RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 ETV5P41161 510 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 CASRP41180 1078 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 ZFP36L2P47974 494 aaKnown RBP3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 SEPHS1P49903 392 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 NRG3P56975 720 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 CDC20Q12834 499 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 STX4Q12846 297 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 GANABQ14697 944 aaKnown RBP3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 PCOLCEQ15113 449 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 MEP1AQ16819 746 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 DEFB134Q4QY38 66 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 C3orf38Q5JPI3 329 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 VWA5B1Q5TIE3 1220 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 HEPHL1Q6MZM0 1159 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 OPN5Q6U736 354 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 SCIMPQ6UWF3 145 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 C5orf46Q6UWT4 87 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 C6orf89Q6UWU4 347 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 TRPM8Q7Z2W7 1104 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 ZNF761Q86XN6 746 aaPredicted RBP3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 SLC34A3Q8N130 599 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 SLC43A2Q8N370 569 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 KCT2Q8NC54 265 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 KLHL29Q96CT2 875 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 MARK4Q96L34 752 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 SGCZQ96LD1 299 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 MAPKAP1Q9BPZ7 522 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 VN1R1Q9GZP7 353 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 LHPPQ9H008 270 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 PIGUQ9H490 435 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 KLHL31Q9H511 634 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 PIF1Q9H611 641 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 SYNDIG1Q9H7V2 258 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 CXorf21Q9HAI6 301 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 CACYBPQ9HB71 228 aaKnown RBP3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 CPNE5Q9HCH3 593 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 C8orf4Q9NR00 106 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 TIMM22Q9Y584 194 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 PCNX2A6NKB5 2137 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 A0A087WZY1 265 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 A0A0A6YYC8 382 aaPredicted RBP3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 C7orf72A4D263 438 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 CFAP73A6NFT4 308 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 I3L1I5 382 aaPredicted RBP3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 K7ENP7 123 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 SYT5O00445 386 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 CASC3O15234 703 aaKnown RBP3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 FMO6PO60774 539 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 FZD7O75084 574 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 SKAP2O75563 359 aaPredicted RBP3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 CBX7O95931 251 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 COX6A1P12074 109 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 COX4I1P13073 169 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 ETS2P15036 469 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 DLSTP36957 453 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 CLK3P49761 638 aaKnown RBP3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 PNLIPRP2P54317 469 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 OR4D2P58180 307 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 SLC26A5P58743 744 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 MAPKAPK3Q16644 382 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 HYAL4Q2M3T9 481 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 GALNTL6Q49A17 601 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 EIPR1Q53HC9 387 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 PIGGQ5H8A4 983 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 INO80CQ6PI98 192 aaPredicted RBP3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 RNF111Q6ZNA4 994 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 LRRC74BQ6ZQY2 392 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 MRGPREQ86SM8 312 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 PATL1Q86TB9 770 aaKnown RBP3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 PROSER1Q86XN7 944 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 PTRH1Q86Y79 214 aaKnown RBP3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 GRAMD2AQ8IUY3 354 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 OR9A4Q8NGU2 314 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 BCAS4Q8TDM0 211 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 RBM18Q96H35 190 aaKnown RBP3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 NSL1Q96IY1 281 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 C3orf30Q96M34 536 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 TRNT1Q96Q11 434 aaKnown RBP3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 KCNA7Q96RP8 456 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 GPATCH1Q9BRR8 931 aaKnown RBP3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 TNFRSF12AQ9NP84 129 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 SLCO1B3Q9NPD5 702 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 SDHAF3Q9NRP4 125 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 SLC22A11Q9NSA0 550 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 MAT2BQ9NZL9 334 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 TRPC4Q9UBN4 977 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 C3orf18Q9UK00 162 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 CROTQ9UKG9 612 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 YARS2Q9Y2Z4 477 aaKnown RBP3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 IFT52Q9Y366 437 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 MRPS2Q9Y399 296 aaKnown RBP3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 CLDN16Q9Y5I7 305 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 TNRC6AQ8NDV7 1962 aaKnown RBP3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 A0A0G2JND7 137 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 A0A0G2JPF8 293 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 OR6C70A6NIJ9 312 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 CCT8L1PA6NM43 557 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 HNRNPCL2B2RXH8 293 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 IDSB3KWA1 339 aa3.06□□□□□ -1.92
SCAMP1-201ENST00000320280 HNRNPCL3B7ZW38 293 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms