RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 UMODP07911 640 aa4.81□□□□□ -1.64
LRIT3-201ENST00000327908 ELAVL4P26378 380 aaKnown RBP4.81□□□□□ -1.64
LRIT3-201ENST00000327908 GPR143P51810 404 aa4.81□□□□□ -1.64
LRIT3-201ENST00000327908 UFM1P61960 85 aa4.81□□□□□ -1.64
LRIT3-201ENST00000327908 TIGD2Q4W5G0 525 aa4.81□□□□□ -1.64
LRIT3-201ENST00000327908 LIN52Q52LA3 116 aa4.81□□□□□ -1.64
LRIT3-201ENST00000327908 C18orf63Q68DL7 685 aa4.81□□□□□ -1.64
LRIT3-201ENST00000327908 OR4F3Q6IEY1 312 aa4.81□□□□□ -1.64
LRIT3-201ENST00000327908 MFSD12Q6NUT3 480 aa4.81□□□□□ -1.64
LRIT3-201ENST00000327908 ZNF621Q6ZSS3 439 aa4.81□□□□□ -1.64
LRIT3-201ENST00000327908 ZNF550Q7Z398 422 aa4.81□□□□□ -1.64
LRIT3-201ENST00000327908 MTDHQ86UE4 582 aaKnown RBP4.81□□□□□ -1.64
LRIT3-201ENST00000327908 FBXW8Q8N3Y1 598 aa4.81□□□□□ -1.64
LRIT3-201ENST00000327908 GALNT16Q8N428 558 aa4.81□□□□□ -1.64
LRIT3-201ENST00000327908 NFAM1Q8NET5 270 aaPredicted RBP4.81□□□□□ -1.64
LRIT3-201ENST00000327908 VPS33AQ96AX1 596 aa4.81□□□□□ -1.64
LRIT3-201ENST00000327908 REXO5Q96IC2 774 aaKnown RBP4.81□□□□□ -1.64
LRIT3-201ENST00000327908 MARK4Q96L34 752 aa4.81□□□□□ -1.64
LRIT3-201ENST00000327908 WWTR1Q9GZV5 400 aa4.81□□□□□ -1.64
LRIT3-201ENST00000327908 KRCC1Q9NPI7 259 aaPredicted RBP4.81□□□□□ -1.64
LRIT3-201ENST00000327908 CCDC167Q9P0B6 97 aa4.81□□□□□ -1.64
LRIT3-201ENST00000327908 A0A0G2JN53 185 aa4.81□□□□□ -1.64
LRIT3-201ENST00000327908 A8MVJ9 347 aa4.81□□□□□ -1.64
LRIT3-201ENST00000327908 PPM1BO75688 479 aa4.81□□□□□ -1.64
LRIT3-201ENST00000327908 CPSF4O95639 269 aaKnown RBP4.81□□□□□ -1.64
LRIT3-201ENST00000327908 DDAH2O95865 285 aa4.81□□□□□ -1.64
LRIT3-201ENST00000327908 C6orf47O95873 294 aa4.81□□□□□ -1.64
LRIT3-201ENST00000327908 P04436 131 aa4.81□□□□□ -1.64
LRIT3-201ENST00000327908 HOXD4P09016 255 aaPredicted RBP4.81□□□□□ -1.64
LRIT3-201ENST00000327908 FBXO45P0C2W1 286 aa4.81□□□□□ -1.64
LRIT3-201ENST00000327908 UMPSP11172 480 aa4.81□□□□□ -1.64
LRIT3-201ENST00000327908 LAMP1P11279 417 aa4.81□□□□□ -1.64
LRIT3-201ENST00000327908 HPGDP15428 266 aa4.81□□□□□ -1.64
LRIT3-201ENST00000327908 GPX2P18283 190 aa4.81□□□□□ -1.64
LRIT3-201ENST00000327908 MATN1P21941 496 aa4.81□□□□□ -1.64
LRIT3-201ENST00000327908 ITGA3P26006 1051 aa4.81□□□□□ -1.64
LRIT3-201ENST00000327908 ADH7P40394 386 aa4.81□□□□□ -1.64
LRIT3-201ENST00000327908 HTR3AP46098 478 aa4.81□□□□□ -1.64
LRIT3-201ENST00000327908 MAT1AQ00266 395 aaKnown RBP4.81□□□□□ -1.64
LRIT3-201ENST00000327908 PLCXD2Q0VAA5 305 aa4.81□□□□□ -1.64
LRIT3-201ENST00000327908 ARHGAP11BQ3KRB8 267 aa4.81□□□□□ -1.64
LRIT3-201ENST00000327908 RUNDC3AQ59EK9 446 aa4.81□□□□□ -1.64
LRIT3-201ENST00000327908 FHL5Q5TD97 284 aa4.81□□□□□ -1.64
LRIT3-201ENST00000327908 TCTN3Q6NUS6 607 aa4.81□□□□□ -1.64
LRIT3-201ENST00000327908 C6orf120Q7Z4R8 191 aa4.81□□□□□ -1.64
LRIT3-201ENST00000327908 LINC00471Q8N535 108 aa4.81□□□□□ -1.64
LRIT3-201ENST00000327908 JADE3Q92613 823 aa4.81□□□□□ -1.64
LRIT3-201ENST00000327908 CNRIP1Q96F85 164 aaPredicted RBP4.81□□□□□ -1.64
LRIT3-201ENST00000327908 COL21A1Q96P44 957 aa4.81□□□□□ -1.64
LRIT3-201ENST00000327908 CSF3RQ99062 836 aa4.81□□□□□ -1.64
LRIT3-201ENST00000327908 SMAD5Q99717 465 aaKnown RBP4.81□□□□□ -1.64
LRIT3-201ENST00000327908 CPPED1Q9BRF8 314 aaPredicted RBP4.81□□□□□ -1.64
LRIT3-201ENST00000327908 TACO1Q9BSH4 297 aaKnown RBP4.81□□□□□ -1.64
LRIT3-201ENST00000327908 OR8D2Q9GZM6 311 aa4.81□□□□□ -1.64
LRIT3-201ENST00000327908 MTHFD2LQ9H903 347 aaPredicted RBP4.81□□□□□ -1.64
LRIT3-201ENST00000327908 TPT1P8Q9HAU6 139 aa4.81□□□□□ -1.64
LRIT3-201ENST00000327908 CPNE5Q9HCH3 593 aa4.81□□□□□ -1.64
LRIT3-201ENST00000327908 TNFRSF12AQ9NP84 129 aa4.81□□□□□ -1.64
LRIT3-201ENST00000327908 HPF1Q9NWY4 346 aa4.81□□□□□ -1.64
LRIT3-201ENST00000327908 ADPRHL2Q9NX46 363 aa4.81□□□□□ -1.64
LRIT3-201ENST00000327908 SELENONQ9NZV5 590 aa4.81□□□□□ -1.64
LRIT3-201ENST00000327908 ERVK-19Q9WJR5 959 aa4.81□□□□□ -1.64
LRIT3-201ENST00000327908 CLIC1O00299 241 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 FAAHO00519 579 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 ARAFP10398 606 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 HSD17B1P14061 328 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 ITGA2P17301 1181 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 HTR1EP28566 365 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 PTPN6P29350 595 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 SEC24CP53992 1094 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 RNF4P78317 190 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 OLR1P78380 273 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 PTGR1Q14914 329 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 TLR1Q15399 786 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 TAF11Q15544 211 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 CYP51A1Q16850 503 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 LACTB2Q53H82 288 aaPredicted RBP4.8□□□□□ -1.64
LRIT3-201ENST00000327908 EXOSC6Q5RKV6 272 aaKnown RBP4.8□□□□□ -1.64
LRIT3-201ENST00000327908 PDSS1Q5T2R2 415 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 KIRREL2Q6UWL6 708 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 IGFL2Q6UWQ7 119 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 CYP4Z1Q86W10 505 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 ADCY4Q8NFM4 1077 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 OR7A2PQ8NGA2 310 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 OR52R1Q8NGF1 315 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 OR5T3Q8NGG3 340 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 C9orf43Q8TAL5 461 aaPredicted RBP4.8□□□□□ -1.64
LRIT3-201ENST00000327908 ZNF721Q8TF20 911 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 ZFP90Q8TF47 636 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 TMEM234Q8WY98 164 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 GTF2H4Q92759 462 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 MCUR1Q96AQ8 359 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 ANKRD27Q96NW4 1050 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 EBF4Q9BQW3 602 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 OSBPL10Q9BXB5 764 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 C12orf10Q9HB07 376 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 EXOSC3Q9NQT5 275 aaKnown RBP4.8□□□□□ -1.64
LRIT3-201ENST00000327908 CBLCQ9ULV8 474 aa4.8□□□□□ -1.64
LRIT3-201ENST00000327908 GPR55Q9Y2T6 319 aaPredicted RBP4.8□□□□□ -1.64
LRIT3-201ENST00000327908 BDP1A6H8Y1 2624 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms