RNA–Protein interactions for RNA: ENST00000318438.6

SYCN-201, Transcript of syncollin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCN, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCN-201ENST00000318438 ELAVL1Q15717 326 aaKnown RBP12.04□□□□□ -0.48
SYCN-201ENST00000318438 CLEC12BQ2HXU8 276 aa12.04□□□□□ -0.48
SYCN-201ENST00000318438 ZCCHC7Q8N3Z6 543 aaKnown RBP12.04□□□□□ -0.48
SYCN-201ENST00000318438 C9orf106Q8NAJ2 232 aa12.04□□□□□ -0.48
SYCN-201ENST00000318438 MBD3L2Q8NHZ7 208 aaPredicted RBP12.04□□□□□ -0.48
SYCN-201ENST00000318438 ZNF483Q8TF39 744 aaPredicted RBP12.04□□□□□ -0.48
SYCN-201ENST00000318438 SGCZQ96LD1 299 aa12.04□□□□□ -0.48
SYCN-201ENST00000318438 MAPKAP1Q9BPZ7 522 aa12.04□□□□□ -0.48
SYCN-201ENST00000318438 ZNF717Q9BY31 904 aaPredicted RBP12.04□□□□□ -0.48
SYCN-201ENST00000318438 ANKZF1Q9H8Y5 726 aa12.04□□□□□ -0.48
SYCN-201ENST00000318438 ACKR4Q9NPB9 350 aa12.04□□□□□ -0.48
SYCN-201ENST00000318438 ADAP2Q9NPF8 381 aa12.04□□□□□ -0.48
SYCN-201ENST00000318438 ZNF701Q9NV72 531 aaPredicted RBP12.04□□□□□ -0.48
SYCN-201ENST00000318438 MS4A12Q9NXJ0 267 aa12.04□□□□□ -0.48
SYCN-201ENST00000318438 TMEM216Q9P0N5 145 aa12.04□□□□□ -0.48
SYCN-201ENST00000318438 TBK1Q9UHD2 729 aa12.04□□□□□ -0.48
SYCN-201ENST00000318438 WIF1Q9Y5W5 379 aa12.04□□□□□ -0.48
SYCN-201ENST00000318438 GOLGA8RI6L899 631 aa12.03□□□□□ -0.48
SYCN-201ENST00000318438 ZNF500O60304 480 aaPredicted RBP12.03□□□□□ -0.48
SYCN-201ENST00000318438 SEMA3DO95025 777 aa12.03□□□□□ -0.48
SYCN-201ENST00000318438 SHBGP04278 402 aa12.03□□□□□ -0.48
SYCN-201ENST00000318438 HERVK_113P63132 956 aa12.03□□□□□ -0.48
SYCN-201ENST00000318438 KCNJ2P63252 427 aa12.03□□□□□ -0.48
SYCN-201ENST00000318438 SERTAD2Q14140 314 aa12.03□□□□□ -0.48
SYCN-201ENST00000318438 RASA2Q15283 850 aa12.03□□□□□ -0.48
SYCN-201ENST00000318438 PRAMEF20Q5VT98 475 aa12.03□□□□□ -0.48
SYCN-201ENST00000318438 FRG2Q64ET8 278 aa12.03□□□□□ -0.48
SYCN-201ENST00000318438 PLEKHM3Q6ZWE6 761 aa12.03□□□□□ -0.48
SYCN-201ENST00000318438 CLNKQ7Z7G1 428 aa12.03□□□□□ -0.48
SYCN-201ENST00000318438 TDRPQ86YL5 185 aa12.03□□□□□ -0.48
SYCN-201ENST00000318438 LRRC25Q8N386 305 aaPredicted RBP12.03□□□□□ -0.48
SYCN-201ENST00000318438 C7orf57Q8NEG2 295 aa12.03□□□□□ -0.48
SYCN-201ENST00000318438 OR4F6Q8NGB9 312 aa12.03□□□□□ -0.48
SYCN-201ENST00000318438 WFIKKN1Q96NZ8 548 aa12.03□□□□□ -0.48
SYCN-201ENST00000318438 FRG2BQ96QU4 278 aa12.03□□□□□ -0.48
SYCN-201ENST00000318438 SORBS1Q9BX66 1292 aaKnown RBP12.03□□□□□ -0.48
SYCN-201ENST00000318438 ERVK-6Q9BXR3 956 aa12.03□□□□□ -0.48
SYCN-201ENST00000318438 ZFP64Q9NPA5 681 aa12.03□□□□□ -0.48
SYCN-201ENST00000318438 PHF11Q9UIL8 331 aa12.03□□□□□ -0.48
SYCN-201ENST00000318438 CAMK2AQ9UQM7 478 aa12.03□□□□□ -0.48
SYCN-201ENST00000318438 NCKAP5O14513 1909 aa12.03□□□□□ -0.48
SYCN-201ENST00000318438 CD8B2A6NJW9 211 aa12.02□□□□□ -0.49
SYCN-201ENST00000318438 SNPHO15079 494 aa12.02□□□□□ -0.49
SYCN-201ENST00000318438 GLRA3O75311 464 aa12.02□□□□□ -0.49
SYCN-201ENST00000318438 ETHE1O95571 254 aa12.02□□□□□ -0.49
SYCN-201ENST00000318438 PYGBP11216 843 aa12.02□□□□□ -0.49
SYCN-201ENST00000318438 CPN2P22792 545 aa12.02□□□□□ -0.49
SYCN-201ENST00000318438 ATP5F1P24539 256 aaPredicted RBP12.02□□□□□ -0.49
SYCN-201ENST00000318438 CPOXP36551 454 aa12.02□□□□□ -0.49
SYCN-201ENST00000318438 NEK2P51955 445 aa12.02□□□□□ -0.49
SYCN-201ENST00000318438 TNFRSF17Q02223 184 aa12.02□□□□□ -0.49
SYCN-201ENST00000318438 STX4Q12846 297 aa12.02□□□□□ -0.49
SYCN-201ENST00000318438 SLAMF1Q13291 335 aa12.02□□□□□ -0.49
SYCN-201ENST00000318438 ZNF678Q5SXM1 525 aa12.02□□□□□ -0.49
SYCN-201ENST00000318438 TTC19Q6DKK2 380 aaPredicted RBP12.02□□□□□ -0.49
SYCN-201ENST00000318438 HSDL2Q6YN16 418 aa12.02□□□□□ -0.49
SYCN-201ENST00000318438 RPS27LQ71UM5 84 aaKnown RBP12.02□□□□□ -0.49
SYCN-201ENST00000318438 MILR1Q7Z6M3 343 aa12.02□□□□□ -0.49
SYCN-201ENST00000318438 GPR180Q86V85 440 aa12.02□□□□□ -0.49
SYCN-201ENST00000318438 NUDT13Q86X67 352 aa12.02□□□□□ -0.49
SYCN-201ENST00000318438 SLC22A9Q8IVM8 553 aa12.02□□□□□ -0.49
SYCN-201ENST00000318438 PM20D2Q8IYS1 436 aa12.02□□□□□ -0.49
SYCN-201ENST00000318438 TMEM132CQ8N3T6 1108 aa12.02□□□□□ -0.49
SYCN-201ENST00000318438 ZNF321PQ8N8H1 164 aa12.02□□□□□ -0.49
SYCN-201ENST00000318438 ZNF441Q8N8Z8 693 aa12.02□□□□□ -0.49
SYCN-201ENST00000318438 MORN4Q8NDC4 146 aa12.02□□□□□ -0.49
SYCN-201ENST00000318438 TMEM171Q8WVE6 324 aa12.02□□□□□ -0.49
SYCN-201ENST00000318438 DAZLQ92904 295 aaKnown RBP12.02□□□□□ -0.49
SYCN-201ENST00000318438 ZBED6CLQ96FA7 236 aaPredicted RBP12.02□□□□□ -0.49
SYCN-201ENST00000318438 JSRP1Q96MG2 331 aaPredicted RBP12.02□□□□□ -0.49
SYCN-201ENST00000318438 TMEM237Q96Q45 408 aa12.02□□□□□ -0.49
SYCN-201ENST00000318438 SERPINI1Q99574 410 aa12.02□□□□□ -0.49
SYCN-201ENST00000318438 ALOXE3Q9BYJ1 711 aa12.02□□□□□ -0.49
SYCN-201ENST00000318438 PRDM14Q9GZV8 571 aa12.02□□□□□ -0.49
SYCN-201ENST00000318438 ELOVL6Q9H5J4 265 aa12.02□□□□□ -0.49
SYCN-201ENST00000318438 DDX31Q9H8H2 851 aaKnown RBP12.02□□□□□ -0.49
SYCN-201ENST00000318438 LYARQ9NX58 379 aaKnown RBP12.02□□□□□ -0.49
SYCN-201ENST00000318438 VTI1BQ9UEU0 232 aa12.02□□□□□ -0.49
SYCN-201ENST00000318438 DCDC2Q9UHG0 476 aa12.02□□□□□ -0.49
SYCN-201ENST00000318438 CDC42EP3Q9UKI2 254 aa12.02□□□□□ -0.49
SYCN-201ENST00000318438 BOKQ9UMX3 212 aaPredicted RBP12.02□□□□□ -0.49
SYCN-201ENST00000318438 CLCA3PQ9Y6N3 262 aa12.02□□□□□ -0.49
SYCN-201ENST00000318438 CR1P17927 2039 aa12.02□□□□□ -0.49
SYCN-201ENST00000318438 RAI1Q7Z5J4 1906 aaPredicted RBP12.01□□□□□ -0.49
SYCN-201ENST00000318438 EXPH5Q8NEV8 1989 aa12.01□□□□□ -0.49
SYCN-201ENST00000318438 A0A0A6YYD5 115 aa12.01□□□□□ -0.49
SYCN-201ENST00000318438 DLX3O60479 287 aa12.01□□□□□ -0.49
SYCN-201ENST00000318438 LDB3O75112 727 aa12.01□□□□□ -0.49
SYCN-201ENST00000318438 LRATO95237 230 aa12.01□□□□□ -0.49
SYCN-201ENST00000318438 IFNA16P05015 189 aa12.01□□□□□ -0.49
SYCN-201ENST00000318438 TLX1P31314 330 aaPredicted RBP12.01□□□□□ -0.49
SYCN-201ENST00000318438 BSGP35613 385 aa12.01□□□□□ -0.49
SYCN-201ENST00000318438 BUD31P41223 144 aaPredicted RBP12.01□□□□□ -0.49
SYCN-201ENST00000318438 MC3RP41968 323 aa12.01□□□□□ -0.49
SYCN-201ENST00000318438 SLCO1A2P46721 670 aa12.01□□□□□ -0.49
SYCN-201ENST00000318438 CDH13P55290 713 aa12.01□□□□□ -0.49
SYCN-201ENST00000318438 HNRNPH2P55795 449 aaKnown RBP12.01□□□□□ -0.49
SYCN-201ENST00000318438 VSNL1P62760 191 aa12.01□□□□□ -0.49
SYCN-201ENST00000318438 IGLV3-21P80748 117 aaPredicted RBP12.01□□□□□ -0.49
SYCN-201ENST00000318438 CLCQ05315 142 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms