RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 C11orf24Q96F05 449 aaPredicted RBP23.01■■□□□ 1.27
SOX1-201ENST00000330949 MTERF1Q99551 399 aaKnown RBP23.01■■□□□ 1.27
SOX1-201ENST00000330949 CACNG6Q9BXT2 260 aa23.01■■□□□ 1.27
SOX1-201ENST00000330949 SPATA6Q9NWH7 488 aaPredicted RBP23.01■■□□□ 1.27
SOX1-201ENST00000330949 CPNE7Q9UBL6 633 aa23.01■■□□□ 1.27
SOX1-201ENST00000330949 SLC28A2O43868 658 aa23■■□□□ 1.27
SOX1-201ENST00000330949 GIFP27352 417 aa23■■□□□ 1.27
SOX1-201ENST00000330949 TWF1Q12792 350 aa23■■□□□ 1.27
SOX1-201ENST00000330949 GRM7Q14831 915 aa23■■□□□ 1.27
SOX1-201ENST00000330949 PGBD2Q6P3X8 592 aa23■■□□□ 1.27
SOX1-201ENST00000330949 OAFQ86UD1 273 aa23■■□□□ 1.27
SOX1-201ENST00000330949 HNRNPCL2B2RXH8 293 aa23■■□□□ 1.27
SOX1-201ENST00000330949 SNAPC5O75971 98 aa23■■□□□ 1.27
SOX1-201ENST00000330949 APOL3O95236 402 aa23■■□□□ 1.27
SOX1-201ENST00000330949 H2AFB2P0C5Z0 115 aa23■■□□□ 1.27
SOX1-201ENST00000330949 ACRV1P26436 265 aa23■■□□□ 1.27
SOX1-201ENST00000330949 MAOBP27338 520 aa23■■□□□ 1.27
SOX1-201ENST00000330949 CTGFP29279 349 aa23■■□□□ 1.27
SOX1-201ENST00000330949 DDX39BQ13838 428 aaKnown RBP23■■□□□ 1.27
SOX1-201ENST00000330949 PUM1Q14671 1186 aaKnown RBP eCLIP23■■□□□ 1.27
SOX1-201ENST00000330949 LYPLAL1Q5VWZ2 237 aa23■■□□□ 1.27
SOX1-201ENST00000330949 LYPD4Q6UWN0 246 aa23■■□□□ 1.27
SOX1-201ENST00000330949 SEPT5Q99719 369 aaPredicted RBP23■■□□□ 1.27
SOX1-201ENST00000330949 NPAS1Q99742 590 aa23■■□□□ 1.27
SOX1-201ENST00000330949 BHLHE41Q9C0J9 482 aaPredicted RBP23■■□□□ 1.27
SOX1-201ENST00000330949 ACTR6Q9GZN1 396 aa23■■□□□ 1.27
SOX1-201ENST00000330949 SPRTNQ9H040 489 aaPredicted RBP23■■□□□ 1.27
SOX1-201ENST00000330949 METTL17Q9H7H0 456 aaPredicted RBP23■■□□□ 1.27
SOX1-201ENST00000330949 G3V3Q6 166 aa23■■□□□ 1.27
SOX1-201ENST00000330949 ARAFP10398 606 aa23■■□□□ 1.27
SOX1-201ENST00000330949 ETFDHQ16134 617 aa23■■□□□ 1.27
SOX1-201ENST00000330949 SLC30A8Q8IWU4 369 aa23■■□□□ 1.27
SOX1-201ENST00000330949 OR5T2Q8NGG2 359 aa23■■□□□ 1.27
SOX1-201ENST00000330949 ATOH1Q92858 354 aaPredicted RBP23■■□□□ 1.27
SOX1-201ENST00000330949 MAP4K5Q9Y4K4 846 aa23■■□□□ 1.27
SOX1-201ENST00000330949 M0QZQ0 153 aa22.99■■□□□ 1.27
SOX1-201ENST00000330949 PRODHO43272 600 aa22.99■■□□□ 1.27
SOX1-201ENST00000330949 GMDSO60547 372 aa22.99■■□□□ 1.27
SOX1-201ENST00000330949 NMBP08949 121 aa22.99■■□□□ 1.27
SOX1-201ENST00000330949 SRP9P49458 86 aaKnown RBP22.99■■□□□ 1.27
SOX1-201ENST00000330949 IRF8Q02556 426 aa22.99■■□□□ 1.27
SOX1-201ENST00000330949 BCL2L1Q07817 233 aa22.99■■□□□ 1.27
SOX1-201ENST00000330949 LIPJQ5W064 366 aa22.99■■□□□ 1.27
SOX1-201ENST00000330949 OTOP2Q7RTS6 562 aa22.99■■□□□ 1.27
SOX1-201ENST00000330949 TOMM5Q8N4H5 51 aa22.99■■□□□ 1.27
SOX1-201ENST00000330949 FBXO32Q969P5 355 aa22.99■■□□□ 1.27
SOX1-201ENST00000330949 CXorf40BQ96DE9 158 aa22.99■■□□□ 1.27
SOX1-201ENST00000330949 MS4A3Q96HJ5 214 aa22.99■■□□□ 1.27
SOX1-201ENST00000330949 CXorf58Q96LI9 332 aa22.99■■□□□ 1.27
SOX1-201ENST00000330949 FERD3LQ96RJ6 166 aa22.99■■□□□ 1.27
SOX1-201ENST00000330949 SERHL2Q9H4I8 314 aa22.99■■□□□ 1.27
SOX1-201ENST00000330949 EMC3Q9P0I2 261 aa22.99■■□□□ 1.27
SOX1-201ENST00000330949 A0A0U1RQF3 1178 aa22.99■■□□□ 1.27
SOX1-201ENST00000330949 ABCD4O14678 606 aa22.99■■□□□ 1.27
SOX1-201ENST00000330949 H1F0P07305 194 aaKnown RBP22.99■■□□□ 1.27
SOX1-201ENST00000330949 FGF2P09038 288 aa22.99■■□□□ 1.27
SOX1-201ENST00000330949 LIMS3P0CW19 117 aa22.99■■□□□ 1.27
SOX1-201ENST00000330949 LIMS4P0CW20 117 aa22.99■■□□□ 1.27
SOX1-201ENST00000330949 DRD2P14416 443 aa22.99■■□□□ 1.27
SOX1-201ENST00000330949 AKR1A1P14550 325 aa22.99■■□□□ 1.27
SOX1-201ENST00000330949 PYHIN1Q6K0P9 492 aa22.99■■□□□ 1.27
SOX1-201ENST00000330949 GPR135Q8IZ08 494 aa22.99■■□□□ 1.27
SOX1-201ENST00000330949 RAET1EQ8TD07 263 aa22.99■■□□□ 1.27
SOX1-201ENST00000330949 AHCYL2Q96HN2 611 aaKnown RBP22.99■■□□□ 1.27
SOX1-201ENST00000330949 CCSER2Q9H7U1 834 aa22.99■■□□□ 1.27
SOX1-201ENST00000330949 GAPDHSO14556 408 aaPredicted RBP22.98■■□□□ 1.27
SOX1-201ENST00000330949 CHST10O43529 356 aa22.98■■□□□ 1.27
SOX1-201ENST00000330949 IGLV3-27P01718 113 aa22.98■■□□□ 1.27
SOX1-201ENST00000330949 HMGN1P05114 100 aa22.98■■□□□ 1.27
SOX1-201ENST00000330949 CELP19835 753 aa22.98■■□□□ 1.27
SOX1-201ENST00000330949 HOXA1P49639 335 aaPredicted RBP22.98■■□□□ 1.27
SOX1-201ENST00000330949 GINS1Q14691 196 aa22.98■■□□□ 1.27
SOX1-201ENST00000330949 SLC36A2Q495M3 483 aa22.98■■□□□ 1.27
SOX1-201ENST00000330949 HBMQ6B0K9 141 aa22.98■■□□□ 1.27
SOX1-201ENST00000330949 KIAA1211LQ6NV74 962 aa22.98■■□□□ 1.27
SOX1-201ENST00000330949 NLRC3Q7RTR2 1065 aa22.98■■□□□ 1.27
SOX1-201ENST00000330949 BEST4Q8NFU0 473 aa22.98■■□□□ 1.27
SOX1-201ENST00000330949 OR4K1Q8NGD4 311 aa22.98■■□□□ 1.27
SOX1-201ENST00000330949 RPLP0P6Q8NHW5 317 aa22.98■■□□□ 1.27
SOX1-201ENST00000330949 SUSD3Q96L08 255 aa22.98■■□□□ 1.27
SOX1-201ENST00000330949 WRAP53Q9BUR4 548 aaKnown RBP22.98■■□□□ 1.27
SOX1-201ENST00000330949 SLC12A9Q9BXP2 914 aa22.98■■□□□ 1.27
SOX1-201ENST00000330949 CRLS1Q9UJA2 301 aa22.98■■□□□ 1.27
SOX1-201ENST00000330949 MRPS7Q9Y2R9 242 aaKnown RBP22.98■■□□□ 1.27
SOX1-201ENST00000330949 PLXNA3P51805 1871 aa22.98■■□□□ 1.27
SOX1-201ENST00000330949 PRAMEF12O95522 483 aa22.98■■□□□ 1.27
SOX1-201ENST00000330949 SOX18P35713 384 aa22.98■■□□□ 1.27
SOX1-201ENST00000330949 MTNR1AP48039 350 aa22.98■■□□□ 1.27
SOX1-201ENST00000330949 TAF10Q12962 218 aa22.98■■□□□ 1.27
SOX1-201ENST00000330949 ARMC12Q5T9G4 340 aa22.98■■□□□ 1.27
SOX1-201ENST00000330949 ZNF485Q8NCK3 441 aa22.98■■□□□ 1.27
SOX1-201ENST00000330949 MOSPD2Q8NHP6 518 aa22.98■■□□□ 1.27
SOX1-201ENST00000330949 WDR20Q8TBZ3 569 aa22.98■■□□□ 1.27
SOX1-201ENST00000330949 KCTD12Q96CX2 325 aaKnown RBP22.98■■□□□ 1.27
SOX1-201ENST00000330949 SAP130Q9H0E3 1048 aa22.98■■□□□ 1.27
SOX1-201ENST00000330949 ASB6Q9NWX5 421 aa22.98■■□□□ 1.27
SOX1-201ENST00000330949 TMEM5Q9Y2B1 443 aa22.98■■□□□ 1.27
SOX1-201ENST00000330949 C2orf92A0A1B0GVN3 265 aa22.97■■□□□ 1.27
SOX1-201ENST00000330949 UGDHO60701 494 aa22.97■■□□□ 1.27
SOX1-201ENST00000330949 C6orf47O95873 294 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms