00813 363 aa13.1□□□□□ -0.31
TRAIP-201ENST00000331456 IFI6P09912 130 aa13.1□□□□□ -0.31
TRAIP-201ENST00000331456 NT5EP21589 574 aa13.1□□□□□ -0.31
TRAIP-201ENST00000331456 FMO3P31513 532 aa13.1□□□□□ -0.31
TRAIP-201ENST00000331456 CSNK1EP49674 416 aaKnown RBP13.1□□□□□ -0.31
TRAIP-201ENST00000331456 ID2Q02363 134 aa13.1□□□□□ -0.31
TRAIP-201ENST00000331456 FOXD4Q12950 439 aaPredicted RBP13.1□□□□□ -0.31
TRAIP-201ENST00000331456 TUBA3CQ13748 450 aa13.1□□□□□ -0.31
TRAIP-201ENST00000331456 PRTGQ2VWP7 1150 aa13.1□□□□□ -0.31
TRAIP-201ENST00000331456 C14orf28Q4W4Y0 310 aa13.1□□□□□ -0.31
TRAIP-201ENST00000331456 OLIG3Q7RTU3 272 aa13.1□□□□□ -0.31
TRAIP-201ENST00000331456 GALNT15Q8N3T1 639 aa13.1□□□□□ -0.31
TRAIP-201ENST00000331456 LINC00471Q8N535 108 aa13.1□□□□□ -0.31
TRAIP-201ENST00000331456 C1orf216Q8TAB5 229 aa13.1□□□□□ -0.31
TRAIP-201ENST00000331456 SLC9A6Q92581 669 aa13.1□□□□□ -0.31
TRAIP-201ENST00000331456 GTPBP3Q969Y2 492 aaKnown RBP13.1□□□□□ -0.31
TRAIP-201ENST00000331456 RSPO3Q9BXY4 272 aaPredicted RBP13.1□□□□□ -0.31
TRAIP-201ENST00000331456 SLC38A1Q9H2H9 487 aa13.1□□□□□ -0.31
TRAIP-201ENST00000331456 CCNB1IP1Q9NPC3 277 aa13.1□□□□□ -0.31
TRAIP-201ENST00000331456 TMEM74BQ9NUR3 256 aa13.1□□□□□ -0.31
TRAIP-201ENST00000331456 KLHL28Q9NXS3 571 aa13.1□□□□□ -0.31
TRAIP-201ENST00000331456 MGAT4BQ9UQ53 548 aa13.1□□□□□ -0.31
TRAIP-201ENST00000331456 SIT1Q9Y3P8 196 aa13.1□□□□□ -0.31
TRAIP-201ENST00000331456 PCDHGA6Q9Y5G7 932 aa13.1□□□□□ -0.31
TRAIP-201ENST00000331456 DSPPQ9NZW4 1301 aa13.09□□□□□ -0.31
TRAIP-201ENST00000331456 TRBV4-1A0A0J9YWV2 114 aa13.09□□□□□ -0.31
TRAIP-201ENST00000331456 ENO4A6NNW6 628 aa13.09□□□□□ -0.31
TRAIP-201ENST00000331456 M0R3H8 397 aa13.09□□□□□ -0.31
TRAIP-201ENST00000331456 HCRTR1O43613 425 aa13.09□□□□□ -0.31
TRAIP-201ENST00000331456 XPNPEP2O43895 674 aa13.09□□□□□ -0.31
TRAIP-201ENST00000331456 NOL3O60936 208 aaKnown RBP13.09□□□□□ -0.31
TRAIP-201ENST00000331456 FAM20BO75063 409 aa13.09□□□□□ -0.31
TRAIP-201ENST00000331456 ELAVL4P26378 380 aaKnown RBP13.09□□□□□ -0.31
TRAIP-201ENST00000331456 MLLT3P42568 568 aaPredicted RBP13.09□□□□□ -0.31
TRAIP-201ENST00000331456 EPHA4P54764 986 aa13.09□□□□□ -0.31
TRAIP-201ENST00000331456 CHRNEQ04844 493 aa13.09□□□□□ -0.31
TRAIP-201ENST00000331456 HEPHL1Q6MZM0 1159 aa13.09□□□□□ -0.31
TRAIP-201ENST00000331456 RBM45Q8IUH3 476 aaKnown RBP13.09□□□□□ -0.31
TRAIP-201ENST00000331456 LACC1Q8IV20 430 aa13.09□□□□□ -0.31
TRAIP-201ENST00000331456 P3H2Q8IVL5 708 aa13.09□□□□□ -0.31
TRAIP-201ENST00000331456 OR4D11Q8NGI4 311 aa13.09□□□□□ -0.31
TRAIP-201ENST00000331456 OR9A4Q8NGU2 314 aa13.09□□□□□ -0.31
TRAIP-201ENST00000331456 ZNF420Q8TAQ5 688 aaPredicted RBP13.09□□□□□ -0.31
TRAIP-201ENST00000331456 DNASE2BQ8WZ79 361 aa13.09□□□□□ -0.31
TRAIP-201ENST00000331456 CCDC90BQ9GZT6 254 aa13.09□□□□□ -0.31
TRAIP-201ENST00000331456 RASSF1Q9NS23 344 aa13.09□□□□□ -0.31
TRAIP-201ENST00000331456 BLACEA4D250 179 aa13.08□□□□□ -0.31
TRAIP-201ENST00000331456 TLCD2A6NGC4 264 aa13.08□□□□□ -0.31
TRAIP-201ENST00000331456 BCAT2O15382 392 aaPredicted RBP13.08□□□□□ -0.31
TRAIP-201ENST00000331456 CHST10O43529 356 aa13.08□□□□□ -0.31
TRAIP-201ENST00000331456 OR10H3O60404 316 aa13.08□□□□□ -0.31
TRAIP-201ENST00000331456 PLOD3O60568 738 aa13.08□□□□□ -0.31
TRAIP-201ENST00000331456 MRPS14O60783 128 aaKnown RBP13.08□□□□□ -0.31
TRAIP-201ENST00000331456 SDC3O75056 442 aa13.08□□□□□ -0.31
TRAIP-201ENST00000331456 GASTP01350 101 aa13.08□□□□□ -0.31
TRAIP-201ENST00000331456 ALOX5P09917 674 aa13.08□□□□□ -0.31
TRAIP-201ENST00000331456 POU2F1P14859 743 aa13.08□□□□□ -0.31
TRAIP-201ENST00000331456 BCKDHBP21953 392 aa13.08□□□□□ -0.31
TRAIP-201ENST00000331456 AFF3P51826 1226 aaKnown RBP13.08□□□□□ -0.31
TRAIP-201ENST00000331456 UGT2B15P54855 530 aa13.08□□□□□ -0.31
TRAIP-201ENST00000331456 ZNF770Q6IQ21 691 aaPredicted RBP13.08□□□□□ -0.31
TRAIP-201ENST00000331456 ZCCHC12Q6PEW1 402 aa13.08□□□□□ -0.31
TRAIP-201ENST00000331456 ENTHD1Q8IYW4 607 aa13.08□□□□□ -0.31
TRAIP-201ENST00000331456 SLC16A11Q8NCK7 471 aa13.08□□□□□ -0.31
TRAIP-201ENST00000331456 TMEM52Q8NDY8 209 aa13.08□□□□□ -0.31
TRAIP-201ENST00000331456 FAM81AQ8TBF8 368 aa13.08□□□□□ -0.31
TRAIP-201ENST00000331456 ZNF675Q8TD23 568 aa13.08□□□□□ -0.31
TRAIP-201ENST00000331456 ADAMTS18Q8TE60 1221 aa13.08□□□□□ -0.31
TRAIP-201ENST00000331456 IPCEF1Q8WWN9 437 aaPredicted RBP13.08□□□□□ -0.31
TRAIP-201ENST00000331456 CDS1Q92903 461 aa13.08□□□□□ -0.31
TRAIP-201ENST00000331456 ZDHHC12Q96GR4 267 aa13.08□□□□□ -0.31
TRAIP-201ENST00000331456 MPP4Q96JB8 637 aa13.08□□□□□ -0.31
TRAIP-201ENST00000331456 PRRC1Q96M27 445 aa13.08□□□□□ -0.31
TRAIP-201ENST00000331456 GUCD1Q96NT3 240 aa13.08□□□□□ -0.31
TRAIP-201ENST00000331456 IER2Q9BTL4 223 aa13.08□□□□□ -0.31
TRAIP-201ENST00000331456 UCK2Q9BZX2 261 aa13.08□□□□□ -0.31
TRAIP-201ENST00000331456 DUSP15Q9H1R2 295 aaPredicted RBP13.08□□□□□ -0.31
TRAIP-201ENST00000331456 MTHFD2LQ9H903 347 aaPredicted RBP13.08□□□□□ -0.31
TRAIP-201ENST00000331456 SOHLH2Q9NX45 425 aa13.08□□□□□ -0.31
TRAIP-201ENST00000331456 EPHA6Q9UF33 1036 aa13.08□□□□□ -0.31
TRAIP-201ENST00000331456 A4GNTQ9UNA3 340 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms