RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 SLC6A18Q96N87 628 aa21.03■□□□□ 0.96
PNKP-201ENST00000322344 OR7D2Q96RA2 312 aa21.03■□□□□ 0.96
PNKP-201ENST00000322344 ARHGDIGQ99819 225 aa21.03■□□□□ 0.96
PNKP-201ENST00000322344 TRIM45Q9H8W5 580 aaPredicted RBP21.03■□□□□ 0.96
PNKP-201ENST00000322344 CRNNQ9UBG3 495 aaPredicted RBP21.03■□□□□ 0.96
PNKP-201ENST00000322344 SLC13A4Q9UKG4 626 aa21.03■□□□□ 0.96
PNKP-201ENST00000322344 A0A075B6Q4 140 aa21.02■□□□□ 0.96
PNKP-201ENST00000322344 ALPPP05187 535 aa21.02■□□□□ 0.96
PNKP-201ENST00000322344 ASGR2P07307 311 aa21.02■□□□□ 0.96
PNKP-201ENST00000322344 IMPDH2P12268 514 aa21.02■□□□□ 0.96
PNKP-201ENST00000322344 SMSP52788 366 aa21.02■□□□□ 0.96
PNKP-201ENST00000322344 RAB8AP61006 207 aa21.02■□□□□ 0.96
PNKP-201ENST00000322344 CDK5Q00535 292 aa21.02■□□□□ 0.96
PNKP-201ENST00000322344 ZNF750Q32MQ0 723 aa21.02■□□□□ 0.96
PNKP-201ENST00000322344 INAVAQ3KP66 663 aa21.02■□□□□ 0.96
PNKP-201ENST00000322344 TJAP1Q5JTD0 557 aa21.02■□□□□ 0.96
PNKP-201ENST00000322344 SDE2Q6IQ49 451 aa21.02■□□□□ 0.96
PNKP-201ENST00000322344 AMIGO1Q86WK6 493 aa21.02■□□□□ 0.96
PNKP-201ENST00000322344 OR9Q1Q8NGQ5 310 aa21.02■□□□□ 0.96
PNKP-201ENST00000322344 GAL3ST3Q96A11 431 aa21.02■□□□□ 0.96
PNKP-201ENST00000322344 ELP4Q96EB1 424 aa21.02■□□□□ 0.96
PNKP-201ENST00000322344 C16orf58Q96GQ5 468 aa21.02■□□□□ 0.96
PNKP-201ENST00000322344 MYADMQ96S97 322 aa21.02■□□□□ 0.96
PNKP-201ENST00000322344 TRMT61BQ9BVS5 477 aaKnown RBP21.02■□□□□ 0.96
PNKP-201ENST00000322344 MKRN2Q9H000 416 aaKnown RBP21.02■□□□□ 0.96
PNKP-201ENST00000322344 IGFLR1Q9H665 355 aa21.02■□□□□ 0.96
PNKP-201ENST00000322344 SCHIP1Q9P0W5 487 aaPredicted RBP21.02■□□□□ 0.96
PNKP-201ENST00000322344 DIMT1Q9UNQ2 313 aaKnown RBP21.02■□□□□ 0.96
PNKP-201ENST00000322344 IRGMA1A4Y4 181 aa21.02■□□□□ 0.96
PNKP-201ENST00000322344 GPX5O75715 221 aa21.02■□□□□ 0.96
PNKP-201ENST00000322344 CHRM5P08912 532 aaPredicted RBP21.02■□□□□ 0.96
PNKP-201ENST00000322344 ALPPL2P10696 532 aa21.02■□□□□ 0.96
PNKP-201ENST00000322344 NTSR1P30989 418 aa21.02■□□□□ 0.96
PNKP-201ENST00000322344 KIAA1024LP59773 190 aa21.02■□□□□ 0.96
PNKP-201ENST00000322344 RPS15AP62244 130 aaKnown RBP21.02■□□□□ 0.96
PNKP-201ENST00000322344 ZNF311Q5JNZ3 666 aa21.02■□□□□ 0.96
PNKP-201ENST00000322344 ATAD3BQ5T9A4 648 aa21.02■□□□□ 0.96
PNKP-201ENST00000322344 MTSS1LQ765P7 747 aa21.02■□□□□ 0.96
PNKP-201ENST00000322344 OLIG3Q7RTU3 272 aa21.02■□□□□ 0.96
PNKP-201ENST00000322344 PAQR7Q86WK9 346 aa21.02■□□□□ 0.96
PNKP-201ENST00000322344 PARP16Q8N5Y8 322 aa21.02■□□□□ 0.96
PNKP-201ENST00000322344 GNPDA2Q8TDQ7 276 aa21.02■□□□□ 0.96
PNKP-201ENST00000322344 ZNF681Q96N22 645 aa21.02■□□□□ 0.96
PNKP-201ENST00000322344 NUAK2Q9H093 628 aa21.02■□□□□ 0.96
PNKP-201ENST00000322344 ANKRD19PQ9H560 264 aa21.02■□□□□ 0.96
PNKP-201ENST00000322344 FGF22Q9HCT0 170 aa21.02■□□□□ 0.96
PNKP-201ENST00000322344 LAMA2P24043 3122 aaKnown RBP21.02■□□□□ 0.95
PNKP-201ENST00000322344 TBC1D3DA0A087WVF3 549 aa21.01■□□□□ 0.95
PNKP-201ENST00000322344 TBC1D3IA0A087WXS9 549 aa21.01■□□□□ 0.95
PNKP-201ENST00000322344 TBC1D3EA0A087X179 549 aa21.01■□□□□ 0.95
PNKP-201ENST00000322344 TBC1D3KA0A087X1G2 549 aa21.01■□□□□ 0.95
PNKP-201ENST00000322344 PRSS38A1L453 326 aa21.01■□□□□ 0.95
PNKP-201ENST00000322344 TBC1D3FA6NER0 549 aaPredicted RBP21.01■□□□□ 0.95
PNKP-201ENST00000322344 TBC1D3LB9A6J9 549 aa21.01■□□□□ 0.95
PNKP-201ENST00000322344 MYL12BO14950 172 aa21.01■□□□□ 0.95
PNKP-201ENST00000322344 TLX2O43763 284 aaPredicted RBP21.01■□□□□ 0.95
PNKP-201ENST00000322344 PRKYO43930 277 aa21.01■□□□□ 0.95
PNKP-201ENST00000322344 TPST2O60704 377 aa21.01■□□□□ 0.95
PNKP-201ENST00000322344 SNX4O95219 450 aa21.01■□□□□ 0.95
PNKP-201ENST00000322344 TBC1D3HP0C7X1 549 aa21.01■□□□□ 0.95
PNKP-201ENST00000322344 C8orf89P0DMQ9 161 aa21.01■□□□□ 0.95
PNKP-201ENST00000322344 PSMA1P25786 263 aaKnown RBP21.01■□□□□ 0.95
PNKP-201ENST00000322344 IFNA8P32881 189 aa21.01■□□□□ 0.95
PNKP-201ENST00000322344 RGS1Q08116 209 aa21.01■□□□□ 0.95
PNKP-201ENST00000322344 MLLT11Q13015 90 aaPredicted RBP21.01■□□□□ 0.95
PNKP-201ENST00000322344 TBC1D3GQ6DHY5 549 aa21.01■□□□□ 0.95
PNKP-201ENST00000322344 TBC1D3CQ6IPX1 549 aa21.01■□□□□ 0.95
PNKP-201ENST00000322344 TBC1D3Q8IZP1 549 aaPredicted RBP21.01■□□□□ 0.95
PNKP-201ENST00000322344 IQCF1Q8N6M8 205 aa21.01■□□□□ 0.95
PNKP-201ENST00000322344 LCN9Q8WX39 176 aa21.01■□□□□ 0.95
PNKP-201ENST00000322344 GABRG3Q99928 467 aa21.01■□□□□ 0.95
PNKP-201ENST00000322344 SLC38A1Q9H2H9 487 aa21.01■□□□□ 0.95
PNKP-201ENST00000322344 CLEC2DQ9UHP7 191 aa21.01■□□□□ 0.95
PNKP-201ENST00000322344 ZNF229Q9UJW7 825 aa21.01■□□□□ 0.95
PNKP-201ENST00000322344 ATG2AQ2TAZ0 1938 aa21.01■□□□□ 0.95
PNKP-201ENST00000322344 SNTNA6NMZ2 147 aa21■□□□□ 0.95
PNKP-201ENST00000322344 TBX1O43435 398 aa21■□□□□ 0.95
PNKP-201ENST00000322344 RAB36O95755 333 aa21■□□□□ 0.95
PNKP-201ENST00000322344 NR2F6P10588 404 aa21■□□□□ 0.95
PNKP-201ENST00000322344 CKMT1AP12532 417 aa21■□□□□ 0.95
PNKP-201ENST00000322344 PTGER1P34995 402 aa21■□□□□ 0.95
PNKP-201ENST00000322344 MC3RP41968 323 aa21■□□□□ 0.95
PNKP-201ENST00000322344 TAS2R41P59536 307 aa21■□□□□ 0.95
PNKP-201ENST00000322344 KRR1Q13601 381 aaKnown RBP21■□□□□ 0.95
PNKP-201ENST00000322344 TRAM2Q15035 370 aa21■□□□□ 0.95
PNKP-201ENST00000322344 KLHL22Q53GT1 634 aa21■□□□□ 0.95
PNKP-201ENST00000322344 PARM1Q6UWI2 310 aa21■□□□□ 0.95
PNKP-201ENST00000322344 CADM3Q8N126 398 aa21■□□□□ 0.95
PNKP-201ENST00000322344 FAM210AQ96ND0 272 aa21■□□□□ 0.95
PNKP-201ENST00000322344 ACTRT3Q9BYD9 372 aa21■□□□□ 0.95
PNKP-201ENST00000322344 STUB1Q9UNE7 303 aa21■□□□□ 0.95
PNKP-201ENST00000322344 LOC110117498-PIK3R3F6TDL0 507 aa21■□□□□ 0.95
PNKP-201ENST00000322344 MAT2AP31153 395 aaKnown RBP21■□□□□ 0.95
PNKP-201ENST00000322344 SOX9P48436 509 aa21■□□□□ 0.95
PNKP-201ENST00000322344 BTN3A2P78410 334 aa21■□□□□ 0.95
PNKP-201ENST00000322344 EFNB1P98172 346 aa21■□□□□ 0.95
PNKP-201ENST00000322344 SYT14P1Q58G82 188 aa21■□□□□ 0.95
PNKP-201ENST00000322344 SPANXN2Q5MJ10 180 aa21■□□□□ 0.95
PNKP-201ENST00000322344 STEAP3Q658P3 488 aa21■□□□□ 0.95
PNKP-201ENST00000322344 WDR53Q7Z5U6 358 aaPredicted RBP21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms