RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 SLC38A5Q8WUX1 472 aa13.97□□□□□ -0.17
TCOF1-201ENST00000323668 CHTF18Q8WVB6 975 aa13.97□□□□□ -0.17
TCOF1-201ENST00000323668 YIPF6Q96EC8 236 aa13.97□□□□□ -0.17
TCOF1-201ENST00000323668 IL20RAQ9UHF4 553 aa13.97□□□□□ -0.17
TCOF1-201ENST00000323668 SLCO2B1O94956 709 aa13.97□□□□□ -0.17
TCOF1-201ENST00000323668 SCG5P05408 212 aa13.97□□□□□ -0.17
TCOF1-201ENST00000323668 LHCGRP22888 699 aa13.97□□□□□ -0.17
TCOF1-201ENST00000323668 ILKQ13418 452 aa13.97□□□□□ -0.17
TCOF1-201ENST00000323668 NTRK2Q16620 822 aa13.97□□□□□ -0.17
TCOF1-201ENST00000323668 LRRC26Q2I0M4 334 aa13.97□□□□□ -0.17
TCOF1-201ENST00000323668 POMZP3Q6PJE2 187 aa13.97□□□□□ -0.17
TCOF1-201ENST00000323668 CELF2-AS1Q8N7Q2 184 aa13.97□□□□□ -0.17
TCOF1-201ENST00000323668 LMNTD1Q8N9Z9 388 aa13.97□□□□□ -0.17
TCOF1-201ENST00000323668 HYLS1Q96M11 299 aa13.97□□□□□ -0.17
TCOF1-201ENST00000323668 OR4K3Q96R72 315 aa13.97□□□□□ -0.17
TCOF1-201ENST00000323668 TMEM38AQ9H6F2 299 aa13.97□□□□□ -0.17
TCOF1-201ENST00000323668 VNN3Q9NY84 501 aa13.97□□□□□ -0.17
TCOF1-201ENST00000323668 TMEFF2Q9UIK5 374 aaPredicted RBP13.97□□□□□ -0.17
TCOF1-201ENST00000323668 F11P03951 625 aa13.96□□□□□ -0.17
TCOF1-201ENST00000323668 SLC6A12P48065 614 aa13.96□□□□□ -0.17
TCOF1-201ENST00000323668 ZNF81P51508 661 aa13.96□□□□□ -0.17
TCOF1-201ENST00000323668 GAB1Q13480 694 aa13.96□□□□□ -0.17
TCOF1-201ENST00000323668 OR2A12Q8NGT7 310 aa13.96□□□□□ -0.17
TCOF1-201ENST00000323668 SLA2Q9H6Q3 261 aa13.96□□□□□ -0.17
TCOF1-201ENST00000323668 THSD1Q9NS62 852 aa13.96□□□□□ -0.17
TCOF1-201ENST00000323668 COL4A5P29400 1685 aa13.96□□□□□ -0.17
TCOF1-201ENST00000323668 KNL1Q8NG31 2342 aa13.96□□□□□ -0.17
TCOF1-201ENST00000323668 UNC119BA6NIH7 251 aa13.96□□□□□ -0.17
TCOF1-201ENST00000323668 SLC22A31A6NKX4 558 aa13.96□□□□□ -0.17
TCOF1-201ENST00000323668 SYN1P17600 705 aa13.96□□□□□ -0.17
TCOF1-201ENST00000323668 RAB28P51157 221 aa13.96□□□□□ -0.17
TCOF1-201ENST00000323668 ARFIP1P53367 373 aa13.96□□□□□ -0.17
TCOF1-201ENST00000323668 ID2Q02363 134 aa13.96□□□□□ -0.17
TCOF1-201ENST00000323668 PIAS4Q8N2W9 510 aaPredicted RBP13.96□□□□□ -0.17
TCOF1-201ENST00000323668 PXYLP1Q8TE99 480 aa13.96□□□□□ -0.17
TCOF1-201ENST00000323668 MYLIPQ8WY64 445 aa13.96□□□□□ -0.17
TCOF1-201ENST00000323668 DTD2Q96FN9 168 aa13.96□□□□□ -0.17
TCOF1-201ENST00000323668 TREX2Q9BQ50 279 aaPredicted RBP13.96□□□□□ -0.17
TCOF1-201ENST00000323668 SAP130Q9H0E3 1048 aa13.96□□□□□ -0.17
TCOF1-201ENST00000323668 RANBP3Q9H6Z4 567 aaPredicted RBP13.96□□□□□ -0.17
TCOF1-201ENST00000323668 MRTO4Q9UKD2 239 aaKnown RBP13.96□□□□□ -0.17
TCOF1-201ENST00000323668 FZD6O60353 706 aa13.96□□□□□ -0.18
TCOF1-201ENST00000323668 HMGN2P05204 90 aaKnown RBP13.96□□□□□ -0.18
TCOF1-201ENST00000323668 SEC13P55735 322 aa13.96□□□□□ -0.18
TCOF1-201ENST00000323668 MAP4K2Q12851 820 aa13.96□□□□□ -0.18
TCOF1-201ENST00000323668 SYPL1Q16563 259 aa13.96□□□□□ -0.18
TCOF1-201ENST00000323668 SOWAHCQ53LP3 525 aaPredicted RBP13.96□□□□□ -0.18
TCOF1-201ENST00000323668 ZNF676Q8N7Q3 588 aa13.96□□□□□ -0.18
TCOF1-201ENST00000323668 RLIMQ9NVW2 624 aa13.96□□□□□ -0.18
TCOF1-201ENST00000323668 FBXL12Q9NXK8 326 aa13.96□□□□□ -0.18
TCOF1-201ENST00000323668 GFYI3L273 518 aa13.96□□□□□ -0.18
TCOF1-201ENST00000323668 RGS9O75916 674 aaPredicted RBP13.96□□□□□ -0.18
TCOF1-201ENST00000323668 ADRB3P13945 408 aa13.96□□□□□ -0.18
TCOF1-201ENST00000323668 SNRPD2P62316 118 aaKnown RBP13.96□□□□□ -0.18
TCOF1-201ENST00000323668 KCNJ10P78508 379 aa13.96□□□□□ -0.18
TCOF1-201ENST00000323668 TAP2Q03519 686 aa13.96□□□□□ -0.18
TCOF1-201ENST00000323668 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.96□□□□□ -0.18
TCOF1-201ENST00000323668 ELMOD2Q8IZ81 293 aa13.96□□□□□ -0.18
TCOF1-201ENST00000323668 SLC44A3Q8N4M1 653 aa13.96□□□□□ -0.18
TCOF1-201ENST00000323668 OR56A3Q8NH54 315 aa13.96□□□□□ -0.18
TCOF1-201ENST00000323668 C15orf40Q8WUR7 153 aa13.96□□□□□ -0.18
TCOF1-201ENST00000323668 DEDD2Q8WXF8 326 aa13.96□□□□□ -0.18
TCOF1-201ENST00000323668 JPH3Q8WXH2 748 aaPredicted RBP13.96□□□□□ -0.18
TCOF1-201ENST00000323668 PRRC1Q96M27 445 aa13.96□□□□□ -0.18
TCOF1-201ENST00000323668 RHNO1Q9BSD3 238 aa13.96□□□□□ -0.18
TCOF1-201ENST00000323668 LGR4Q9BXB1 951 aa13.96□□□□□ -0.18
TCOF1-201ENST00000323668 A0A075B6Q4 140 aa13.95□□□□□ -0.18
TCOF1-201ENST00000323668 MCIDASD6RGH6 385 aa13.95□□□□□ -0.18
TCOF1-201ENST00000323668 B4GALT3O60512 393 aa13.95□□□□□ -0.18
TCOF1-201ENST00000323668 GNSP15586 552 aa13.95□□□□□ -0.18
TCOF1-201ENST00000323668 ACVR1BP36896 505 aa13.95□□□□□ -0.18
TCOF1-201ENST00000323668 TGFBR1P36897 503 aa13.95□□□□□ -0.18
TCOF1-201ENST00000323668 MASP1P48740 699 aa13.95□□□□□ -0.18
TCOF1-201ENST00000323668 SNTB2Q13425 540 aaKnown RBP13.95□□□□□ -0.18
TCOF1-201ENST00000323668 MLIPQ5VWP3 458 aa13.95□□□□□ -0.18
TCOF1-201ENST00000323668 PLBD1Q6P4A8 553 aa13.95□□□□□ -0.18
TCOF1-201ENST00000323668 CALHM3Q86XJ0 350 aa13.95□□□□□ -0.18
TCOF1-201ENST00000323668 CPOQ8IVL8 374 aa13.95□□□□□ -0.18
TCOF1-201ENST00000323668 LAX1Q8IWV1 398 aa13.95□□□□□ -0.18
TCOF1-201ENST00000323668 RPLP0P6Q8NHW5 317 aa13.95□□□□□ -0.18
TCOF1-201ENST00000323668 WBP2Q969T9 261 aa13.95□□□□□ -0.18
TCOF1-201ENST00000323668 AHCYL2Q96HN2 611 aaKnown RBP13.95□□□□□ -0.18
TCOF1-201ENST00000323668 TM9SF2Q99805 663 aa13.95□□□□□ -0.18
TCOF1-201ENST00000323668 CACNG6Q9BXT2 260 aa13.95□□□□□ -0.18
TCOF1-201ENST00000323668 TTTY10Q9BZA0 68 aa13.95□□□□□ -0.18
TCOF1-201ENST00000323668 GNG8Q9UK08 70 aa13.95□□□□□ -0.18
TCOF1-201ENST00000323668 MED16Q9Y2X0 877 aa13.95□□□□□ -0.18
TCOF1-201ENST00000323668 RWDD3Q9Y3V2 267 aa13.95□□□□□ -0.18
TCOF1-201ENST00000323668 COL11A2P13942 1736 aaPredicted RBP13.95□□□□□ -0.18
TCOF1-201ENST00000323668 IGLON5A6NGN9 336 aa13.95□□□□□ -0.18
TCOF1-201ENST00000323668 TRIM64CA6NLI5 447 aa13.95□□□□□ -0.18
TCOF1-201ENST00000323668 CASC3O15234 703 aaKnown RBP13.95□□□□□ -0.18
TCOF1-201ENST00000323668 FRS3O43559 492 aa13.95□□□□□ -0.18
TCOF1-201ENST00000323668 RPL13AP3Q6NVV1 102 aa13.95□□□□□ -0.18
TCOF1-201ENST00000323668 MSRB3Q8IXL7 192 aa13.95□□□□□ -0.18
TCOF1-201ENST00000323668 ZNF740Q8NDX6 193 aa13.95□□□□□ -0.18
TCOF1-201ENST00000323668 HERVK_113Q902F9 699 aa13.95□□□□□ -0.18
TCOF1-201ENST00000323668 UGT2A1Q9Y4X1 527 aa13.95□□□□□ -0.18
TCOF1-201ENST00000323668 SIPA1L1O43166 1804 aa13.95□□□□□ -0.18
TCOF1-201ENST00000323668 TRBV5-4A0A0C4DH59 114 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms