RNA–Protein interactions for RNA: ENST00000329151.5

TMEM54-201, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best) BASIC

Gene TMEM54, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-201ENST00000329151 OMA1Q96E52 524 aa21.3■■□□□ 1
TMEM54-201ENST00000329151 LCORQ96JN0 433 aaPredicted RBP21.3■■□□□ 1
TMEM54-201ENST00000329151 ZNF358Q9NW07 568 aa21.3■■□□□ 1
TMEM54-201ENST00000329151 NINJ2Q9NZG7 142 aa21.3■■□□□ 1
TMEM54-201ENST00000329151 MED12Q93074 2177 aa21.29■■□□□ 1
TMEM54-201ENST00000329151 H0Y3Z8 333 aa21.29■■□□□ 1
TMEM54-201ENST00000329151 KIF2AO00139 706 aaPredicted RBP21.29■■□□□ 1
TMEM54-201ENST00000329151 ERN1O75460 977 aaKnown RBP21.29■■□□□ 1
TMEM54-201ENST00000329151 KRT20P35900 424 aa21.29■■□□□ 1
TMEM54-201ENST00000329151 CPA2P48052 419 aa21.29■■□□□ 1
TMEM54-201ENST00000329151 DCAF7P61962 342 aa21.29■■□□□ 1
TMEM54-201ENST00000329151 TRAF3Q13114 568 aa21.29■■□□□ 1
TMEM54-201ENST00000329151 GGTA1PQ4G0N0 100 aa21.29■■□□□ 1
TMEM54-201ENST00000329151 NHSL2Q5HYW2 709 aa21.29■■□□□ 1
TMEM54-201ENST00000329151 ENPP6Q6UWR7 440 aa21.29■■□□□ 1
TMEM54-201ENST00000329151 ZNF572Q7Z3I7 529 aaPredicted RBP21.29■■□□□ 1
TMEM54-201ENST00000329151 FAM83FQ8NEG4 500 aaPredicted RBP21.29■■□□□ 1
TMEM54-201ENST00000329151 NSUN5Q96P11 429 aaKnown RBP21.29■■□□□ 1
TMEM54-201ENST00000329151 YIPF4Q9BSR8 244 aa21.29■■□□□ 1
TMEM54-201ENST00000329151 ITPAQ9BY32 194 aa21.29■■□□□ 1
TMEM54-201ENST00000329151 CALHM2Q9HA72 323 aa21.29■■□□□ 1
TMEM54-201ENST00000329151 CBLCQ9ULV8 474 aa21.29■■□□□ 1
TMEM54-201ENST00000329151 MAPRE3Q9UPY8 281 aa21.29■■□□□ 1
TMEM54-201ENST00000329151 ACANP16112 2415 aa21.28■■□□□ 1
TMEM54-201ENST00000329151 RHOXF2BP0C7M4 288 aa21.28■■□□□ 1
TMEM54-201ENST00000329151 TMIGD3P0DMS9 266 aaPredicted RBP21.28■■□□□ 1
TMEM54-201ENST00000329151 COL6A2P12110 1019 aa21.28■■□□□ 1
TMEM54-201ENST00000329151 PTPN6P29350 595 aa21.28■■□□□ 1
TMEM54-201ENST00000329151 ZNF136P52737 540 aa21.28■■□□□ 1
TMEM54-201ENST00000329151 MAP4K2Q12851 820 aa21.28■■□□□ 1
TMEM54-201ENST00000329151 SNTA1Q13424 505 aa21.28■■□□□ 1
TMEM54-201ENST00000329151 EXOSC7Q15024 291 aaKnown RBP21.28■■□□□ 1
TMEM54-201ENST00000329151 TEX35Q5T0J7 233 aa21.28■■□□□ 1
TMEM54-201ENST00000329151 FAM111BQ6SJ93 734 aa21.28■■□□□ 1
TMEM54-201ENST00000329151 CAMKMTQ7Z624 323 aa21.28■■□□□ 1
TMEM54-201ENST00000329151 TMCO6Q96DC7 493 aa21.28■■□□□ 1
TMEM54-201ENST00000329151 WDYHV1Q96HA8 205 aa21.28■■□□□ 1
TMEM54-201ENST00000329151 MRPL57Q9BQC6 102 aaKnown RBP21.28■■□□□ 1
TMEM54-201ENST00000329151 TMUB1Q9BVT8 246 aa21.28■■□□□ 1
TMEM54-201ENST00000329151 CXXC4Q9H2H0 198 aa21.28■■□□□ 1
TMEM54-201ENST00000329151 MRPL46Q9H2W6 279 aaKnown RBP21.28■■□□□ 1
TMEM54-201ENST00000329151 BRF2Q9HAW0 419 aa21.28■■□□□ 1
TMEM54-201ENST00000329151 POC1B-GALNT4F8VUJ3 575 aa21.27■■□□□ 1
TMEM54-201ENST00000329151 ATP1B1P05026 303 aa21.27■■□□□ 1
TMEM54-201ENST00000329151 EPXP11678 715 aa21.27■■□□□ 1
TMEM54-201ENST00000329151 KLK2P20151 261 aa21.27■■□□□ 1
TMEM54-201ENST00000329151 CNTFP26441 200 aa21.27■■□□□ 1
TMEM54-201ENST00000329151 AGFG1P52594 562 aaKnown RBP21.27■■□□□ 1
TMEM54-201ENST00000329151 KEAP1Q14145 624 aa21.27■■□□□ 1
TMEM54-201ENST00000329151 PRICKLE4Q2TBC4 344 aa21.27■■□□□ 1
TMEM54-201ENST00000329151 FNDC7Q5VTL7 733 aa21.27■■□□□ 1
TMEM54-201ENST00000329151 SLC44A1Q8WWI5 657 aa21.27■■□□□ 1
TMEM54-201ENST00000329151 PAFAH2Q99487 392 aa21.27■■□□□ 1
TMEM54-201ENST00000329151 LRRC1Q9BTT6 524 aa21.27■■□□□ 1
TMEM54-201ENST00000329151 LIME1Q9H400 295 aa21.27■■□□□ 1
TMEM54-201ENST00000329151 SERHLQ9NQF3 203 aa21.27■■□□□ 1
TMEM54-201ENST00000329151 ZDHHC18Q9NUE0 388 aa21.27■■□□□ 1
TMEM54-201ENST00000329151 GIMAP4Q9NUV9 329 aa21.27■■□□□ 1
TMEM54-201ENST00000329151 MAT2BQ9NZL9 334 aa21.27■■□□□ 1
TMEM54-201ENST00000329151 EHD3Q9NZN3 535 aa21.27■■□□□ 1
TMEM54-201ENST00000329151 MBD3L4A6NDZ8 208 aaPredicted RBP21.26■□□□□ 0.99
TMEM54-201ENST00000329151 MBD3L3A6NE82 208 aaPredicted RBP21.26■□□□□ 0.99
TMEM54-201ENST00000329151 PRAMEF25A6NGN4 478 aa21.26■□□□□ 0.99
TMEM54-201ENST00000329151 MBD3L5A6NJ08 208 aaPredicted RBP21.26■□□□□ 0.99
TMEM54-201ENST00000329151 KDM4EB2RXH2 506 aaPredicted RBP21.26■□□□□ 0.99
TMEM54-201ENST00000329151 SNPHO15079 494 aa21.26■□□□□ 0.99
TMEM54-201ENST00000329151 ICOSLGO75144 302 aa21.26■□□□□ 0.99
TMEM54-201ENST00000329151 CBR3O75828 277 aa21.26■□□□□ 0.99
TMEM54-201ENST00000329151 BCAS2O75934 225 aaPredicted RBP21.26■□□□□ 0.99
TMEM54-201ENST00000329151 IL18BPO95998 194 aa21.26■□□□□ 0.99
TMEM54-201ENST00000329151 PDYNP01213 254 aa21.26■□□□□ 0.99
TMEM54-201ENST00000329151 TAC1P20366 129 aa21.26■□□□□ 0.99
TMEM54-201ENST00000329151 NAGLUP54802 743 aa21.26■□□□□ 0.99
TMEM54-201ENST00000329151 SORDQ00796 357 aa21.26■□□□□ 0.99
TMEM54-201ENST00000329151 SRYQ05066 204 aa21.26■□□□□ 0.99
TMEM54-201ENST00000329151 DAZAP2Q15038 168 aaPredicted RBP21.26■□□□□ 0.99
TMEM54-201ENST00000329151 WHAMMP3Q1A5X7 153 aa21.26■□□□□ 0.99
TMEM54-201ENST00000329151 ERCC6LQ2NKX8 1250 aa21.26■□□□□ 0.99
TMEM54-201ENST00000329151 IFNEQ86WN2 208 aa21.26■□□□□ 0.99
TMEM54-201ENST00000329151 OR52R1Q8NGF1 315 aa21.26■□□□□ 0.99
TMEM54-201ENST00000329151 MBD3L2Q8NHZ7 208 aaPredicted RBP21.26■□□□□ 0.99
TMEM54-201ENST00000329151 RDH11Q8TC12 318 aa21.26■□□□□ 0.99
TMEM54-201ENST00000329151 ZPLD1Q8TCW7 415 aa21.26■□□□□ 0.99
TMEM54-201ENST00000329151 ALPK1Q96QP1 1244 aa21.26■□□□□ 0.99
TMEM54-201ENST00000329151 TM9SF2Q99805 663 aa21.26■□□□□ 0.99
TMEM54-201ENST00000329151 ACBD3Q9H3P7 528 aa21.26■□□□□ 0.99
TMEM54-201ENST00000329151 ZBTB26Q9HCK0 441 aa21.26■□□□□ 0.99
TMEM54-201ENST00000329151 SENP1Q9P0U3 644 aa21.26■□□□□ 0.99
TMEM54-201ENST00000329151 UTS2RQ9UKP6 389 aa21.26■□□□□ 0.99
TMEM54-201ENST00000329151 NFU1Q9UMS0 254 aa21.26■□□□□ 0.99
TMEM54-201ENST00000329151 DTX4Q9Y2E6 619 aa21.26■□□□□ 0.99
TMEM54-201ENST00000329151 PLLPQ9Y342 182 aa21.26■□□□□ 0.99
TMEM54-201ENST00000329151 FLNAP21333 2647 aaKnown RBP21.25■□□□□ 0.99
TMEM54-201ENST00000329151 KIAA1549Q9HCM3 1950 aa21.25■□□□□ 0.99
TMEM54-201ENST00000329151 C2orf72A6NCS6 295 aa21.25■□□□□ 0.99
TMEM54-201ENST00000329151 REM1O75628 298 aa21.25■□□□□ 0.99
TMEM54-201ENST00000329151 KRT6AP02538 564 aa21.25■□□□□ 0.99
TMEM54-201ENST00000329151 RAF1P04049 648 aa21.25■□□□□ 0.99
TMEM54-201ENST00000329151 KRT6BP04259 564 aa21.25■□□□□ 0.99
TMEM54-201ENST00000329151 KRT6CP48668 564 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms