RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 C5orf58C9J3I9 102 aa14.69□□□□□ -0.06
SHROOM1-201ENST00000319854 C8orf89P0DMQ9 161 aa14.69□□□□□ -0.06
SHROOM1-201ENST00000319854 ENPP1P22413 925 aa14.69□□□□□ -0.06
SHROOM1-201ENST00000319854 CHMP24386 653 aa14.69□□□□□ -0.06
SHROOM1-201ENST00000319854 RORCP51449 518 aa14.69□□□□□ -0.06
SHROOM1-201ENST00000319854 AP2S1P53680 142 aaPredicted RBP14.69□□□□□ -0.06
SHROOM1-201ENST00000319854 EIF4HQ15056 248 aaKnown RBP14.69□□□□□ -0.06
SHROOM1-201ENST00000319854 CST6Q15828 149 aa14.69□□□□□ -0.06
SHROOM1-201ENST00000319854 LEXMQ3ZCV2 418 aa14.69□□□□□ -0.06
SHROOM1-201ENST00000319854 IFI44LQ53G44 452 aa14.69□□□□□ -0.06
SHROOM1-201ENST00000319854 GPR155Q7Z3F1 870 aa14.69□□□□□ -0.06
SHROOM1-201ENST00000319854 PLCZ1Q86YW0 608 aa14.69□□□□□ -0.06
SHROOM1-201ENST00000319854 LINC01555Q8NAE3 123 aa14.69□□□□□ -0.06
SHROOM1-201ENST00000319854 OR5D16Q8NGK9 328 aa14.69□□□□□ -0.06
SHROOM1-201ENST00000319854 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.69□□□□□ -0.06
SHROOM1-201ENST00000319854 CDCA4Q9BXL8 241 aa14.69□□□□□ -0.06
SHROOM1-201ENST00000319854 NLNQ9BYT8 704 aa14.69□□□□□ -0.06
SHROOM1-201ENST00000319854 DPEP2Q9H4A9 486 aa14.69□□□□□ -0.06
SHROOM1-201ENST00000319854 TRPC4Q9UBN4 977 aa14.69□□□□□ -0.06
SHROOM1-201ENST00000319854 CMAHPQ9Y471 501 aa14.69□□□□□ -0.06
SHROOM1-201ENST00000319854 TRBC2A0A5B9 178 aa14.69□□□□□ -0.06
SHROOM1-201ENST00000319854 SERTM1A2A2V5 107 aa14.69□□□□□ -0.06
SHROOM1-201ENST00000319854 PLD2O14939 933 aa14.69□□□□□ -0.06
SHROOM1-201ENST00000319854 TSC22D2O75157 780 aa14.69□□□□□ -0.06
SHROOM1-201ENST00000319854 TNFRSF21O75509 655 aa14.69□□□□□ -0.06
SHROOM1-201ENST00000319854 GPR19Q15760 415 aa14.69□□□□□ -0.06
SHROOM1-201ENST00000319854 KIAA1211LQ6NV74 962 aa14.69□□□□□ -0.06
SHROOM1-201ENST00000319854 RBM45Q8IUH3 476 aaKnown RBP14.69□□□□□ -0.06
SHROOM1-201ENST00000319854 TAGAPQ8N103 731 aa14.69□□□□□ -0.06
SHROOM1-201ENST00000319854 OR52N2Q8NGI0 321 aa14.69□□□□□ -0.06
SHROOM1-201ENST00000319854 EPHX3Q9H6B9 360 aa14.69□□□□□ -0.06
SHROOM1-201ENST00000319854 C1GALT1Q9NS00 363 aa14.69□□□□□ -0.06
SHROOM1-201ENST00000319854 IMPAD1Q9NX62 359 aa14.69□□□□□ -0.06
SHROOM1-201ENST00000319854 ATP6V1HQ9UI12 483 aa14.69□□□□□ -0.06
SHROOM1-201ENST00000319854 ALPK3Q96L96 1907 aa14.68□□□□□ -0.06
SHROOM1-201ENST00000319854 SLC35F4A4IF30 521 aa14.68□□□□□ -0.06
SHROOM1-201ENST00000319854 FOXE1O00358 373 aaPredicted RBP14.68□□□□□ -0.06
SHROOM1-201ENST00000319854 ARHGEF9O43307 516 aa14.68□□□□□ -0.06
SHROOM1-201ENST00000319854 VEGFDO43915 354 aa14.68□□□□□ -0.06
SHROOM1-201ENST00000319854 TMPRSS11DO60235 418 aa14.68□□□□□ -0.06
SHROOM1-201ENST00000319854 SOX14O95416 240 aa14.68□□□□□ -0.06
SHROOM1-201ENST00000319854 FEN1P39748 380 aaKnown RBP14.68□□□□□ -0.06
SHROOM1-201ENST00000319854 DPTQ07507 201 aa14.68□□□□□ -0.06
SHROOM1-201ENST00000319854 FGL2Q14314 439 aa14.68□□□□□ -0.06
SHROOM1-201ENST00000319854 LARS2Q15031 903 aaKnown RBP14.68□□□□□ -0.06
SHROOM1-201ENST00000319854 IRF4Q15306 451 aa14.68□□□□□ -0.06
SHROOM1-201ENST00000319854 TIMM50Q3ZCQ8 353 aa14.68□□□□□ -0.06
SHROOM1-201ENST00000319854 KHDRBS2Q5VWX1 349 aaKnown RBP14.68□□□□□ -0.06
SHROOM1-201ENST00000319854 SLC51BQ86UW2 128 aa14.68□□□□□ -0.06
SHROOM1-201ENST00000319854 PGBD3Q8N328 593 aa14.68□□□□□ -0.06
SHROOM1-201ENST00000319854 HORMAD2Q8N7B1 307 aa14.68□□□□□ -0.06
SHROOM1-201ENST00000319854 DENND6BQ8NEG7 585 aa14.68□□□□□ -0.06
SHROOM1-201ENST00000319854 HERVK_113Q902F9 699 aa14.68□□□□□ -0.06
SHROOM1-201ENST00000319854 INSM2Q96T92 566 aaPredicted RBP14.68□□□□□ -0.06
SHROOM1-201ENST00000319854 AIF1LQ9BQI0 150 aa14.68□□□□□ -0.06
SHROOM1-201ENST00000319854 GPR34Q9UPC5 381 aa14.68□□□□□ -0.06
SHROOM1-201ENST00000319854 SNRNP200O75643 2136 aaKnown RBP14.68□□□□□ -0.06
SHROOM1-201ENST00000319854 A0A1W2PQL4 384 aaPredicted RBP14.68□□□□□ -0.06
SHROOM1-201ENST00000319854 FABP12A6NFH5 140 aa14.68□□□□□ -0.06
SHROOM1-201ENST00000319854 LRRTM2O43300 516 aa14.68□□□□□ -0.06
SHROOM1-201ENST00000319854 ZNF250P15622 560 aa14.68□□□□□ -0.06
SHROOM1-201ENST00000319854 HLA-DMAP28067 261 aa14.68□□□□□ -0.06
SHROOM1-201ENST00000319854 UBE3AQ05086 875 aa14.68□□□□□ -0.06
SHROOM1-201ENST00000319854 TEAD4Q15561 434 aa14.68□□□□□ -0.06
SHROOM1-201ENST00000319854 TOR1AIP1Q5JTV8 583 aa14.68□□□□□ -0.06
SHROOM1-201ENST00000319854 KLHL17Q6TDP4 642 aa14.68□□□□□ -0.06
SHROOM1-201ENST00000319854 MEX3DQ86XN8 651 aaKnown RBP14.68□□□□□ -0.06
SHROOM1-201ENST00000319854 XAGE5Q8WWM1 108 aa14.68□□□□□ -0.06
SHROOM1-201ENST00000319854 FGF14Q92915 247 aa14.68□□□□□ -0.06
SHROOM1-201ENST00000319854 DIRAS2Q96HU8 199 aa14.68□□□□□ -0.06
SHROOM1-201ENST00000319854 WDFY2Q96P53 400 aa14.68□□□□□ -0.06
SHROOM1-201ENST00000319854 PBX4Q9BYU1 374 aa14.68□□□□□ -0.06
SHROOM1-201ENST00000319854 CORO2BQ9UQ03 480 aa14.68□□□□□ -0.06
SHROOM1-201ENST00000319854 C1QBP02746 253 aa14.67□□□□□ -0.06
SHROOM1-201ENST00000319854 NAT2P11245 290 aa14.67□□□□□ -0.06
SHROOM1-201ENST00000319854 PPIBP23284 216 aaKnown RBP14.67□□□□□ -0.06
SHROOM1-201ENST00000319854 PXNP49023 591 aaPredicted RBP14.67□□□□□ -0.06
SHROOM1-201ENST00000319854 AGBL4Q5VU57 503 aa14.67□□□□□ -0.06
SHROOM1-201ENST00000319854 PAQR6Q6TCH4 344 aa14.67□□□□□ -0.06
SHROOM1-201ENST00000319854 PARM1Q6UWI2 310 aa14.67□□□□□ -0.06
SHROOM1-201ENST00000319854 DEF8Q6ZN54 512 aa14.67□□□□□ -0.06
SHROOM1-201ENST00000319854 FAM129CQ86XR2 697 aa14.67□□□□□ -0.06
SHROOM1-201ENST00000319854 ESX1Q8N693 406 aa14.67□□□□□ -0.06
SHROOM1-201ENST00000319854 OR5K2Q8NHB8 316 aa14.67□□□□□ -0.06
SHROOM1-201ENST00000319854 DOK4Q8TEW6 326 aa14.67□□□□□ -0.06
SHROOM1-201ENST00000319854 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.67□□□□□ -0.06
SHROOM1-201ENST00000319854 KLHL31Q9H511 634 aa14.67□□□□□ -0.06
SHROOM1-201ENST00000319854 KCNK12Q9HB15 430 aa14.67□□□□□ -0.06
SHROOM1-201ENST00000319854 MYNNQ9NPC7 610 aa14.67□□□□□ -0.06
SHROOM1-201ENST00000319854 DPP7Q9UHL4 492 aa14.67□□□□□ -0.06
SHROOM1-201ENST00000319854 NDRG2Q9UN36 371 aaKnown RBP14.67□□□□□ -0.06
SHROOM1-201ENST00000319854 A0A1W2PS29 197 aa14.67□□□□□ -0.06
SHROOM1-201ENST00000319854 CDRT1O95170 752 aa14.67□□□□□ -0.06
SHROOM1-201ENST00000319854 IGFBP1P08833 259 aaPredicted RBP14.67□□□□□ -0.06
SHROOM1-201ENST00000319854 SSR2P43308 183 aa14.67□□□□□ -0.06
SHROOM1-201ENST00000319854 MAN2A2P49641 1150 aa14.67□□□□□ -0.06
SHROOM1-201ENST00000319854 DSTNP60981 165 aa14.67□□□□□ -0.06
SHROOM1-201ENST00000319854 SGCGQ13326 291 aa14.67□□□□□ -0.06
SHROOM1-201ENST00000319854 QPRTQ15274 297 aa14.67□□□□□ -0.06
SHROOM1-201ENST00000319854 WDR53Q7Z5U6 358 aaPredicted RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms